RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 OR52M1Q8NGK5 317 aa15.32■□□□□ 0.04
TRAF3IP1-201ENST00000373327 TMEM9BQ9NQ34 198 aa15.32■□□□□ 0.04
TRAF3IP1-201ENST00000373327 DEPPQ9NTK1 212 aa15.32■□□□□ 0.04
TRAF3IP1-201ENST00000373327 PLCE1Q9P212 2302 aa15.32■□□□□ 0.04
TRAF3IP1-201ENST00000373327 MUC1P15941 1255 aaPredicted RBP15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 ALDH3B1P43353 468 aa15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 FGF8P55075 233 aaPredicted RBP15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 GNG3P63215 75 aa15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 FAM24BQ8N5W8 94 aa15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 SF3B5Q9BWJ5 86 aaKnown RBP15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 H0YIZ8 118 aa15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 GPR137BO60478 399 aa15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 TPPPO94811 219 aa15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 PTGDSP41222 190 aa15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 CST9LP1Q5W188 147 aa15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 OR2C3Q8N628 320 aa15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 NECAP1Q8NC96 275 aa15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 MSL2Q9HCI7 577 aa15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 C19orf12Q9NSK7 152 aa15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 NPBWR1P48145 328 aa15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 CEBPDP49716 269 aaPredicted RBP15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 ZNF154Q13106 437 aa15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 OVCH2Q7RTZ1 564 aa15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 ENY2Q9NPA8 101 aa15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 MMP26Q9NRE1 261 aa15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 PRF1P14222 555 aa15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 SRPXP78539 464 aa15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 LIAT1Q6ZQX7 453 aa15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 RNF166Q96A37 237 aaPredicted RBP15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 S100PBPQ96BU1 408 aa15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 PLEKHF2Q9H8W4 249 aa15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 CACNG5Q9UF02 275 aa15.31■□□□□ 0.04
TRAF3IP1-201ENST00000373327 PINLYPA6NC86 204 aa15.3■□□□□ 0.04
TRAF3IP1-201ENST00000373327 MPPED1O15442 326 aa15.3■□□□□ 0.04
TRAF3IP1-201ENST00000373327 IFNA10P01566 189 aa15.3■□□□□ 0.04
TRAF3IP1-201ENST00000373327 IFNA4P05014 189 aa15.3■□□□□ 0.04
TRAF3IP1-201ENST00000373327 SLC25A4P12235 298 aa15.3■□□□□ 0.04
TRAF3IP1-201ENST00000373327 ANOS1P23352 680 aa15.3■□□□□ 0.04
TRAF3IP1-201ENST00000373327 CEACAM6P40199 344 aa15.3■□□□□ 0.04
TRAF3IP1-201ENST00000373327 FAM3AP98173 230 aa15.3■□□□□ 0.04
TRAF3IP1-201ENST00000373327 CXorf66Q5JRM2 361 aaPredicted RBP15.3■□□□□ 0.04
TRAF3IP1-201ENST00000373327 BTNL3Q6UXE8 466 aa15.3■□□□□ 0.04
TRAF3IP1-201ENST00000373327 CLDN23Q96B33 292 aa15.3■□□□□ 0.04
TRAF3IP1-201ENST00000373327 RSRP1Q9BUV0 290 aa15.3■□□□□ 0.04
TRAF3IP1-201ENST00000373327 OR2J1Q9GZK6 312 aa15.3■□□□□ 0.04
TRAF3IP1-201ENST00000373327 CHST1O43916 411 aa15.3■□□□□ 0.04
TRAF3IP1-201ENST00000373327 LPAR6P43657 344 aa15.3■□□□□ 0.04
TRAF3IP1-201ENST00000373327 ERGIC1Q969X5 290 aa15.3■□□□□ 0.04
TRAF3IP1-201ENST00000373327 SLC39A9Q9NUM3 307 aa15.3■□□□□ 0.04
TRAF3IP1-201ENST00000373327 SRSF3P84103 164 aaKnown RBP15.3■□□□□ 0.04
TRAF3IP1-201ENST00000373327 ZNF273Q14593 569 aa15.3■□□□□ 0.04
TRAF3IP1-201ENST00000373327 ASB13Q8WXK3 278 aa15.3■□□□□ 0.04
TRAF3IP1-201ENST00000373327 LNP1A1A4G5 178 aa15.29■□□□□ 0.04
TRAF3IP1-201ENST00000373327 MBPP02686 304 aaPredicted RBP15.29■□□□□ 0.04
TRAF3IP1-201ENST00000373327 RTBDNQ9BSG5 229 aaPredicted RBP15.29■□□□□ 0.04
TRAF3IP1-201ENST00000373327 GFOD1Q9NXC2 390 aa15.29■□□□□ 0.04
TRAF3IP1-201ENST00000373327 RBM11P57052 281 aaKnown RBP15.29■□□□□ 0.04
TRAF3IP1-201ENST00000373327 FAM166AQ6J272 317 aa15.29■□□□□ 0.04
TRAF3IP1-201ENST00000373327 Q96M66 194 aa15.29■□□□□ 0.04
TRAF3IP1-201ENST00000373327 SH3BGRL3Q9H299 93 aa15.29■□□□□ 0.04
TRAF3IP1-201ENST00000373327 NDUFA6P56556 154 aa15.29■□□□□ 0.04
TRAF3IP1-201ENST00000373327 ZNF826PQ6ZT77 177 aa15.29■□□□□ 0.04
TRAF3IP1-201ENST00000373327 NUFIP2Q7Z417 695 aaKnown RBP15.29■□□□□ 0.04
TRAF3IP1-201ENST00000373327 PHYHIPLQ96FC7 376 aa15.29■□□□□ 0.04
TRAF3IP1-201ENST00000373327 ZNF107Q9UII5 783 aaPredicted RBP15.29■□□□□ 0.04
TRAF3IP1-201ENST00000373327 HOXD4P09016 255 aaPredicted RBP15.29■□□□□ 0.04
TRAF3IP1-201ENST00000373327 ADIRFQ15847 76 aa15.29■□□□□ 0.04
TRAF3IP1-201ENST00000373327 MDP1Q86V88 176 aa15.29■□□□□ 0.04
TRAF3IP1-201ENST00000373327 MRGPRDQ8TDS7 321 aa15.29■□□□□ 0.04
TRAF3IP1-201ENST00000373327 ACTL6AO96019 429 aa15.28■□□□□ 0.04
TRAF3IP1-201ENST00000373327 OR3A1P47881 315 aa15.28■□□□□ 0.04
TRAF3IP1-201ENST00000373327 TMEM230Q96A57 120 aa15.28■□□□□ 0.04
TRAF3IP1-201ENST00000373327 ZNF552Q9H707 407 aaPredicted RBP15.28■□□□□ 0.04
TRAF3IP1-201ENST00000373327 SH2D1BO14796 132 aa15.28■□□□□ 0.04
TRAF3IP1-201ENST00000373327 HIST2H3PS2Q5TEC6 136 aa15.28■□□□□ 0.04
TRAF3IP1-201ENST00000373327 ETV3LQ6ZN32 361 aa15.28■□□□□ 0.04
TRAF3IP1-201ENST00000373327 RPUSD4Q96CM3 377 aaKnown RBP15.28■□□□□ 0.04
TRAF3IP1-201ENST00000373327 NIPSNAP3BQ9BS92 247 aa15.28■□□□□ 0.04
TRAF3IP1-201ENST00000373327 PSENENQ9NZ42 101 aa15.28■□□□□ 0.04
TRAF3IP1-201ENST00000373327 KPTNQ9Y664 436 aa15.28■□□□□ 0.04
TRAF3IP1-201ENST00000373327 DENND4AQ7Z401 1863 aa15.28■□□□□ 0.04
TRAF3IP1-201ENST00000373327 NKX2-8O15522 239 aa15.28■□□□□ 0.04
TRAF3IP1-201ENST00000373327 OR2C1O95371 312 aa15.28■□□□□ 0.04
TRAF3IP1-201ENST00000373327 DYNLT3P51808 116 aa15.28■□□□□ 0.04
TRAF3IP1-201ENST00000373327 SNRPEP62304 92 aaKnown RBP15.28■□□□□ 0.04
TRAF3IP1-201ENST00000373327 ZNF345Q14585 488 aa15.28■□□□□ 0.04
TRAF3IP1-201ENST00000373327 MRGPRFQ96AM1 343 aa15.28■□□□□ 0.04
TRAF3IP1-201ENST00000373327 hCG_1809904A0A1W2PP81 198 aa15.27■□□□□ 0.04
TRAF3IP1-201ENST00000373327 A0A1W2PR64 198 aa15.27■□□□□ 0.04
TRAF3IP1-201ENST00000373327 A0A1W2PRV1 198 aa15.27■□□□□ 0.04
TRAF3IP1-201ENST00000373327 OPA3Q9H6K4 179 aa15.27■□□□□ 0.04
TRAF3IP1-201ENST00000373327 UBE2L5PA0A1B0GUS4 154 aa15.27■□□□□ 0.04
TRAF3IP1-201ENST00000373327 KCNJ3P48549 501 aa15.27■□□□□ 0.04
TRAF3IP1-201ENST00000373327 MECP2P51608 486 aaKnown RBP15.27■□□□□ 0.04
TRAF3IP1-201ENST00000373327 FADS6Q8N9I5 356 aa15.27■□□□□ 0.04
TRAF3IP1-201ENST00000373327 HEYLQ9NQ87 328 aaPredicted RBP15.27■□□□□ 0.04
TRAF3IP1-201ENST00000373327 ZNF83P51522 516 aa15.27■□□□□ 0.03
TRAF3IP1-201ENST00000373327 CPEB3Q8NE35 698 aaKnown RBP15.27■□□□□ 0.03
TRAF3IP1-201ENST00000373327 FRZBQ92765 325 aa15.27■□□□□ 0.03
TRAF3IP1-201ENST00000373327 UNKLQ9H9P5 680 aaKnown RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms