RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 CPLX4Q7Z7G2 160 aa20.93■□□□□ 0.94
SCARB2-213ENST00000638680 LUC7L2Q9Y383 392 aaKnown RBP20.93■□□□□ 0.94
SCARB2-213ENST00000638680 MRVI1Q9Y6F6 885 aa20.93■□□□□ 0.94
SCARB2-213ENST00000638680 VAV2P52735 878 aa20.92■□□□□ 0.94
SCARB2-213ENST00000638680 GSTO1P78417 241 aa20.92■□□□□ 0.94
SCARB2-213ENST00000638680 TSNARE1Q96NA8 513 aa20.92■□□□□ 0.94
SCARB2-213ENST00000638680 SOS1Q07889 1333 aaPredicted RBP20.92■□□□□ 0.94
SCARB2-213ENST00000638680 TFCP2Q12800 502 aa20.92■□□□□ 0.94
SCARB2-213ENST00000638680 SF3B2Q13435 895 aaKnown RBP20.92■□□□□ 0.94
SCARB2-213ENST00000638680 CNGA4Q8IV77 575 aa20.92■□□□□ 0.94
SCARB2-213ENST00000638680 CCDC114Q96M63 670 aa20.92■□□□□ 0.94
SCARB2-213ENST00000638680 PPP1R9BQ96SB3 815 aa20.92■□□□□ 0.94
SCARB2-213ENST00000638680 CABP5Q9NP86 173 aa20.91■□□□□ 0.94
SCARB2-213ENST00000638680 ELP1O95163 1332 aa20.91■□□□□ 0.94
SCARB2-213ENST00000638680 ZBTB7BO15156 539 aaPredicted RBP20.91■□□□□ 0.94
SCARB2-213ENST00000638680 CWF19L2Q2TBE0 894 aaKnown RBP20.91■□□□□ 0.94
SCARB2-213ENST00000638680 GRIPAP1Q4V328 841 aa20.91■□□□□ 0.94
SCARB2-213ENST00000638680 RASSF4Q9H2L5 321 aa20.91■□□□□ 0.94
SCARB2-213ENST00000638680 POLKQ9UBT6 870 aa20.91■□□□□ 0.94
SCARB2-213ENST00000638680 RTL9Q8NET4 1388 aa20.91■□□□□ 0.94
SCARB2-213ENST00000638680 GNAQP50148 359 aa20.91■□□□□ 0.94
SCARB2-213ENST00000638680 SPATA24Q86W54 205 aa20.91■□□□□ 0.94
SCARB2-213ENST00000638680 RAD50Q92878 1312 aa20.91■□□□□ 0.94
SCARB2-213ENST00000638680 THOC2Q8NI27 1593 aaKnown RBP20.91■□□□□ 0.94
SCARB2-213ENST00000638680 PPIP5K1Q6PFW1 1433 aa20.91■□□□□ 0.94
SCARB2-213ENST00000638680 EXOC5O00471 708 aa20.91■□□□□ 0.94
SCARB2-213ENST00000638680 CCDC122Q5T0U0 273 aa20.91■□□□□ 0.94
SCARB2-213ENST00000638680 ZNF219Q9P2Y4 722 aaPredicted RBP20.91■□□□□ 0.94
SCARB2-213ENST00000638680 NUP160Q12769 1436 aa20.9■□□□□ 0.94
SCARB2-213ENST00000638680 FERP16591 822 aa20.9■□□□□ 0.94
SCARB2-213ENST00000638680 TTC14Q96N46 770 aa20.9■□□□□ 0.94
SCARB2-213ENST00000638680 PIK3C2GO75747 1445 aa20.9■□□□□ 0.94
SCARB2-213ENST00000638680 GSTA5Q7RTV2 222 aa20.9■□□□□ 0.94
SCARB2-213ENST00000638680 OTUD7AQ8TE49 926 aaPredicted RBP20.9■□□□□ 0.94
SCARB2-213ENST00000638680 TUBBP07437 444 aa20.9■□□□□ 0.94
SCARB2-213ENST00000638680 GJC1P36383 396 aa20.9■□□□□ 0.94
SCARB2-213ENST00000638680 KDM2BQ8NHM5 1336 aa20.9■□□□□ 0.94
SCARB2-213ENST00000638680 CCT6AP40227 531 aaKnown RBP20.89■□□□□ 0.94
SCARB2-213ENST00000638680 ATL3Q6DD88 541 aa20.89■□□□□ 0.94
SCARB2-213ENST00000638680 MYRIPQ8NFW9 859 aa20.89■□□□□ 0.94
SCARB2-213ENST00000638680 ZRANB1Q9UGI0 708 aa20.89■□□□□ 0.94
SCARB2-213ENST00000638680 NAA16Q6N069 864 aaPredicted RBP20.89■□□□□ 0.94
SCARB2-213ENST00000638680 PLIN2Q99541 437 aa20.89■□□□□ 0.94
SCARB2-213ENST00000638680 COMMD10Q9Y6G5 202 aa20.89■□□□□ 0.94
SCARB2-213ENST00000638680 ZNF445P59923 1031 aa20.89■□□□□ 0.93
SCARB2-213ENST00000638680 TLDC2A0PJX2 215 aa20.89■□□□□ 0.93
SCARB2-213ENST00000638680 RPS6KB1P23443 525 aa20.89■□□□□ 0.93
SCARB2-213ENST00000638680 CFAP58Q5T655 872 aa20.89■□□□□ 0.93
SCARB2-213ENST00000638680 SYNCQ9H7C4 482 aa20.89■□□□□ 0.93
SCARB2-213ENST00000638680 CALM1P0DP23 149 aa20.89■□□□□ 0.93
SCARB2-213ENST00000638680 CALM2P0DP24 149 aa20.89■□□□□ 0.93
SCARB2-213ENST00000638680 CALM3P0DP25 149 aa20.89■□□□□ 0.93
SCARB2-213ENST00000638680 FERMT1Q9BQL6 677 aa20.89■□□□□ 0.93
SCARB2-213ENST00000638680 MAGEB6P1A0A0J9YX57 407 aa20.88■□□□□ 0.93
SCARB2-213ENST00000638680 AKAP4Q5JQC9 854 aa20.88■□□□□ 0.93
SCARB2-213ENST00000638680 WDR78Q5VTH9 848 aa20.88■□□□□ 0.93
SCARB2-213ENST00000638680 ARFGAP2Q8N6H7 521 aa20.88■□□□□ 0.93
SCARB2-213ENST00000638680 TSGA10Q9BZW7 698 aa20.88■□□□□ 0.93
SCARB2-213ENST00000638680 CLSTN2Q9H4D0 955 aa20.88■□□□□ 0.93
SCARB2-213ENST00000638680 ZNF75DP51815 510 aa20.88■□□□□ 0.93
SCARB2-213ENST00000638680 LINS1Q8NG48 757 aa20.88■□□□□ 0.93
SCARB2-213ENST00000638680 C6orf50Q9HD87 102 aa20.88■□□□□ 0.93
SCARB2-213ENST00000638680 CTNND2Q9UQB3 1225 aa20.88■□□□□ 0.93
SCARB2-213ENST00000638680 CALML3P27482 149 aa20.88■□□□□ 0.93
SCARB2-213ENST00000638680 ELF2Q15723 593 aa20.88■□□□□ 0.93
SCARB2-213ENST00000638680 PHACTR3Q96KR7 559 aa20.88■□□□□ 0.93
SCARB2-213ENST00000638680 CBX8Q9HC52 389 aa20.88■□□□□ 0.93
SCARB2-213ENST00000638680 TNNC1P63316 161 aa20.87■□□□□ 0.93
SCARB2-213ENST00000638680 AFAP1L1Q8TED9 768 aa20.87■□□□□ 0.93
SCARB2-213ENST00000638680 ZBTB16Q05516 673 aa20.87■□□□□ 0.93
SCARB2-213ENST00000638680 CHRNA2Q15822 529 aa20.87■□□□□ 0.93
SCARB2-213ENST00000638680 KRT79Q5XKE5 535 aa20.87■□□□□ 0.93
SCARB2-213ENST00000638680 IQUBQ8NA54 791 aa20.87■□□□□ 0.93
SCARB2-213ENST00000638680 IGSF22Q8N9C0 903 aa20.86■□□□□ 0.93
SCARB2-213ENST00000638680 UBLCP1Q8WVY7 318 aaPredicted RBP20.86■□□□□ 0.93
SCARB2-213ENST00000638680 GADD45BO75293 160 aaPredicted RBP20.86■□□□□ 0.93
SCARB2-213ENST00000638680 USP37Q86T82 979 aa20.86■□□□□ 0.93
SCARB2-213ENST00000638680 CCDC50Q8IVM0 306 aa20.86■□□□□ 0.93
SCARB2-213ENST00000638680 NAPGQ99747 312 aaPredicted RBP20.86■□□□□ 0.93
SCARB2-213ENST00000638680 SAMD15Q9P1V8 674 aa20.86■□□□□ 0.93
SCARB2-213ENST00000638680 SNX14Q9Y5W7 946 aa20.86■□□□□ 0.93
SCARB2-213ENST00000638680 EEF2P13639 858 aaKnown RBP20.86■□□□□ 0.93
SCARB2-213ENST00000638680 MAGEB6Q8N7X4 407 aa20.86■□□□□ 0.93
SCARB2-213ENST00000638680 ADAMTS2O95450 1211 aa20.86■□□□□ 0.93
SCARB2-213ENST00000638680 BICC1Q9H694 974 aaKnown RBP20.86■□□□□ 0.93
SCARB2-213ENST00000638680 KCNK9Q9NPC2 374 aa20.86■□□□□ 0.93
SCARB2-213ENST00000638680 GNAT2P19087 354 aa20.85■□□□□ 0.93
SCARB2-213ENST00000638680 CCDC25Q86WR0 208 aa20.85■□□□□ 0.93
SCARB2-213ENST00000638680 MIGA1Q8NAN2 632 aa20.85■□□□□ 0.93
SCARB2-213ENST00000638680 SREK1Q8WXA9 508 aaKnown RBP20.85■□□□□ 0.93
SCARB2-213ENST00000638680 CARD6Q9BX69 1037 aa20.85■□□□□ 0.93
SCARB2-213ENST00000638680 GPATCH8Q9UKJ3 1502 aaKnown RBP20.85■□□□□ 0.93
SCARB2-213ENST00000638680 DTHD1Q6ZMT9 781 aa20.85■□□□□ 0.93
SCARB2-213ENST00000638680 SLC27A2O14975 620 aa20.85■□□□□ 0.93
SCARB2-213ENST00000638680 ATP2A1O14983 1001 aa20.85■□□□□ 0.93
SCARB2-213ENST00000638680 FAM173BQ6P4H8 233 aa20.85■□□□□ 0.93
SCARB2-213ENST00000638680 A0A1B0GUL7 405 aa20.84■□□□□ 0.93
SCARB2-213ENST00000638680 CCDC160A6NGH7 325 aa20.84■□□□□ 0.93
SCARB2-213ENST00000638680 IRX3P78415 501 aaPredicted RBP20.84■□□□□ 0.93
SCARB2-213ENST00000638680 VWA3AA6NCI4 1184 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms