RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 BIVMQ86UB2 503 aa13.74□□□□□ -0.21
USP43-201ENST00000285199 MRGPRFQ96AM1 343 aa13.74□□□□□ -0.21
USP43-201ENST00000285199 NTNG2Q96CW9 530 aa13.74□□□□□ -0.21
USP43-201ENST00000285199 MVB12AQ96EY5 273 aa13.74□□□□□ -0.21
USP43-201ENST00000285199 TPPP3Q9BW30 176 aa13.74□□□□□ -0.21
USP43-201ENST00000285199 ACTR3CQ9C0K3 210 aaPredicted RBP13.74□□□□□ -0.21
USP43-201ENST00000285199 SCN8AQ9UQD0 1980 aa13.74□□□□□ -0.21
USP43-201ENST00000285199 C17orf112F2Z3M2 114 aa13.74□□□□□ -0.21
USP43-201ENST00000285199 CALCRP30988 508 aa13.74□□□□□ -0.21
USP43-201ENST00000285199 TMEM50BP56557 158 aa13.74□□□□□ -0.21
USP43-201ENST00000285199 FAM3AP98173 230 aa13.74□□□□□ -0.21
USP43-201ENST00000285199 CEBPEQ15744 281 aa13.74□□□□□ -0.21
USP43-201ENST00000285199 SLC22A18ASQ8N1D0 253 aa13.74□□□□□ -0.21
USP43-201ENST00000285199 OR10A7Q8NGE5 316 aa13.74□□□□□ -0.21
USP43-201ENST00000285199 ATP5SQ99766 215 aa13.74□□□□□ -0.21
USP43-201ENST00000285199 DOCK11Q5JSL3 2073 aa13.74□□□□□ -0.21
USP43-201ENST00000285199 PQLC2LA1A4F0 135 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 CBY3A6NI87 242 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 LMO7DNF2Z398 122 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 MS4A18H0YCH9 400 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 CST2P09228 141 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 TRGC1P0CF51 173 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 FUT6P51993 359 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 FAM3BP58499 235 aaPredicted RBP13.73□□□□□ -0.21
USP43-201ENST00000285199 MS4A18Q3C1V0 323 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 Q3ZCU0 254 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 SPSB1Q96BD6 273 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 CLCF1Q9UBD9 225 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 PRSS50Q9UI38 385 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 HDGFL3Q9Y3E1 203 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 LOC102724200A0A096LPH7 203 aaPredicted RBP13.73□□□□□ -0.21
USP43-201ENST00000285199 IGHV3-43A0A0B4J1X8 118 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 KIAA1324LA8MWY0 1029 aaPredicted RBP13.73□□□□□ -0.21
USP43-201ENST00000285199 IGHV3-43DP0DP04 118 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 COX5AP20674 150 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 SLC38A11Q08AI6 406 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 VAX1Q5SQQ9 334 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 EIF4E3Q8N5X7 224 aaKnown RBP13.73□□□□□ -0.21
USP43-201ENST00000285199 ZNF721Q8TF20 911 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 SCN5AQ14524 2016 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 F6UZH7 168 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 CER1O95813 267 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 ADCYAP1P18509 176 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 DDTP30046 118 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 TCL1AP56279 114 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 SIGLECL1Q8N7X8 197 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 DEFB108BQ8NET1 73 aa13.73□□□□□ -0.21
USP43-201ENST00000285199 CDCA3Q99618 268 aaPredicted RBP13.73□□□□□ -0.21
USP43-201ENST00000285199 DUSP15Q9H1R2 295 aaPredicted RBP13.73□□□□□ -0.21
USP43-201ENST00000285199 IGHV1OR21-1A0A087WYE8 117 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 ETFRF1Q6IPR1 90 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 CARHSP1Q9Y2V2 147 aaKnown RBP13.72□□□□□ -0.21
USP43-201ENST00000285199 LHFPL6Q9Y693 200 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 PLXND1Q9Y4D7 1925 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 PIGBOS1A0A0B4J2F0 54 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 EGR1P18146 543 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 CXCL12P48061 93 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 CASP6P55212 293 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 IQCJQ1A5X6 159 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 AGBL5Q8NDL9 886 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 SHDQ96IW2 340 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 ZNF107Q9UII5 783 aaPredicted RBP13.72□□□□□ -0.21
USP43-201ENST00000285199 PATJQ8NI35 1801 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.72□□□□□ -0.21
USP43-201ENST00000285199 LINC01387J3KSC0 135 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 OR7C2O60412 319 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 PTBP3O95758 552 aaKnown RBP13.72□□□□□ -0.21
USP43-201ENST00000285199 FSTP19883 344 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 PHYHD1Q5SRE7 291 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 FGF11Q92914 225 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 PSME4Q14997 1843 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 CADP27708 2225 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 ZNF407Q9C0G0 2248 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 OPN1MWP04001 364 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 OPN1MW2P0DN77 364 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 OPN1MW3P0DN78 364 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 ZNF17P17021 662 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 CA6P23280 308 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 ZDHHC23Q8IYP9 409 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 POC1AQ8NBT0 407 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 POC1BQ8TC44 478 aa13.72□□□□□ -0.21
USP43-201ENST00000285199 APOA2P02652 100 aa13.71□□□□□ -0.21
USP43-201ENST00000285199 PGA3P0DJD8 388 aa13.71□□□□□ -0.21
USP43-201ENST00000285199 HES3Q5TGS1 186 aa13.71□□□□□ -0.21
USP43-201ENST00000285199 GFI1BQ5VTD9 330 aa13.71□□□□□ -0.21
USP43-201ENST00000285199 SSX7Q7RTT5 188 aa13.71□□□□□ -0.21
USP43-201ENST00000285199 OR2T10Q8NGZ9 312 aa13.71□□□□□ -0.21
USP43-201ENST00000285199 OR8U8P0C7N1 319 aa13.71□□□□□ -0.21
USP43-201ENST00000285199 ZNF735P0CB33 412 aa13.71□□□□□ -0.21
USP43-201ENST00000285199 GCH1P30793 250 aa13.71□□□□□ -0.21
USP43-201ENST00000285199 CEACAM6P40199 344 aa13.71□□□□□ -0.21
USP43-201ENST00000285199 PPP1CBP62140 327 aa13.71□□□□□ -0.21
USP43-201ENST00000285199 SLC35B1P78383 322 aa13.71□□□□□ -0.21
USP43-201ENST00000285199 SMAD4Q13485 552 aaKnown RBP13.71□□□□□ -0.21
USP43-201ENST00000285199 DPPA3Q6W0C5 159 aa13.71□□□□□ -0.21
USP43-201ENST00000285199 CLDN23Q96B33 292 aa13.71□□□□□ -0.21
USP43-201ENST00000285199 FAM206AQ9NX38 181 aa13.71□□□□□ -0.21
USP43-201ENST00000285199 PCOLCE2Q9UKZ9 415 aa13.71□□□□□ -0.21
USP43-201ENST00000285199 ZDHHC8Q9ULC8 765 aa13.71□□□□□ -0.21
USP43-201ENST00000285199 MTCH2Q9Y6C9 303 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms