RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 TTF2Q9UNY4 1162 aaKnown RBP10.15□□□□□ -0.78
FAM49B-230ENST00000639004 WIPF1O43516 503 aa10.14□□□□□ -0.79
FAM49B-230ENST00000639004 EPHA1P21709 976 aa10.14□□□□□ -0.79
FAM49B-230ENST00000639004 BAG6P46379 1132 aa10.14□□□□□ -0.79
FAM49B-230ENST00000639004 CACTIN-AS1Q8N1I8 211 aa10.14□□□□□ -0.79
FAM49B-230ENST00000639004 SVOPQ8N4V2 548 aa10.14□□□□□ -0.79
FAM49B-230ENST00000639004 METTL5Q9NRN9 209 aaKnown RBP10.14□□□□□ -0.79
FAM49B-230ENST00000639004 HOXB4P17483 251 aaPredicted RBP10.13□□□□□ -0.79
FAM49B-230ENST00000639004 HDLBPQ00341 1268 aaKnown RBP10.13□□□□□ -0.79
FAM49B-230ENST00000639004 FAAP100Q0VG06 881 aa10.13□□□□□ -0.79
FAM49B-230ENST00000639004 COL9A3Q14050 684 aaPredicted RBP10.13□□□□□ -0.79
FAM49B-230ENST00000639004 RPS26P11Q5JNZ5 115 aaPredicted RBP10.13□□□□□ -0.79
FAM49B-230ENST00000639004 IL22RA1Q8N6P7 574 aa10.13□□□□□ -0.79
FAM49B-230ENST00000639004 CLEC4MQ9H2X3 399 aaPredicted RBP10.13□□□□□ -0.79
FAM49B-230ENST00000639004 FBXO24O75426 580 aa10.12□□□□□ -0.79
FAM49B-230ENST00000639004 ARHGEF15O94989 841 aa10.12□□□□□ -0.79
FAM49B-230ENST00000639004 ZNF76P36508 570 aa10.12□□□□□ -0.79
FAM49B-230ENST00000639004 DGKGP49619 791 aa10.12□□□□□ -0.79
FAM49B-230ENST00000639004 NID1P14543 1247 aa10.11□□□□□ -0.79
FAM49B-230ENST00000639004 PCDH1Q08174 1060 aa10.11□□□□□ -0.79
FAM49B-230ENST00000639004 TPTE2Q6XPS3 522 aa10.11□□□□□ -0.79
FAM49B-230ENST00000639004 METTL16Q86W50 562 aaKnown RBP10.11□□□□□ -0.79
FAM49B-230ENST00000639004 NEDD1Q8NHV4 660 aa10.11□□□□□ -0.79
FAM49B-230ENST00000639004 SEC31BQ9NQW1 1179 aa10.11□□□□□ -0.79
FAM49B-230ENST00000639004 FAM177BA6PVY3 158 aa10.1□□□□□ -0.79
FAM49B-230ENST00000639004 ESRRAP11474 423 aaPredicted RBP10.1□□□□□ -0.79
FAM49B-230ENST00000639004 CABP4P57796 275 aa10.1□□□□□ -0.79
FAM49B-230ENST00000639004 ZNF423Q2M1K9 1284 aa10.1□□□□□ -0.79
FAM49B-230ENST00000639004 MSL1Q68DK7 614 aa10.1□□□□□ -0.79
FAM49B-230ENST00000639004 RNF34Q969K3 372 aa10.1□□□□□ -0.79
FAM49B-230ENST00000639004 ENAMQ9NRM1 1142 aa10.1□□□□□ -0.79
FAM49B-230ENST00000639004 PPME1Q9Y570 386 aa10.1□□□□□ -0.79
FAM49B-230ENST00000639004 H3BRJ5 948 aa10.09□□□□□ -0.79
FAM49B-230ENST00000639004 B3GALT4O96024 378 aa10.09□□□□□ -0.79
FAM49B-230ENST00000639004 LORP23490 312 aaPredicted RBP10.09□□□□□ -0.79
FAM49B-230ENST00000639004 CDC25BP30305 580 aa10.09□□□□□ -0.79
FAM49B-230ENST00000639004 C9orf131Q5VYM1 1079 aa10.09□□□□□ -0.79
FAM49B-230ENST00000639004 ILDR2Q71H61 639 aa10.09□□□□□ -0.79
FAM49B-230ENST00000639004 WFDC8Q8IUA0 241 aa10.09□□□□□ -0.79
FAM49B-230ENST00000639004 NECAB3Q96P71 396 aaPredicted RBP10.09□□□□□ -0.79
FAM49B-230ENST00000639004 ZNF157P51786 506 aaPredicted RBP10.08□□□□□ -0.8
FAM49B-230ENST00000639004 IKBKEQ14164 716 aa10.08□□□□□ -0.8
FAM49B-230ENST00000639004 CCDC85BQ15834 202 aaPredicted RBP10.08□□□□□ -0.8
FAM49B-230ENST00000639004 SV2BQ7L1I2 683 aa10.08□□□□□ -0.8
FAM49B-230ENST00000639004 NOC4LQ9BVI4 516 aaKnown RBP10.08□□□□□ -0.8
FAM49B-230ENST00000639004 CEP44Q9C0F1 390 aa10.08□□□□□ -0.8
FAM49B-230ENST00000639004 RRAGCQ9HB90 399 aa10.08□□□□□ -0.8
FAM49B-230ENST00000639004 GPN3Q9UHW5 284 aaPredicted RBP10.08□□□□□ -0.8
FAM49B-230ENST00000639004 LINC01387J3KSC0 135 aa10.07□□□□□ -0.8
