RNA–Protein interactions for RNA: ENST00000640610.1

PAX6-273, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,730 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-273ENST00000640610 PSMA5P28066 241 aa11.16□□□□□ -0.62
PAX6-273ENST00000640610 TYRO3Q06418 890 aa11.16□□□□□ -0.62
PAX6-273ENST00000640610 ZSCAN25Q6NSZ9 544 aa11.16□□□□□ -0.62
PAX6-273ENST00000640610 HAUS7Q99871 368 aa11.16□□□□□ -0.62
PAX6-273ENST00000640610 LOC102724428A0A0B4J2F2 783 aa11.15□□□□□ -0.62
PAX6-273ENST00000640610 SIK1P57059 783 aa11.15□□□□□ -0.62
PAX6-273ENST00000640610 RNF20Q5VTR2 975 aa11.15□□□□□ -0.62
PAX6-273ENST00000640610 FAM196AQ6ZSG2 479 aa11.15□□□□□ -0.62
PAX6-273ENST00000640610 STOX1Q6ZVD7 989 aa11.15□□□□□ -0.62
PAX6-273ENST00000640610 PLA2G4DQ86XP0 818 aa11.15□□□□□ -0.62
PAX6-273ENST00000640610 CWC25Q9NXE8 425 aaPredicted RBP11.15□□□□□ -0.62
PAX6-273ENST00000640610 MRVI1Q9Y6F6 885 aa11.15□□□□□ -0.62
PAX6-273ENST00000640610 PPFIA3O75145 1194 aa11.15□□□□□ -0.62
PAX6-273ENST00000640610 ZNF75DP51815 510 aa11.15□□□□□ -0.62
PAX6-273ENST00000640610 TPD52L1Q16890 204 aaPredicted RBP11.15□□□□□ -0.62
PAX6-273ENST00000640610 SMARCC1Q92922 1105 aaPredicted RBP11.15□□□□□ -0.62
PAX6-273ENST00000640610 TIGD1Q96MW7 591 aa11.15□□□□□ -0.62
PAX6-273ENST00000640610 ELP1O95163 1332 aa11.15□□□□□ -0.62
PAX6-273ENST00000640610 ATP6V1AP38606 617 aa11.15□□□□□ -0.63
PAX6-273ENST00000640610 SLC20A2Q08357 652 aa11.15□□□□□ -0.63
PAX6-273ENST00000640610 USPL1Q5W0Q7 1092 aa11.15□□□□□ -0.63
PAX6-273ENST00000640610 TTC6Q86TZ1 520 aa11.15□□□□□ -0.63
PAX6-273ENST00000640610 TEX13AQ9BXU3 409 aaPredicted RBP11.15□□□□□ -0.63
PAX6-273ENST00000640610 CALCOCO1Q9P1Z2 691 aa11.15□□□□□ -0.63
PAX6-273ENST00000640610 MYH14Q7Z406 1995 aaKnown RBP11.14□□□□□ -0.63
PAX6-273ENST00000640610 LY75O60449 1722 aa11.14□□□□□ -0.63
PAX6-273ENST00000640610 CYP19A1P11511 503 aaPredicted RBP11.14□□□□□ -0.63
PAX6-273ENST00000640610 FOSBP53539 338 aa11.14□□□□□ -0.63
PAX6-273ENST00000640610 KRT85P78386 507 aa11.14□□□□□ -0.63
PAX6-273ENST00000640610 CEP135Q66GS9 1140 aa11.14□□□□□ -0.63
PAX6-273ENST00000640610 Q6ZUG5 572 aa11.14□□□□□ -0.63
PAX6-273ENST00000640610 TDRD7Q8NHU6 1098 aaKnown RBP11.14□□□□□ -0.63
PAX6-273ENST00000640610 DDX11Q96FC9 970 aa11.14□□□□□ -0.63
PAX6-273ENST00000640610 TRIM5Q9C035 493 aa11.14□□□□□ -0.63
PAX6-273ENST00000640610 BCL11BQ9C0K0 894 aaPredicted RBP11.14□□□□□ -0.63
PAX6-273ENST00000640610 TFIP11Q9UBB9 837 aaKnown RBP11.14□□□□□ -0.63
PAX6-273ENST00000640610 COL5A3P25940 1745 aaPredicted RBP11.14□□□□□ -0.63
PAX6-273ENST00000640610 CICQ96RK0 1608 aaPredicted RBP11.14□□□□□ -0.63
PAX6-273ENST00000640610 ZNF831Q5JPB2 1677 aa11.14□□□□□ -0.63
PAX6-273ENST00000640610 NEMFO60524 1076 aa11.14□□□□□ -0.63
PAX6-273ENST00000640610 TRIM37O94972 964 aa11.14□□□□□ -0.63
PAX6-273ENST00000640610 STARD3NLO95772 234 aa11.14□□□□□ -0.63
PAX6-273ENST00000640610 CDC25BP30305 580 aa11.14□□□□□ -0.63
PAX6-273ENST00000640610 KCNQ4P56696 695 aa11.14□□□□□ -0.63
PAX6-273ENST00000640610 LRMPQ12912 555 aa11.14□□□□□ -0.63
PAX6-273ENST00000640610 ITPK1Q13572 414 aa11.14□□□□□ -0.63
PAX6-273ENST00000640610 MCMDC2Q4G0Z9 681 aa11.14□□□□□ -0.63
PAX6-273ENST00000640610 LUZP1Q86V48 1076 aa11.14□□□□□ -0.63
PAX6-273ENST00000640610 SYNE4Q8N205 404 aa11.14□□□□□ -0.63
PAX6-273ENST00000640610 NEK1Q96PY6 1258 aa11.14□□□□□ -0.63
PAX6-273ENST00000640610 FAM53CQ9NYF3 392 aa11.14□□□□□ -0.63
PAX6-273ENST00000640610 CAVIN2O95810 425 aa11.13□□□□□ -0.63
PAX6-273ENST00000640610 KBTBD3Q8NAB2 608 aa11.13□□□□□ -0.63
PAX6-273ENST00000640610 CBX8Q9HC52 389 aa11.13□□□□□ -0.63
PAX6-273ENST00000640610 DDX19AQ9NUU7 478 aaKnown RBP11.13□□□□□ -0.63
PAX6-273ENST00000640610 PAG1Q9NWQ8 432 aa11.13□□□□□ -0.63
PAX6-273ENST00000640610 TSGA10IPQ3SY00 556 aa11.13□□□□□ -0.63
PAX6-273ENST00000640610 TNMDQ9H2S6 317 aa11.13□□□□□ -0.63
PAX6-273ENST00000640610 HMG20BQ9P0W2 317 aa11.13□□□□□ -0.63
PAX6-273ENST00000640610 NAP1L2Q9ULW6 460 aaPredicted RBP11.13□□□□□ -0.63
PAX6-273ENST00000640610 NUP188Q5SRE5 1749 aa11.12□□□□□ -0.63
PAX6-273ENST00000640610 HSP90B1P14625 803 aaKnown RBP11.12□□□□□ -0.63
PAX6-273ENST00000640610 LIG1P18858 919 aa11.12□□□□□ -0.63
PAX6-273ENST00000640610 ADORA1P30542 326 aa11.12□□□□□ -0.63
PAX6-273ENST00000640610 IRX5P78411 483 aaPredicted RBP11.12□□□□□ -0.63
PAX6-273ENST00000640610 ANO6Q4KMQ2 910 aa11.12□□□□□ -0.63
PAX6-273ENST00000640610 HSP90AB3PQ58FF7 597 aa11.12□□□□□ -0.63
PAX6-273ENST00000640610 CHST3Q7LGC8 479 aa11.12□□□□□ -0.63
PAX6-273ENST00000640610 IPO4Q8TEX9 1081 aaKnown RBP11.12□□□□□ -0.63
PAX6-273ENST00000640610 BRF1Q92994 677 aa11.12□□□□□ -0.63
PAX6-273ENST00000640610 ERO1AQ96HE7 468 aa11.12□□□□□ -0.63
PAX6-273ENST00000640610 TAF1LQ8IZX4 1826 aa11.12□□□□□ -0.63
PAX6-273ENST00000640610 A0A1B0GUL7 405 aa11.12□□□□□ -0.63
PAX6-273ENST00000640610 CAMK4Q16566 473 aa11.12□□□□□ -0.63
PAX6-273ENST00000640610 KMT5BQ4FZB7 885 aa11.12□□□□□ -0.63
PAX6-273ENST00000640610 RBM43Q6ZSC3 357 aaKnown RBP11.12□□□□□ -0.63
PAX6-273ENST00000640610 FAM89AQ96GI7 184 aa11.12□□□□□ -0.63
PAX6-273ENST00000640610 CLIP2Q9UDT6 1046 aa11.12□□□□□ -0.63
PAX6-273ENST00000640610 EYA2O00167 538 aa11.11□□□□□ -0.63
PAX6-273ENST00000640610 NAA30Q147X3 362 aaPredicted RBP11.11□□□□□ -0.63
PAX6-273ENST00000640610 ANKRD1Q15327 319 aa11.11□□□□□ -0.63
PAX6-273ENST00000640610 GTF3C6Q969F1 213 aa11.11□□□□□ -0.63
PAX6-273ENST00000640610 NRBP1Q9UHY1 535 aa11.11□□□□□ -0.63
PAX6-273ENST00000640610 M0R2C6 588 aa11.11□□□□□ -0.63
PAX6-273ENST00000640610 SCRN1Q12765 414 aa11.11□□□□□ -0.63
PAX6-273ENST00000640610 TTLL5Q6EMB2 1281 aa11.11□□□□□ -0.63
PAX6-273ENST00000640610 CCDC191Q8NCU4 936 aa11.11□□□□□ -0.63
PAX6-273ENST00000640610 CACTINQ8WUQ7 758 aaKnown RBP11.11□□□□□ -0.63
PAX6-273ENST00000640610 ZBTB1Q9Y2K1 713 aa11.11□□□□□ -0.63
PAX6-273ENST00000640610 U3KPZ7 1027 aaPredicted RBP11.11□□□□□ -0.63
PAX6-273ENST00000640610 RREB1Q92766 1687 aa11.1□□□□□ -0.63
PAX6-273ENST00000640610 KIF2AO00139 706 aaPredicted RBP11.1□□□□□ -0.63
PAX6-273ENST00000640610 IFIT1P09914 478 aaKnown RBP11.1□□□□□ -0.63
PAX6-273ENST00000640610 PDCP20941 246 aa11.1□□□□□ -0.63
PAX6-273ENST00000640610 FKBP4Q02790 459 aaKnown RBP eCLIP11.1□□□□□ -0.63
PAX6-273ENST00000640610 PTPN14Q15678 1187 aa11.1□□□□□ -0.63
PAX6-273ENST00000640610 INTS5Q6P9B9 1019 aaKnown RBP11.1□□□□□ -0.63
PAX6-273ENST00000640610 PI16Q6UXB8 463 aa11.1□□□□□ -0.63
PAX6-273ENST00000640610 SCAND2PQ9GZW5 306 aaPredicted RBP11.1□□□□□ -0.63
PAX6-273ENST00000640610 TSPYL1Q9H0U9 437 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms