RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Ccl4P14097 92 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 CebpbP28033 296 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Dnase1P49183 284 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Rab5bP61021 215 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Tmem69Q3KQJ0 245 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Tmem18Q3TUD9 140 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr331Q5NC44 324 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 OmgQ63912 440 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Utf1Q6J1H4 339 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Zfp663Q6NXM6 656 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Zfp429Q7M6Y0 485 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr453Q7TRV7 317 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Sult1c1Q80VR3 304 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Kiaa0895lQ810A5 467 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Edem2Q8BJT9 577 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Vmn1r193Q8R258 319 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Vmn1r212Q8R268 357 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Med25Q8VCB2 745 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Gpn1Q8VCE2 372 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Sectm1aQ921W8 192 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Rtl8bQ9D1F0 113 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Nudt22Q9DD16 308 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 FrylF8VQ05 3007 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Ighv15-2A0A0A6YX72 118 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr1532-ps1A0A0R4J8U2 307 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Fndc7A2AED3 737 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Pm20d2A3KG59 431 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr248E9Q1L6 309 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr707K7N662 307 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 S1pr1O08530 382 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Prss12O08762 761 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Cd200O54901 278 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 MgmtP26187 211 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Rpl12P35979 165 aaKnown RBP11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Dcaf7P61963 342 aaKnown RBP11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Gm826Q3UQ74 109 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Gm14851Q5ERJ0 116 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Rnf122Q8BP31 155 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Las2Q8CB14 526 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Eddm3bQ8K0E4 149 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Cbr3Q8K354 277 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Pomt1Q8R2R1 746 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr133Q8VG94 312 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr51Q8VGG9 307 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Vmn1r43Q8VIC9 329 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Armc10Q9D0L7 306 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Lysmd2Q9D7V2 215 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr957Q9EQB7 311 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Serinc1Q9QZI8 453 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Cabin1G3X8Q1 2187 aaKnown RBP11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Trav6-7-dv9A0A075B639 125 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr789A0A1L1SV77 312 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr239A0PK55 315 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Zfp69A2A761 587 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr225E9PWF9 419 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Gm37240E9QAY5 252 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr55K7N6Q1 315 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Raet1aO08602 253 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Raet1bO08603 253 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Ifitm5O88728 134 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Mdh2P08249 338 aaKnown RBP11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Sult4a1P63046 284 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 A3galt2Q3V1N9 370 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Gm527Q4KL13 310 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Foxf1Q61080 378 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Commd3Q63829 195 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 BC061237Q6P8I2 184 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Fam57bQ7TNV1 275 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr107Q7TRK4 309 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Rnf144bQ8BKD6 301 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Fam169bQ8CHT6 337 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Masp2Q91WP0 685 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Cyb5bQ9CQX2 146 aaKnown RBP11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 MrnipQ9D1F5 335 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 ApmapQ9D7N9 415 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Ergic1Q9DC16 290 aaKnown RBP11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Plekha3Q9ERS4 297 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Prl3c1Q9QUN5 212 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Syt6Q9R0N8 511 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Cx3cr1Q9Z0D9 354 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr455A0A0B4J1M2 317 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Igkv4-63A0A0G2JFU6 117 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 A0A286YDP4 300 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Dgat2l6A2ADU8 337 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Amy1P00687 511 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 HexbP20060 536 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Pax4P32115 349 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Tnfrsf4P47741 272 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Lsm5P62322 91 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 AccslQ3UX83 580 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Tas2r107Q7M725 308 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Zfp955aQ80XR7 545 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Fam124bQ8BLQ0 456 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 4930451G09RikQ8C5G4 195 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Vmn1r226Q8R2A8 298 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr1301Q8VGE7 312 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr351Q8VGK1 310 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Gjc3Q921C1 269 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Dnajb11Q99KV1 358 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Q9DAE7 121 aa11.83□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 53.5 ms