FAM49B-230ENST00000639004 SOX1O00570 391 aaPredicted RBP10.07□□□□□ -0.8
FAM49B-230ENST00000639004 ENC1O14682 589 aa10.07□□□□□ -0.8
FAM49B-230ENST00000639004 CELA3AP09093 270 aa10.07□□□□□ -0.8
FAM49B-230ENST00000639004 HGSNATQ68CP4 663 aa10.07□□□□□ -0.8
FAM49B-230ENST00000639004 TXNDC11Q6PKC3 985 aa10.07□□□□□ -0.8
FAM49B-230ENST00000639004 TRIM56Q9BRZ2 755 aaKnown RBP10.07□□□□□ -0.8
FAM49B-230ENST00000639004 SNRPNP63162 240 aaKnown RBP10.06□□□□□ -0.8
FAM49B-230ENST00000639004 HS2ST1Q7LGA3 356 aa10.06□□□□□ -0.8
FAM49B-230ENST00000639004 NT5DC4Q86YG4 428 aa10.06□□□□□ -0.8
FAM49B-230ENST00000639004 DMRTC2Q8IXT2 367 aaPredicted RBP10.06□□□□□ -0.8
FAM49B-230ENST00000639004 TMEM39AQ9NV64 488 aa10.06□□□□□ -0.8
FAM49B-230ENST00000639004 PIP4K2BP78356 416 aa10.05□□□□□ -0.8
FAM49B-230ENST00000639004 ERMP1Q7Z2K6 904 aa10.05□□□□□ -0.8
FAM49B-230ENST00000639004 GGT7Q9UJ14 662 aa10.05□□□□□ -0.8
FAM49B-230ENST00000639004 PAGE1O75459 146 aa10.04□□□□□ -0.8
FAM49B-230ENST00000639004 RAD51AP2Q09MP3 1159 aa10.04□□□□□ -0.8
FAM49B-230ENST00000639004 FAM117BQ6P1L5 589 aa10.04□□□□□ -0.8
FAM49B-230ENST00000639004 LINC00114Q6XXX2 140 aa10.04□□□□□ -0.8
FAM49B-230ENST00000639004 SLC7A3Q8WY07 619 aa10.04□□□□□ -0.8
FAM49B-230ENST00000639004 WNT8BQ93098 351 aa10.04□□□□□ -0.8
FAM49B-230ENST00000639004 TRIM11Q96F44 468 aa10.04□□□□□ -0.8
FAM49B-230ENST00000639004 SOX17Q9H6I2 414 aaPredicted RBP10.04□□□□□ -0.8
FAM49B-230ENST00000639004 FSCN2O14926 492 aa10.03□□□□□ -0.8
FAM49B-230ENST00000639004 ERCC5P28715 1186 aaPredicted RBP10.03□□□□□ -0.8
FAM49B-230ENST00000639004 PPP2R3AQ06190 1150 aa10.03□□□□□ -0.8
FAM49B-230ENST00000639004 SETDB1Q15047 1291 aa10.03□□□□□ -0.8
FAM49B-230ENST00000639004 ZSCAN1Q8NBB4 408 aa10.03□□□□□ -0.8
FAM49B-230ENST00000639004 RSRP1Q9BUV0 290 aa10.03□□□□□ -0.8
FAM49B-230ENST00000639004 CARD10Q9BWT7 1032 aa10.03□□□□□ -0.8
FAM49B-230ENST00000639004 COPRSQ9NQ92 184 aa10.03□□□□□ -0.8
FAM49B-230ENST00000639004 TM4SF5O14894 197 aa10.02□□□□□ -0.81
FAM49B-230ENST00000639004 C19orf57Q0VDD7 668 aa10.02□□□□□ -0.81
FAM49B-230ENST00000639004 MAP3K11Q16584 847 aa10.02□□□□□ -0.81
FAM49B-230ENST00000639004 OSGEPQ9NPF4 335 aa10.02□□□□□ -0.81
FAM49B-230ENST00000639004 LIG3P49916 1009 aa10.01□□□□□ -0.81
FAM49B-230ENST00000639004 ZNF394Q53GI3 561 aa10.01□□□□□ -0.81
FAM49B-230ENST00000639004 TRAPPC3LQ5T215 181 aa10.01□□□□□ -0.81
FAM49B-230ENST00000639004 USP48Q86UV5 1035 aa10.01□□□□□ -0.81
FAM49B-230ENST00000639004 KBTBD4Q9NVX7 518 aa10.01□□□□□ -0.81
FAM49B-230ENST00000639004 PCDHGB7Q9Y5F8 929 aa10.01□□□□□ -0.81
FAM49B-230ENST00000639004 F6X3S4 739 aa10□□□□□ -0.81
FAM49B-230ENST00000639004 DEAF1O75398 565 aaPredicted RBP10□□□□□ -0.81
FAM49B-230ENST00000639004 RLBP1P12271 317 aa10□□□□□ -0.81
FAM49B-230ENST00000639004 ARL4DP49703 201 aa10□□□□□ -0.81
FAM49B-230ENST00000639004 GSTM4Q03013 218 aa10□□□□□ -0.81
FAM49B-230ENST00000639004 PCNX4Q63HM2 1172 aa10□□□□□ -0.81
FAM49B-230ENST00000639004 TTBK2Q6IQ55 1244 aa10□□□□□ -0.81
FAM49B-230ENST00000639004 DTWD1Q8N5C7 304 aa10□□□□□ -0.81
FAM49B-230ENST00000639004 GALNT11Q8NCW6 608 aa10□□□□□ -0.81
FAM49B-230ENST00000639004 DDX54Q8TDD1 881 aaKnown RBP10□□□□□ -0.81
FAM49B-230ENST00000639004 STK35Q8TDR2 534 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms