RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 IRS2Q9Y4H2 1338 aa12.78□□□□□ -0.36
PHGDH-222ENST00000641587 LAMB1P07942 1786 aa12.78□□□□□ -0.36
PHGDH-222ENST00000641587 OTOFQ9HC10 1997 aa12.78□□□□□ -0.36
PHGDH-222ENST00000641587 POTEFA5A3E0 1075 aa12.77□□□□□ -0.37
PHGDH-222ENST00000641587 IGF2BP3O00425 579 aaKnown RBP eCLIP12.77□□□□□ -0.37
PHGDH-222ENST00000641587 TAF5LO75529 589 aa12.77□□□□□ -0.37
PHGDH-222ENST00000641587 SLC4A2P04920 1241 aa12.77□□□□□ -0.37
PHGDH-222ENST00000641587 KCNJ4P48050 445 aa12.77□□□□□ -0.37
PHGDH-222ENST00000641587 TWISTNBQ3B726 338 aaPredicted RBP12.77□□□□□ -0.37
PHGDH-222ENST00000641587 PLA2G12BQ9BX93 195 aa12.77□□□□□ -0.37
PHGDH-222ENST00000641587 TRIM17Q9Y577 477 aa12.77□□□□□ -0.37
PHGDH-222ENST00000641587 COL1A1P02452 1464 aaPredicted RBP12.77□□□□□ -0.37
PHGDH-222ENST00000641587 CSF1RP07333 972 aa12.76□□□□□ -0.37
PHGDH-222ENST00000641587 GJA5P36382 358 aa12.76□□□□□ -0.37
PHGDH-222ENST00000641587 FLIIQ13045 1269 aa12.76□□□□□ -0.37
PHGDH-222ENST00000641587 DLGAP5Q15398 846 aa12.76□□□□□ -0.37
PHGDH-222ENST00000641587 OTOP1Q7RTM1 612 aa12.76□□□□□ -0.37
PHGDH-222ENST00000641587 IFNL1Q8IU54 200 aa12.76□□□□□ -0.37
PHGDH-222ENST00000641587 WNK4Q96J92 1243 aa12.76□□□□□ -0.37
PHGDH-222ENST00000641587 ANKRD2Q9GZV1 360 aa12.76□□□□□ -0.37
PHGDH-222ENST00000641587 MANSC4A6NHS7 340 aaPredicted RBP12.75□□□□□ -0.37
PHGDH-222ENST00000641587 CAP1Q01518 475 aa12.75□□□□□ -0.37
PHGDH-222ENST00000641587 CFAP100Q494V2 611 aa12.75□□□□□ -0.37
PHGDH-222ENST00000641587 NBPF12Q5TAG4 269 aaPredicted RBP12.75□□□□□ -0.37
PHGDH-222ENST00000641587 SLC10A4Q96EP9 437 aa12.75□□□□□ -0.37
PHGDH-222ENST00000641587 VEZTQ9HBM0 779 aa12.75□□□□□ -0.37
PHGDH-222ENST00000641587 ZBED9Q6R2W3 1325 aa12.74□□□□□ -0.37
PHGDH-222ENST00000641587 SPDYE2BA6NHP3 402 aa12.74□□□□□ -0.37
PHGDH-222ENST00000641587 SPDYE6P0CI01 402 aa12.74□□□□□ -0.37
PHGDH-222ENST00000641587 FKBP5Q13451 457 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-222ENST00000641587 MAP3K11Q16584 847 aa12.74□□□□□ -0.37
PHGDH-222ENST00000641587 WWC1Q8IX03 1113 aa12.74□□□□□ -0.37
PHGDH-222ENST00000641587 CD99L2Q8TCZ2 262 aa12.74□□□□□ -0.37
PHGDH-222ENST00000641587 DNAAF4Q8WXU2 420 aa12.74□□□□□ -0.37
PHGDH-222ENST00000641587 PRMT6Q96LA8 375 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-222ENST00000641587 KIAA0100Q14667 2235 aaKnown RBP12.73□□□□□ -0.37
PHGDH-222ENST00000641587 ANKRD18BA2A2Z9 1011 aa12.73□□□□□ -0.37
PHGDH-222ENST00000641587 ALDH1A1P00352 501 aa12.73□□□□□ -0.37
PHGDH-222ENST00000641587 MMP14P50281 582 aa12.73□□□□□ -0.37
PHGDH-222ENST00000641587 FOXO4P98177 505 aa12.73□□□□□ -0.37
PHGDH-222ENST00000641587 CRHR2Q13324 411 aa12.73□□□□□ -0.37
PHGDH-222ENST00000641587 CDAN1Q8IWY9 1227 aa12.73□□□□□ -0.37
PHGDH-222ENST00000641587 MTMR14Q8NCE2 650 aa12.73□□□□□ -0.37
PHGDH-222ENST00000641587 ZNF594Q96JF6 807 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-222ENST00000641587 CHMP4AQ9BY43 222 aa12.73□□□□□ -0.37
PHGDH-222ENST00000641587 MYH16Q9H6N6 1097 aa12.73□□□□□ -0.37
PHGDH-222ENST00000641587 CHMP3Q9Y3E7 222 aa12.73□□□□□ -0.37
PHGDH-222ENST00000641587 RBBP6Q7Z6E9 1792 aaKnown RBP12.73□□□□□ -0.37
PHGDH-222ENST00000641587 F6X3S4 739 aa12.72□□□□□ -0.37
PHGDH-222ENST00000641587 PPP1R12BO60237 982 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-222ENST00000641587 USP2O75604 605 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-222ENST00000641587 ZBTB48P10074 688 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-222ENST00000641587 RASA3Q14644 834 aa12.72□□□□□ -0.37
PHGDH-222ENST00000641587 EPHA10Q5JZY3 1008 aa12.72□□□□□ -0.37
PHGDH-222ENST00000641587 LINS1Q8NG48 757 aa12.72□□□□□ -0.37
PHGDH-222ENST00000641587 PTPN18Q99952 460 aa12.72□□□□□ -0.37
PHGDH-222ENST00000641587 FANCIQ9NVI1 1328 aa12.71□□□□□ -0.37
PHGDH-222ENST00000641587 CACNA1FO60840 1977 aa12.71□□□□□ -0.37
PHGDH-222ENST00000641587 PLIN1O60240 522 aa12.71□□□□□ -0.37
PHGDH-222ENST00000641587 IL1R1P14778 569 aa12.71□□□□□ -0.37
PHGDH-222ENST00000641587 RBM5P52756 815 aaKnown RBP eCLIP12.71□□□□□ -0.37
PHGDH-222ENST00000641587 IFIT5Q13325 482 aaKnown RBP12.71□□□□□ -0.37
PHGDH-222ENST00000641587 C15orf52Q6ZUT6 534 aaKnown RBP12.71□□□□□ -0.37
PHGDH-222ENST00000641587 ZNF804AQ7Z570 1209 aa12.71□□□□□ -0.37
PHGDH-222ENST00000641587 CNKSR2Q8WXI2 1034 aa12.71□□□□□ -0.37
PHGDH-222ENST00000641587 ELP3Q9H9T3 547 aa12.71□□□□□ -0.37
PHGDH-222ENST00000641587 PTPN22Q9Y2R2 807 aa12.71□□□□□ -0.37
PHGDH-222ENST00000641587 PPP2R3BQ9Y5P8 575 aa12.71□□□□□ -0.37
PHGDH-222ENST00000641587 ZSWIM8A7E2V4 1837 aa12.71□□□□□ -0.38
PHGDH-222ENST00000641587 ARAP2Q8WZ64 1704 aa12.71□□□□□ -0.38
PHGDH-222ENST00000641587 MYO1BO43795 1136 aa12.7□□□□□ -0.38
PHGDH-222ENST00000641587 CENPBP07199 599 aaPredicted RBP12.7□□□□□ -0.38
PHGDH-222ENST00000641587 EN2P19622 333 aaPredicted RBP12.7□□□□□ -0.38
PHGDH-222ENST00000641587 INHBEP58166 350 aa12.7□□□□□ -0.38
PHGDH-222ENST00000641587 CCDC27Q2M243 656 aa12.7□□□□□ -0.38
PHGDH-222ENST00000641587 LMBR1LQ6UX01 489 aa12.7□□□□□ -0.38
PHGDH-222ENST00000641587 IREB2P48200 963 aaKnown RBP12.69□□□□□ -0.38
PHGDH-222ENST00000641587 SUPT20HL1Q3ZLR7 823 aa12.69□□□□□ -0.38
PHGDH-222ENST00000641587 BEND3Q5T5X7 828 aa12.69□□□□□ -0.38
PHGDH-222ENST00000641587 OPTNQ96CV9 577 aa12.69□□□□□ -0.38
PHGDH-222ENST00000641587 ERO1AQ96HE7 468 aa12.69□□□□□ -0.38
PHGDH-222ENST00000641587 TDRD3Q9H7E2 651 aaKnown RBP12.69□□□□□ -0.38
PHGDH-222ENST00000641587 VAMP4O75379 141 aa12.68□□□□□ -0.38
PHGDH-222ENST00000641587 GYG1P46976 350 aa12.68□□□□□ -0.38
PHGDH-222ENST00000641587 FKBP1AP62942 108 aaKnown RBP12.68□□□□□ -0.38
PHGDH-222ENST00000641587 GRIK5Q16478 980 aa12.68□□□□□ -0.38
PHGDH-222ENST00000641587 SPDYE2Q495Y8 402 aa12.68□□□□□ -0.38
PHGDH-222ENST00000641587 HABP4Q5JVS0 413 aaKnown RBP12.68□□□□□ -0.38
PHGDH-222ENST00000641587 LDHAL6AQ6ZMR3 332 aa12.68□□□□□ -0.38
PHGDH-222ENST00000641587 ANKRD13AQ8IZ07 590 aa12.68□□□□□ -0.38
PHGDH-222ENST00000641587 MS4A4AQ96JQ5 239 aa12.68□□□□□ -0.38
PHGDH-222ENST00000641587 EFCC1Q9HA90 598 aa12.68□□□□□ -0.38
PHGDH-222ENST00000641587 CNNM1Q9NRU3 951 aa12.68□□□□□ -0.38
PHGDH-222ENST00000641587 ZNF70Q9UC06 446 aaPredicted RBP12.68□□□□□ -0.38
PHGDH-222ENST00000641587 IL16Q14005 1332 aa12.67□□□□□ -0.38
PHGDH-222ENST00000641587 TESPA1A2RU30 521 aaPredicted RBP12.67□□□□□ -0.38
PHGDH-222ENST00000641587 TCP10L2B9ZVM9 353 aa12.67□□□□□ -0.38
PHGDH-222ENST00000641587 SP3Q02447 781 aa12.67□□□□□ -0.38
PHGDH-222ENST00000641587 EXOSC9Q06265 439 aaKnown RBP12.67□□□□□ -0.38
PHGDH-222ENST00000641587 TAF7LQ5H9L4 462 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms