RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 ZNF552Q9H707 407 aaPredicted RBP4.26□□□□□ -1.73
RC3H1-201ENST00000258349 POM121BA6NF01 834 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 SRSF10O75494 262 aaKnown RBP4.26□□□□□ -1.73
RC3H1-201ENST00000258349 SRFP11831 508 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 BRS3P32247 399 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 WNT3P56703 355 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 KLF3P57682 345 aaPredicted RBP4.26□□□□□ -1.73
RC3H1-201ENST00000258349 TIAL1Q01085 375 aaKnown RBP eCLIP4.26□□□□□ -1.73
RC3H1-201ENST00000258349 KLF9Q13886 244 aaPredicted RBP4.26□□□□□ -1.73
RC3H1-201ENST00000258349 CEACAM16Q2WEN9 425 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 HFEQ30201 348 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 SP6Q3SY56 376 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 COL5A1-AS1Q5SY13 56 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 ACSM6Q6P461 480 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 IL22RA2Q969J5 263 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 C4orf45Q96LM5 186 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 CXCL16Q9H2A7 254 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 SLC7A10Q9NS82 523 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 TBX21Q9UL17 535 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 PRR14LQ5THK1 2151 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 RPL29P47914 159 aaKnown RBP4.26□□□□□ -1.73
RC3H1-201ENST00000258349 RAB32Q13637 225 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 HLA-DRB5Q30154 266 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 IGSF11Q5DX21 431 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 NSUN5P2Q63ZY6 315 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 MRGPRGQ86SM5 289 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 NFAM1Q8NET5 270 aaPredicted RBP4.26□□□□□ -1.73
RC3H1-201ENST00000258349 VSTM2AQ8TAG5 236 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 FAM117AQ9C073 453 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 CXorf65A6NEN9 183 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 EDIL3O43854 480 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 FCGR3BO75015 233 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 NKX2-2O95096 273 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 GALNSP34059 522 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 TRA2AQ13595 282 aaKnown RBP eCLIP4.26□□□□□ -1.73
RC3H1-201ENST00000258349 ZNF774Q6NX45 483 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 D2HGDHQ8N465 521 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 OR5R1Q8NH85 324 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 C8orf44Q96CB5 159 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 SLC26A1Q9H2B4 701 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 CACNA1GO43497 2377 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 TRAV34A0A0B4J273 112 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 hADV38S2A0JD32 116 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 UBE2L3P68036 154 aaKnown RBP4.25□□□□□ -1.73
RC3H1-201ENST00000258349 MRPL58Q14197 206 aaKnown RBP4.25□□□□□ -1.73
RC3H1-201ENST00000258349 SEZ6L2Q6UXD5 910 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 ATOH1Q92858 354 aaPredicted RBP4.25□□□□□ -1.73
RC3H1-201ENST00000258349 LRRC61Q9BV99 259 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 ERRFI1Q9UJM3 462 aaPredicted RBP4.25□□□□□ -1.73
RC3H1-201ENST00000258349 PSG11Q9UQ72 335 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 ZFP30Q9Y2G7 519 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 KCNE3Q9Y6H6 103 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 K7EQS6 105 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 KLF7O75840 302 aaPredicted RBP4.25□□□□□ -1.73
RC3H1-201ENST00000258349 CRHP06850 196 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 YBX1P67809 324 aaKnown RBP4.25□□□□□ -1.73
RC3H1-201ENST00000258349 DYRK2Q92630 601 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 RPEQ96AT9 228 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 OPN4Q9UHM6 478 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 OR2T8A6NH00 312 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 RER1O15258 196 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 CEACAM5P06731 702 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 PPP2CBP62714 309 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 PPP2CAP67775 309 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 C19orf57Q0VDD7 668 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 NKG7Q16617 165 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 CLEC12BQ2HXU8 276 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 TMEM65Q6PI78 240 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 HSD17B10Q99714 261 aaKnown RBP4.25□□□□□ -1.73
RC3H1-201ENST00000258349 LIPGQ9Y5X9 500 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 DSPPQ9NZW4 1301 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 MASP2O00187 686 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 OGG1O15527 345 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 DHHO43323 396 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 NGFP01138 241 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 HPXP02790 462 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 FAM87AP0C7U9 286 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 FNDC7Q5VTL7 733 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 SCGB1D4Q6XE38 83 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 ETV3LQ6ZN32 361 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 C6orf201Q7Z4U5 140 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 ZNF383Q8NA42 475 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 TMEM116Q8NCL8 245 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 LILRB1Q8NHL6 650 aaPredicted RBP4.25□□□□□ -1.73
RC3H1-201ENST00000258349 F5H697 171 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 LYZP61626 148 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 B4GALNT1Q00973 533 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 UBE2V2Q15819 145 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 TMEM211Q6ICI0 200 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 ZNF770Q6IQ21 691 aaPredicted RBP4.25□□□□□ -1.73
RC3H1-201ENST00000258349 ZNF547Q8IVP9 402 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 PTX4Q96A99 478 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 STARD4Q96DR4 205 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 PTPRBP23467 1997 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 RPL30P62888 115 aaKnown RBP4.25□□□□□ -1.73
RC3H1-201ENST00000258349 HIST3H3Q16695 136 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 ZNF793Q6ZN11 406 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 TM4SF19Q96DZ7 209 aa4.25□□□□□ -1.73
RC3H1-201ENST00000258349 PRNDQ9UKY0 176 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms