RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Gm4498K9J7G4 306 aa12.39□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Vmn1r118L7N273 306 aa12.39□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Emg1O35130 244 aaKnown RBP12.39□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Mtnd4lP03903 98 aa12.39□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Prkar2aP12367 401 aa12.39□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 SnrpnP63163 240 aaKnown RBP12.39□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 4930480E11RikQ0VG34 394 aa12.39□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Dtx3Q80V91 347 aa12.39□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Washc3Q9CR27 194 aa12.39□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 AhspQ9CY02 102 aa12.39□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Ms4a4cQ9D3F6 226 aa12.39□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Q9DAE8 263 aa12.39□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Zfp236S4R299 1847 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 SptbP15508 2128 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Nkx2-1P50220 372 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Bglap3P54615 95 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 BaxQ07813 192 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Fbxo4Q8CHQ0 385 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Lsm10Q8QZX5 122 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Rfpl4aQ8VH31 287 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 QprtQ91X91 299 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Znf524Q9D0B1 321 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Znf593Q9DB42 134 aaKnown RBP12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Mrps34Q9JIK9 218 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Apc2Q9Z1K7 2274 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Gm4177D3YTX5 305 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Plscr5J3QM92 274 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Vmn1r127K7N6J5 305 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Vmn1r115K7N6Y3 295 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Rab18P35293 206 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 LipnQ3U4B4 400 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Olfr1500Q7TQQ3 311 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Olfr1233Q8VGN0 305 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Aig1Q9D8B1 262 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Tmem38bQ9DAV9 292 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Gstk1Q9DCM2 226 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Gm12117V9GXK0 151 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Vmn1r7E9Q8T0 311 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 GamtO35969 236 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Gdf9Q07105 441 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Fam173aQ501J2 229 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Eml2Q7TNG5 649 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 C130079G13RikQ8BUY2 280 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Commd9Q8K2Q0 198 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Agpat2Q8K3K7 278 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Mmp17Q9R0S3 578 aa12.38□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 P01804 111 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 NdnP25233 325 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 F13bQ07968 669 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Fbxw20Q5U467 468 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Klf3Q60980 344 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Azgp1Q64726 307 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Lyrm2Q8R033 88 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Glb1lQ8VC60 646 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Olfr1411Q8VFC4 323 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Cd209cQ91ZW9 178 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Chek1O35280 476 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Csf2rbP26955 896 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Rps27Q6ZWU9 84 aaKnown RBP12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Znf8Q8BGV5 572 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Gm5447Q8BPB2 115 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Peli1Q8C669 418 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Fam169bQ8CHT6 337 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Olfr919Q8VF78 315 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Olfr860Q8VFF7 317 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Tmem239Q9DA47 151 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Igkv15-103A0A140T8P3 115 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Mn1D3YWE6 1297 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Gm21761J3QK00 171 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Raet1aO08602 253 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Raet1bO08603 253 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 PlauP06869 433 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Ccr2P51683 373 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Rac1P63001 192 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Kcnj3P63250 501 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Tbx6P70327 436 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Rpusd3Q14AI6 344 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Ell3Q80VR2 395 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Fam199xQ8K2D0 388 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Seh1lQ8R2U0 360 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Abhd6Q8R2Y0 336 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Mitd1Q8VDV8 249 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Olfr785A0A0N4SVC3 312 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Gm21721J3QMK7 227 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Wnt1P04426 370 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 GlulP15105 373 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Rps23P62267 143 aaKnown RBP12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 XylbQ3TNA1 551 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Tex30Q3TUU5 225 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 CthQ8VCN5 398 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Olfr99Q8VFE4 305 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Olfr410Q8VFX7 315 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Olfr402Q8VFX8 315 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Pga5Q9D106 387 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Tmbim7Q9D592 302 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Alkbh7Q9D6Z0 221 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Gm3550W4VSN7 160 aa12.37□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Olfr1410E9PYK6 323 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 BlkP16277 499 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 PpiaP17742 164 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 50.7 ms