RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 SPTY2D1Q68D10 685 aaPredicted RBP15.73■□□□□ 0.11
PHGDH-218ENST00000641491 PLEKHM2Q8IWE5 1019 aa15.73■□□□□ 0.11
PHGDH-218ENST00000641491 SPATA5Q8NB90 893 aa15.73■□□□□ 0.11
PHGDH-218ENST00000641491 WDR66Q8TBY9 1149 aa15.73■□□□□ 0.11
PHGDH-218ENST00000641491 TBC1D22AQ8WUA7 517 aa15.73■□□□□ 0.11
PHGDH-218ENST00000641491 RILPL2Q969X0 211 aa15.73■□□□□ 0.11
PHGDH-218ENST00000641491 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.73■□□□□ 0.111e-14■□□□□ 11
PHGDH-218ENST00000641491 CD209Q9NNX6 404 aa15.73■□□□□ 0.11
PHGDH-218ENST00000641491 NFKBIEO00221 500 aa15.72■□□□□ 0.11
PHGDH-218ENST00000641491 FBXO33Q7Z6M2 555 aa15.72■□□□□ 0.11
PHGDH-218ENST00000641491 SLC51AQ86UW1 340 aa15.72■□□□□ 0.11
PHGDH-218ENST00000641491 OTUD7AQ8TE49 926 aaPredicted RBP15.72■□□□□ 0.11
PHGDH-218ENST00000641491 ZNF512BQ96KM6 892 aaPredicted RBP15.72■□□□□ 0.11
PHGDH-218ENST00000641491 RNF181Q9P0P0 153 aa15.72■□□□□ 0.11
PHGDH-218ENST00000641491 LRP2BPQ9P2M1 347 aa15.72■□□□□ 0.11
PHGDH-218ENST00000641491 STAP2Q9UGK3 403 aa15.72■□□□□ 0.11
PHGDH-218ENST00000641491 GOLIM4O00461 696 aa15.71■□□□□ 0.11
PHGDH-218ENST00000641491 PDE4AP27815 886 aa15.71■□□□□ 0.11
PHGDH-218ENST00000641491 TNIP1Q15025 636 aa15.71■□□□□ 0.11
PHGDH-218ENST00000641491 ZSCAN25Q6NSZ9 544 aa15.71■□□□□ 0.11
PHGDH-218ENST00000641491 FSD1Q9BTV5 496 aa15.71■□□□□ 0.11
PHGDH-218ENST00000641491 OSBPL3Q9H4L5 887 aa15.71■□□□□ 0.11
PHGDH-218ENST00000641491 SNRKQ9NRH2 765 aa15.71■□□□□ 0.11
PHGDH-218ENST00000641491 PAG1Q9NWQ8 432 aa15.71■□□□□ 0.11
PHGDH-218ENST00000641491 ABCF2Q9UG63 623 aa15.71■□□□□ 0.11
PHGDH-218ENST00000641491 ZNRF3Q9ULT6 936 aa15.71■□□□□ 0.11
PHGDH-218ENST00000641491 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.71■□□□□ 0.11
PHGDH-218ENST00000641491 USP17L3A6NCW0 530 aa15.7■□□□□ 0.1
PHGDH-218ENST00000641491 USP17L4A6NCW7 530 aa15.7■□□□□ 0.1
PHGDH-218ENST00000641491 IL1R1P14778 569 aa15.7■□□□□ 0.1
PHGDH-218ENST00000641491 GTF2IP78347 998 aa15.7■□□□□ 0.1
PHGDH-218ENST00000641491 MAP3K12Q12852 859 aa15.7■□□□□ 0.1
PHGDH-218ENST00000641491 RASGRF1Q13972 1273 aa15.7■□□□□ 0.1
PHGDH-218ENST00000641491 TTC22Q5TAA0 569 aa15.7■□□□□ 0.1
PHGDH-218ENST00000641491 TTLL5Q6EMB2 1281 aa15.7■□□□□ 0.1
PHGDH-218ENST00000641491 USP17L1Q7RTZ2 530 aa15.7■□□□□ 0.1
PHGDH-218ENST00000641491 DZIP1Q86YF9 867 aaKnown RBP15.7■□□□□ 0.1
PHGDH-218ENST00000641491 SLF2Q8IX21 1173 aa15.7■□□□□ 0.1
PHGDH-218ENST00000641491 EVI5LQ96CN4 794 aa15.7■□□□□ 0.1
PHGDH-218ENST00000641491 HAUS7Q99871 368 aa15.7■□□□□ 0.1
PHGDH-218ENST00000641491 NOL10Q9BSC4 688 aaKnown RBP15.7■□□□□ 0.1
PHGDH-218ENST00000641491 RAI14Q9P0K7 980 aa15.7■□□□□ 0.1
PHGDH-218ENST00000641491 HIP1O00291 1037 aa15.69■□□□□ 0.1
PHGDH-218ENST00000641491 IDH1O75874 414 aaKnown RBP15.69■□□□□ 0.1
PHGDH-218ENST00000641491 MAP4K4O95819 1239 aaPredicted RBP15.69■□□□□ 0.1
PHGDH-218ENST00000641491 MCAMP43121 646 aa15.69■□□□□ 0.1
PHGDH-218ENST00000641491 C9orf131Q5VYM1 1079 aa15.69■□□□□ 0.1
PHGDH-218ENST00000641491 ERICH6Q7L0X2 663 aa15.69■□□□□ 0.1
PHGDH-218ENST00000641491 TXNRD3Q86VQ6 643 aa15.69■□□□□ 0.1
PHGDH-218ENST00000641491 TDRD7Q8NHU6 1098 aaKnown RBP15.69■□□□□ 0.1
PHGDH-218ENST00000641491 BRCA1P38398 1863 aaKnown RBP15.69■□□□□ 0.1
PHGDH-218ENST00000641491 PCNTO95613 3336 aa15.69■□□□□ 0.1
PHGDH-218ENST00000641491 MAST3O60307 1309 aa15.68■□□□□ 0.1
PHGDH-218ENST00000641491 PDS5AQ29RF7 1337 aaKnown RBP15.68■□□□□ 0.1
PHGDH-218ENST00000641491 MYO3BQ8WXR4 1341 aa15.68■□□□□ 0.1
PHGDH-218ENST00000641491 ARFGEF1Q9Y6D6 1849 aa15.68■□□□□ 0.1
PHGDH-218ENST00000641491 DUOX1Q9NRD9 1551 aa15.68■□□□□ 0.1
PHGDH-218ENST00000641491 WTIPA6NIX2 430 aaPredicted RBP15.68■□□□□ 0.1
PHGDH-218ENST00000641491 EIF5BO60841 1220 aaKnown RBP15.68■□□□□ 0.1
PHGDH-218ENST00000641491 LDHBP07195 334 aaKnown RBP15.68■□□□□ 0.1
PHGDH-218ENST00000641491 ZAP70P43403 619 aa15.68■□□□□ 0.1
PHGDH-218ENST00000641491 GSTO1P78417 241 aa15.68■□□□□ 0.1
PHGDH-218ENST00000641491 MFSD14BQ5SR56 506 aa15.68■□□□□ 0.1
PHGDH-218ENST00000641491 CIAPIN1Q6FI81 312 aa15.68■□□□□ 0.1
PHGDH-218ENST00000641491 DIAPH3Q9NSV4 1193 aa15.68■□□□□ 0.1
PHGDH-218ENST00000641491 HMG20BQ9P0W2 317 aa15.68■□□□□ 0.1
PHGDH-218ENST00000641491 HDAC9Q9UKV0 1011 aa15.68■□□□□ 0.1
PHGDH-218ENST00000641491 JAG2Q9Y219 1238 aa15.68■□□□□ 0.1
PHGDH-218ENST00000641491 ARAP2Q8WZ64 1704 aa15.68■□□□□ 0.1
PHGDH-218ENST00000641491 RAD17O75943 681 aa15.67■□□□□ 0.1
PHGDH-218ENST00000641491 BMP2KLQ5H9B9 411 aa15.67■□□□□ 0.1
PHGDH-218ENST00000641491 STRIP1Q5VSL9 837 aa15.67■□□□□ 0.1
PHGDH-218ENST00000641491 DPY19L2Q6NUT2 758 aa15.67■□□□□ 0.1
PHGDH-218ENST00000641491 OGFOD1Q8N543 542 aa15.67■□□□□ 0.1
PHGDH-218ENST00000641491 PI4K2BQ8TCG2 481 aa15.67■□□□□ 0.1
PHGDH-218ENST00000641491 GJA3Q9Y6H8 435 aa15.67■□□□□ 0.1
PHGDH-218ENST00000641491 SALL3Q9BXA9 1300 aa15.67■□□□□ 0.1
PHGDH-218ENST00000641491 RRAGCQ9HB90 399 aa15.66■□□□□ 0.1
PHGDH-218ENST00000641491 A0A1B0GUL6 1792 aa15.66■□□□□ 0.1
PHGDH-218ENST00000641491 SNED1Q8TER0 1413 aa15.66■□□□□ 0.1
PHGDH-218ENST00000641491 IGSF3O75054 1194 aa15.65■□□□□ 0.1
PHGDH-218ENST00000641491 ZFYP08048 801 aaPredicted RBP15.65■□□□□ 0.1
PHGDH-218ENST00000641491 LMOD1P29536 600 aaPredicted RBP15.65■□□□□ 0.1
PHGDH-218ENST00000641491 PI16Q6UXB8 463 aa15.65■□□□□ 0.1
PHGDH-218ENST00000641491 SKAP1Q86WV1 359 aa15.65■□□□□ 0.1
PHGDH-218ENST00000641491 SMC1BQ8NDV3 1235 aa15.65■□□□□ 0.1
PHGDH-218ENST00000641491 RUFY2Q8WXA3 655 aa15.65■□□□□ 0.1
PHGDH-218ENST00000641491 SUGT1Q9Y2Z0 365 aa15.65■□□□□ 0.1
PHGDH-218ENST00000641491 LTBP1Q14766 1721 aa15.65■□□□□ 0.1
PHGDH-218ENST00000641491 ZC3H4Q9UPT8 1303 aaKnown RBP15.65■□□□□ 0.1
PHGDH-218ENST00000641491 IRS2Q9Y4H2 1338 aa15.65■□□□□ 0.1
PHGDH-218ENST00000641491 F8W031 263 aaPredicted RBP15.64■□□□□ 0.09
PHGDH-218ENST00000641491 LDHCP07864 332 aa15.64■□□□□ 0.09
PHGDH-218ENST00000641491 RBM5P52756 815 aaKnown RBP eCLIP15.64■□□□□ 0.09
PHGDH-218ENST00000641491 SCARF1Q14162 830 aa15.64■□□□□ 0.09
PHGDH-218ENST00000641491 TMED8Q6PL24 325 aaPredicted RBP15.64■□□□□ 0.09
PHGDH-218ENST00000641491 KBTBD3Q8NAB2 608 aa15.64■□□□□ 0.09
PHGDH-218ENST00000641491 NDUFB9Q9Y6M9 179 aa15.64■□□□□ 0.09
PHGDH-218ENST00000641491 FAM205AQ6ZU69 1335 aa15.64■□□□□ 0.09
PHGDH-218ENST00000641491 SALL1Q9NSC2 1324 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms