RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 MYL10Q9BUA6 226 aa16.52■□□□□ 0.23
SCARB2-216ENST00000639300 MCM9Q9NXL9 1143 aa16.52■□□□□ 0.23
SCARB2-216ENST00000639300 ZAP70P43403 619 aa16.52■□□□□ 0.23
SCARB2-216ENST00000639300 NSFL1CQ9UNZ2 370 aaKnown RBP16.52■□□□□ 0.23
SCARB2-216ENST00000639300 PAXBP1Q9Y5B6 917 aa16.52■□□□□ 0.23
SCARB2-216ENST00000639300 PRDM1O75626 825 aa16.51■□□□□ 0.23
SCARB2-216ENST00000639300 HEATR3Q7Z4Q2 680 aa16.51■□□□□ 0.23
SCARB2-216ENST00000639300 ANTXR1Q9H6X2 564 aa16.51■□□□□ 0.23
SCARB2-216ENST00000639300 CGNQ9P2M7 1197 aaKnown RBP16.51■□□□□ 0.23
SCARB2-216ENST00000639300 ATP5JP18859 108 aa16.51■□□□□ 0.23
SCARB2-216ENST00000639300 TXLNBQ8N3L3 684 aa16.51■□□□□ 0.23
SCARB2-216ENST00000639300 CALML4Q96GE6 196 aa16.51■□□□□ 0.23
SCARB2-216ENST00000639300 RNF216Q9NWF9 866 aaPredicted RBP16.51■□□□□ 0.23
SCARB2-216ENST00000639300 SH3TC1Q8TE82 1336 aa16.51■□□□□ 0.23
SCARB2-216ENST00000639300 FAM135BQ49AJ0 1406 aa16.51■□□□□ 0.23
SCARB2-216ENST00000639300 FAM160A1Q05DH4 1040 aa16.51■□□□□ 0.23
SCARB2-216ENST00000639300 BRAPQ7Z569 592 aa16.51■□□□□ 0.23
SCARB2-216ENST00000639300 TAF4BQ92750 862 aa16.51■□□□□ 0.23
SCARB2-216ENST00000639300 CRACR2AQ9BSW2 395 aa16.51■□□□□ 0.23
SCARB2-216ENST00000639300 TAF3Q5VWG9 929 aa16.5■□□□□ 0.23
SCARB2-216ENST00000639300 SLF2Q8IX21 1173 aa16.5■□□□□ 0.23
SCARB2-216ENST00000639300 ARMT1Q9H993 441 aa16.5■□□□□ 0.23
SCARB2-216ENST00000639300 TM6SF1Q9BZW5 370 aa16.5■□□□□ 0.23
SCARB2-216ENST00000639300 ERCC6L2Q5T890 1561 aa16.5■□□□□ 0.23
SCARB2-216ENST00000639300 ADCK5Q3MIX3 580 aa16.5■□□□□ 0.23
SCARB2-216ENST00000639300 IGSF1Q8N6C5 1336 aa16.5■□□□□ 0.23
SCARB2-216ENST00000639300 TSG101Q99816 390 aa16.5■□□□□ 0.23
SCARB2-216ENST00000639300 MYO6Q9UM54 1294 aa16.5■□□□□ 0.23
SCARB2-216ENST00000639300 TCERG1LQ5VWI1 586 aa16.49■□□□□ 0.23
SCARB2-216ENST00000639300 C8orf37Q96NL8 207 aa16.49■□□□□ 0.23
SCARB2-216ENST00000639300 GOLGA6L10A6NI86 522 aa16.49■□□□□ 0.23
SCARB2-216ENST00000639300 PHKBQ93100 1093 aa16.49■□□□□ 0.23
SCARB2-216ENST00000639300 ZBTB9Q96C00 473 aa16.49■□□□□ 0.23
SCARB2-216ENST00000639300 CABP5Q9NP86 173 aa16.49■□□□□ 0.23
SCARB2-216ENST00000639300 TPCN1Q9ULQ1 816 aa16.49■□□□□ 0.23
SCARB2-216ENST00000639300 ANGEL1Q9UNK9 670 aaKnown RBP16.49■□□□□ 0.23
SCARB2-216ENST00000639300 PHKG2P15735 406 aa16.49■□□□□ 0.23
SCARB2-216ENST00000639300 STAT6P42226 847 aa16.49■□□□□ 0.23
SCARB2-216ENST00000639300 PREX2Q70Z35 1606 aa16.49■□□□□ 0.23
SCARB2-216ENST00000639300 CCDC178Q5BJE1 867 aa16.48■□□□□ 0.23
SCARB2-216ENST00000639300 IQCEQ6IPM2 695 aa16.48■□□□□ 0.23
SCARB2-216ENST00000639300 CCDC24Q8N4L8 307 aa16.48■□□□□ 0.23
SCARB2-216ENST00000639300 TPTE2Q6XPS3 522 aa16.48■□□□□ 0.23
SCARB2-216ENST00000639300 SMARCC1Q92922 1105 aaPredicted RBP16.48■□□□□ 0.23
SCARB2-216ENST00000639300 PKNOX2Q96KN3 472 aa16.48■□□□□ 0.23
SCARB2-216ENST00000639300 CCDC40Q4G0X9 1142 aa16.48■□□□□ 0.23
SCARB2-216ENST00000639300 SPECC1Q5M775 1068 aa16.48■□□□□ 0.23
SCARB2-216ENST00000639300 GPT2Q8TD30 523 aa16.48■□□□□ 0.23
SCARB2-216ENST00000639300 MLH3Q9UHC1 1453 aa16.48■□□□□ 0.23
SCARB2-216ENST00000639300 GNAT2P19087 354 aa16.48■□□□□ 0.23
SCARB2-216ENST00000639300 TRIM21P19474 475 aaKnown RBP16.48■□□□□ 0.23
SCARB2-216ENST00000639300 AMPD3Q01432 767 aa16.48■□□□□ 0.23
SCARB2-216ENST00000639300 PLIN2Q99541 437 aa16.48■□□□□ 0.23
SCARB2-216ENST00000639300 CBX8Q9HC52 389 aa16.48■□□□□ 0.23
SCARB2-216ENST00000639300 STAP2Q9UGK3 403 aa16.48■□□□□ 0.23
SCARB2-216ENST00000639300 PICALMQ13492 652 aa16.47■□□□□ 0.23
SCARB2-216ENST00000639300 TLR7Q9NYK1 1049 aaKnown RBP16.47■□□□□ 0.23
SCARB2-216ENST00000639300 BMP15O95972 392 aa16.47■□□□□ 0.23
SCARB2-216ENST00000639300 ANO1Q5XXA6 986 aa16.47■□□□□ 0.23
SCARB2-216ENST00000639300 OSBPL3Q9H4L5 887 aa16.47■□□□□ 0.23
SCARB2-216ENST00000639300 LIG1P18858 919 aa16.47■□□□□ 0.23
SCARB2-216ENST00000639300 ZNF622Q969S3 477 aaKnown RBP eCLIP16.47■□□□□ 0.23
SCARB2-216ENST00000639300 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.47■□□□□ 0.23
SCARB2-216ENST00000639300 GBP3Q9H0R5 595 aa16.47■□□□□ 0.23
SCARB2-216ENST00000639300 MTMR6Q9Y217 621 aa16.47■□□□□ 0.23
SCARB2-216ENST00000639300 E7EWF7 191 aa16.46■□□□□ 0.23
SCARB2-216ENST00000639300 USO1O60763 962 aaKnown RBP16.46■□□□□ 0.23
SCARB2-216ENST00000639300 ERLIN2O94905 339 aa16.46■□□□□ 0.23
SCARB2-216ENST00000639300 MCM7P33993 719 aa16.46■□□□□ 0.23
SCARB2-216ENST00000639300 LLPHQ9BRT6 129 aaKnown RBP16.46■□□□□ 0.23
SCARB2-216ENST00000639300 PPP1R12BO60237 982 aaPredicted RBP16.46■□□□□ 0.23
SCARB2-216ENST00000639300 SF3B2Q13435 895 aaKnown RBP16.46■□□□□ 0.23
SCARB2-216ENST00000639300 LRRC24Q50LG9 513 aa16.46■□□□□ 0.23
SCARB2-216ENST00000639300 KRI1Q8N9T8 703 aaKnown RBP16.46■□□□□ 0.23
SCARB2-216ENST00000639300 AKR1B10O60218 316 aa16.46■□□□□ 0.23
SCARB2-216ENST00000639300 FGFR1OPO95684 399 aaKnown RBP16.46■□□□□ 0.23
SCARB2-216ENST00000639300 CLSTN2Q9H4D0 955 aa16.46■□□□□ 0.23
SCARB2-216ENST00000639300 GOLGA6L9A6NEM1 432 aa16.46■□□□□ 0.22
SCARB2-216ENST00000639300 MATR3P43243 847 aaKnown RBP eCLIP16.46■□□□□ 0.22
SCARB2-216ENST00000639300 NAPAP54920 295 aa16.46■□□□□ 0.22
SCARB2-216ENST00000639300 PDE8AO60658 829 aa16.45■□□□□ 0.22
SCARB2-216ENST00000639300 PAFAH1B1P43034 410 aa16.45■□□□□ 0.22
SCARB2-216ENST00000639300 PUM3Q15397 648 aaKnown RBP16.45■□□□□ 0.22
SCARB2-216ENST00000639300 ZNF174Q15697 407 aa16.45■□□□□ 0.22
SCARB2-216ENST00000639300 ZSWIM6Q9HCJ5 1215 aa16.45■□□□□ 0.22
SCARB2-216ENST00000639300 MYO1BO43795 1136 aa16.45■□□□□ 0.22
SCARB2-216ENST00000639300 GNAQP50148 359 aa16.45■□□□□ 0.22
SCARB2-216ENST00000639300 TCIRG1Q13488 830 aa16.45■□□□□ 0.22
SCARB2-216ENST00000639300 ARHGEF25Q86VW2 580 aa16.45■□□□□ 0.22
SCARB2-216ENST00000639300 DIS3L2Q8IYB7 885 aaKnown RBP16.45■□□□□ 0.22
SCARB2-216ENST00000639300 TRERF1Q96PN7 1200 aa16.45■□□□□ 0.22
SCARB2-216ENST00000639300 CDC42BPAQ5VT25 1732 aa16.45■□□□□ 0.22
SCARB2-216ENST00000639300 EXOC1Q9NV70 894 aa16.45■□□□□ 0.22
SCARB2-216ENST00000639300 ZFYVE16Q7Z3T8 1539 aa16.45■□□□□ 0.22
SCARB2-216ENST00000639300 hCG_1642624A0A1W2PR95 340 aa16.44■□□□□ 0.22
SCARB2-216ENST00000639300 VWA3AA6NCI4 1184 aa16.44■□□□□ 0.22
SCARB2-216ENST00000639300 ASIC1P78348 528 aa16.44■□□□□ 0.22
SCARB2-216ENST00000639300 ATL3Q6DD88 541 aa16.44■□□□□ 0.22
SCARB2-216ENST00000639300 SYT10Q6XYQ8 523 aa16.44■□□□□ 0.22
SCARB2-216ENST00000639300 PYM1Q9BRP8 204 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms