RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 OR2M5A3KFT3 312 aa13.98□□□□□ -0.17
COL17A1-202ENST00000369733 PAGE4O60829 102 aa13.98□□□□□ -0.17
COL17A1-202ENST00000369733 DMWDQ09019 674 aa13.98□□□□□ -0.17
COL17A1-202ENST00000369733 AQP3Q92482 292 aa13.98□□□□□ -0.17
COL17A1-202ENST00000369733 BOD1Q96IK1 185 aa13.98□□□□□ -0.17
COL17A1-202ENST00000369733 GPX7Q96SL4 187 aaPredicted RBP13.98□□□□□ -0.17
COL17A1-202ENST00000369733 A0A1W2PR80 420 aa13.98□□□□□ -0.17
COL17A1-202ENST00000369733 A8MXK9 166 aa13.98□□□□□ -0.17
COL17A1-202ENST00000369733 BCL3P20749 454 aa13.98□□□□□ -0.17
COL17A1-202ENST00000369733 DHRS7BQ6IAN0 325 aaPredicted RBP13.98□□□□□ -0.17
COL17A1-202ENST00000369733 ZNF576Q9H609 170 aa13.98□□□□□ -0.17
COL17A1-202ENST00000369733 ZNF253O75346 499 aa13.97□□□□□ -0.17
COL17A1-202ENST00000369733 OR1L6Q8NGR2 347 aa13.97□□□□□ -0.17
COL17A1-202ENST00000369733 TIMM9Q9Y5J7 89 aa13.97□□□□□ -0.17
COL17A1-202ENST00000369733 ZNFX1Q9P2E3 1918 aaKnown RBP13.97□□□□□ -0.17
COL17A1-202ENST00000369733 PQLC2LA1A4F0 135 aa13.97□□□□□ -0.17
COL17A1-202ENST00000369733 MEX3AA1L020 520 aaKnown RBP13.97□□□□□ -0.17
COL17A1-202ENST00000369733 PMS2P1A4D2B8 440 aa13.97□□□□□ -0.17
COL17A1-202ENST00000369733 TMEM255AQ5JRV8 349 aa13.97□□□□□ -0.17
COL17A1-202ENST00000369733 SLC35E3Q7Z769 313 aa13.97□□□□□ -0.17
COL17A1-202ENST00000369733 MRPL30Q8TCC3 161 aaKnown RBP13.97□□□□□ -0.17
COL17A1-202ENST00000369733 PAPPA2Q9BXP8 1791 aa13.97□□□□□ -0.17
COL17A1-202ENST00000369733 FBP1P09467 338 aa13.97□□□□□ -0.17
COL17A1-202ENST00000369733 P2RY4P51582 365 aa13.97□□□□□ -0.17
COL17A1-202ENST00000369733 RUNX1Q01196 453 aa13.97□□□□□ -0.17
COL17A1-202ENST00000369733 M1APQ8TC57 530 aa13.97□□□□□ -0.17
COL17A1-202ENST00000369733 LPAR5Q9H1C0 372 aa13.97□□□□□ -0.17
COL17A1-202ENST00000369733 BCL2P10415 239 aa13.97□□□□□ -0.17
COL17A1-202ENST00000369733 OR3A1P47881 315 aa13.97□□□□□ -0.17
COL17A1-202ENST00000369733 ANKRD55Q3KP44 614 aa13.97□□□□□ -0.17
COL17A1-202ENST00000369733 ZNF385CQ66K41 422 aaPredicted RBP13.97□□□□□ -0.17
COL17A1-202ENST00000369733 IGHV3-43A0A0B4J1X8 118 aa13.97□□□□□ -0.17
COL17A1-202ENST00000369733 CYB5R3P00387 301 aaPredicted RBP13.97□□□□□ -0.17
COL17A1-202ENST00000369733 IGHV3-43DP0DP04 118 aa13.97□□□□□ -0.17
COL17A1-202ENST00000369733 PNLIPP16233 465 aa13.97□□□□□ -0.17
COL17A1-202ENST00000369733 OR5I1Q13606 314 aa13.97□□□□□ -0.17
COL17A1-202ENST00000369733 C19orf35Q6ZS72 473 aa13.97□□□□□ -0.17
COL17A1-202ENST00000369733 H1FOOQ8IZA3 346 aaPredicted RBP13.97□□□□□ -0.17
COL17A1-202ENST00000369733 OR10D3Q8NH80 312 aa13.97□□□□□ -0.17
COL17A1-202ENST00000369733 HIST1H2BAQ96A08 127 aa13.97□□□□□ -0.17
COL17A1-202ENST00000369733 SLC7A10Q9NS82 523 aa13.97□□□□□ -0.17
COL17A1-202ENST00000369733 TRGV10A0A0A0MS01 117 aa13.96□□□□□ -0.17
COL17A1-202ENST00000369733 M0R1B8 84 aa13.96□□□□□ -0.17
COL17A1-202ENST00000369733 CRYAAP02489 173 aa13.96□□□□□ -0.17
COL17A1-202ENST00000369733 NGFRP08138 427 aa13.96□□□□□ -0.17
COL17A1-202ENST00000369733 GLULP15104 373 aa13.96□□□□□ -0.17
COL17A1-202ENST00000369733 KLK2P20151 261 aa13.96□□□□□ -0.17
COL17A1-202ENST00000369733 ELOVL1Q9BW60 279 aa13.96□□□□□ -0.17
COL17A1-202ENST00000369733 SH2D2AQ9NP31 389 aa13.96□□□□□ -0.17
COL17A1-202ENST00000369733 PAM16Q9Y3D7 125 aa13.96□□□□□ -0.17
COL17A1-202ENST00000369733 A0A1B0GU03 582 aa13.96□□□□□ -0.17
COL17A1-202ENST00000369733 ALKBH6Q3KRA9 238 aa13.96□□□□□ -0.17
COL17A1-202ENST00000369733 BTNL3Q6UXE8 466 aa13.96□□□□□ -0.17
COL17A1-202ENST00000369733 TMEM92Q6UXU6 159 aa13.96□□□□□ -0.17
COL17A1-202ENST00000369733 GABRG3Q99928 467 aa13.96□□□□□ -0.17
COL17A1-202ENST00000369733 M0R2Z0 102 aa13.96□□□□□ -0.17
COL17A1-202ENST00000369733 RPS4Y1P22090 263 aaKnown RBP13.96□□□□□ -0.17
COL17A1-202ENST00000369733 ID4P47928 161 aa13.96□□□□□ -0.17
COL17A1-202ENST00000369733 COL19A1Q14993 1142 aa13.96□□□□□ -0.17
COL17A1-202ENST00000369733 GNB4Q9HAV0 340 aa13.96□□□□□ -0.17
COL17A1-202ENST00000369733 PROCRQ9UNN8 238 aa13.96□□□□□ -0.17
COL17A1-202ENST00000369733 ASCC3Q8N3C0 2202 aaKnown RBP13.96□□□□□ -0.18
COL17A1-202ENST00000369733 LINC01387J3KSC0 135 aa13.96□□□□□ -0.18
COL17A1-202ENST00000369733 CEBPEQ15744 281 aa13.96□□□□□ -0.18
COL17A1-202ENST00000369733 CPEB3Q8NE35 698 aaKnown RBP13.96□□□□□ -0.18
COL17A1-202ENST00000369733 DTD1Q8TEA8 209 aa13.96□□□□□ -0.18
COL17A1-202ENST00000369733 MRGPRFQ96AM1 343 aa13.96□□□□□ -0.18
COL17A1-202ENST00000369733 HES4Q9HCC6 221 aa13.96□□□□□ -0.18
COL17A1-202ENST00000369733 PDE6DO43924 150 aa13.95□□□□□ -0.18
COL17A1-202ENST00000369733 CLEC3BP05452 202 aa13.95□□□□□ -0.18
COL17A1-202ENST00000369733 FCARP24071 287 aa13.95□□□□□ -0.18
COL17A1-202ENST00000369733 TCL1AP56279 114 aa13.95□□□□□ -0.18
COL17A1-202ENST00000369733 FAM3BP58499 235 aaPredicted RBP13.95□□□□□ -0.18
COL17A1-202ENST00000369733 PTCRAQ6ISU1 281 aaPredicted RBP13.95□□□□□ -0.18
COL17A1-202ENST00000369733 BARX1Q9HBU1 254 aaPredicted RBP13.95□□□□□ -0.18
COL17A1-202ENST00000369733 OR5B21A6NL26 309 aa13.95□□□□□ -0.18
COL17A1-202ENST00000369733 SLC25A5P05141 298 aaKnown RBP13.95□□□□□ -0.18
COL17A1-202ENST00000369733 MMP9P14780 707 aa13.95□□□□□ -0.18
COL17A1-202ENST00000369733 ROM1Q03395 351 aa13.95□□□□□ -0.18
COL17A1-202ENST00000369733 ELOBQ15370 118 aa13.95□□□□□ -0.18
COL17A1-202ENST00000369733 C1orf100Q5SVJ3 147 aa13.95□□□□□ -0.18
COL17A1-202ENST00000369733 TBX15Q96SF7 602 aa13.95□□□□□ -0.18
COL17A1-202ENST00000369733 KCNE5Q9UJ90 142 aa13.95□□□□□ -0.18
COL17A1-202ENST00000369733 A0A1W2PP11 408 aa13.95□□□□□ -0.18
COL17A1-202ENST00000369733 CAMPP49913 170 aa13.95□□□□□ -0.18
COL17A1-202ENST00000369733 TIPARPQ7Z3E1 657 aaKnown RBP13.95□□□□□ -0.18
COL17A1-202ENST00000369733 NHLRC2Q8NBF2 726 aa13.95□□□□□ -0.18
COL17A1-202ENST00000369733 KISS1RQ969F8 398 aaPredicted RBP13.95□□□□□ -0.18
COL17A1-202ENST00000369733 GSX1Q9H4S2 264 aaPredicted RBP13.95□□□□□ -0.18
COL17A1-202ENST00000369733 PCOLCE2Q9UKZ9 415 aa13.95□□□□□ -0.18
COL17A1-202ENST00000369733 YBX2Q9Y2T7 364 aaKnown RBP13.95□□□□□ -0.18
COL17A1-202ENST00000369733 DMRT1Q9Y5R6 373 aa13.95□□□□□ -0.18
COL17A1-202ENST00000369733 TEX50A0A1B0GTY4 177 aa13.95□□□□□ -0.18
COL17A1-202ENST00000369733 CD8AP01732 235 aa13.95□□□□□ -0.18
COL17A1-202ENST00000369733 FCGR3AP08637 254 aa13.95□□□□□ -0.18
COL17A1-202ENST00000369733 DDTP30046 118 aa13.95□□□□□ -0.18
COL17A1-202ENST00000369733 DHRS11Q6UWP2 260 aa13.95□□□□□ -0.18
COL17A1-202ENST00000369733 MRGPRDQ8TDS7 321 aa13.95□□□□□ -0.18
COL17A1-202ENST00000369733 VN1R17PQ8TDU5 208 aa13.95□□□□□ -0.18
COL17A1-202ENST00000369733 STARD4Q96DR4 205 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms