RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 RPS25P62851 125 aaKnown RBP3.08□□□□□ -1.92
SMCO3-201ENST00000316048 FABP5Q01469 135 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 RPL18Q07020 188 aaKnown RBP3.08□□□□□ -1.92
SMCO3-201ENST00000316048 GGTLC2Q14390 218 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 TOMM34Q15785 309 aaPredicted RBP3.08□□□□□ -1.92
SMCO3-201ENST00000316048 TRIM16LQ309B1 348 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 CCDC58Q4VC31 144 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 C1orf140Q5VVS0 124 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 RPL22L1Q6P5R6 122 aaKnown RBP3.08□□□□□ -1.92
SMCO3-201ENST00000316048 CD200R1LQ6Q8B3 271 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 OPN5Q6U736 354 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 PLEKHG7Q6ZR37 379 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 TPRA1Q86W33 373 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 SLC35F2Q8IXU6 374 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 ZFP41Q8N8Y5 198 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 LRRC75AQ8NAA5 344 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 OR1L4Q8NGR5 311 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 OR6K6Q8NGW6 343 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 OR5J2Q8NH18 312 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 NEIL3Q8TAT5 605 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 HGDQ93099 445 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 C8orf44Q96CB5 159 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 ZMYND19Q96E35 227 aaPredicted RBP3.08□□□□□ -1.92
SMCO3-201ENST00000316048 Q96M85 177 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 CITED1Q99966 193 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 ZNF649Q9BS31 505 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 TMED9Q9BVK6 235 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 OPN3Q9H1Y3 402 aaPredicted RBP3.08□□□□□ -1.92
SMCO3-201ENST00000316048 PTGES2Q9H7Z7 377 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 ISG20L2Q9H9L3 353 aaKnown RBP3.08□□□□□ -1.92
SMCO3-201ENST00000316048 INIPQ9NRY2 104 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 PPIAL4AQ9Y536 164 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 TMEM14AQ9Y6G1 99 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 TRIOBPQ9H2D6 2365 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 COL5A1P20908 1838 aaPredicted RBP3.08□□□□□ -1.92
SMCO3-201ENST00000316048 UNC13CQ8NB66 2214 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 IGHV1-45A0A0A0MS14 117 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 NSG1A0A0A6YYJ2 146 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 ZNF705EA8MWA4 302 aaPredicted RBP3.08□□□□□ -1.92
SMCO3-201ENST00000316048 HSBP1L1C9JCN9 74 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 E9PLD3 99 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 PHYHO14832 338 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 NPIPB7O75200 414 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 CBR3O75828 277 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 UPK1BO75841 260 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 SULT1C4O75897 302 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 OR2J2O76002 312 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 LALBAP00709 142 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 APOA1P02647 267 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 GRPRP30550 384 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 CD79BP40259 229 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 EIF1P41567 113 aaKnown RBP3.08□□□□□ -1.92
SMCO3-201ENST00000316048 OR12D2P58182 307 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 POLR2GP62487 172 aaKnown RBP eCLIP3.08□□□□□ -1.92
SMCO3-201ENST00000316048 RPS15P62841 145 aaKnown RBP3.08□□□□□ -1.92
SMCO3-201ENST00000316048 OR5M10Q6IEU7 315 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 OR2A2Q6IF42 318 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 ARL9Q6T311 187 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 C16orf47Q6ZP98 133 aaPredicted RBP3.08□□□□□ -1.92
SMCO3-201ENST00000316048 NDUFAF7Q7L592 441 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 FAM122BQ7Z309 247 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 FAM220AQ7Z4H9 259 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 RPS19BP1Q86WX3 136 aaKnown RBP3.08□□□□□ -1.92
SMCO3-201ENST00000316048 MARCH9Q86YJ5 346 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 POM121L12Q8N7R1 296 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 ARIH2OSQ8N7S6 290 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 OR10A7Q8NGE5 316 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 OR51L1Q8NGJ5 315 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 OR2Y1Q8NGV0 311 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 MFSD8Q8NHS3 518 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 VN1R17PQ8TDU5 208 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 GTSF1Q8WW33 167 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 ACOT12Q8WYK0 555 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 RASD2Q96D21 266 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 TIMD4Q96H15 378 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 IMMP1LQ96LU5 166 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 CCDC32Q9BV29 185 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 MROQ9BYG7 248 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 POTEKPQ9BYX7 375 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 TXNIPQ9H3M7 391 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 ABCB10Q9NRK6 738 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 CLEC5AQ9NY25 188 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 TAS2R5Q9NYW4 299 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 MED11Q9P086 117 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 EMC3Q9P0I2 261 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 NPIPA1Q9UND3 350 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 PIGLQ9Y2B2 252 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 YARS2Q9Y2Z4 477 aaKnown RBP3.08□□□□□ -1.92
SMCO3-201ENST00000316048 SZT2Q5T011 3432 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 IGKV3D-15A0A087WSY6 115 aa3.07□□□□□ -1.92
SMCO3-201ENST00000316048 IGLV3-32A0A0A0MS00 114 aa3.07□□□□□ -1.92
SMCO3-201ENST00000316048 LOC100131303A0A0U1RQF7 123 aa3.07□□□□□ -1.92
SMCO3-201ENST00000316048 A0A1W2PNV4 684 aa3.07□□□□□ -1.92
SMCO3-201ENST00000316048 FABP12A6NFH5 140 aa3.07□□□□□ -1.92
SMCO3-201ENST00000316048 A6NIZ1 184 aa3.07□□□□□ -1.92
SMCO3-201ENST00000316048 PLPP3O14495 311 aa3.07□□□□□ -1.92
SMCO3-201ENST00000316048 SULT1B1O43704 296 aa3.07□□□□□ -1.92
SMCO3-201ENST00000316048 ZNF354AO60765 605 aaPredicted RBP3.07□□□□□ -1.92
SMCO3-201ENST00000316048 SLC19A2O60779 497 aa3.07□□□□□ -1.92
SMCO3-201ENST00000316048 KLF7O75840 302 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms