RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 FAM169AQ9Y6X4 670 aa14.86□□□□□ -0.03
SYNGAP1-208ENST00000629380 CEP57Q86XR8 500 aa14.86□□□□□ -0.03
SYNGAP1-208ENST00000629380 FAM76AQ8TAV0 307 aa14.86□□□□□ -0.03
SYNGAP1-208ENST00000629380 CCDC94Q9BW85 323 aaPredicted RBP14.86□□□□□ -0.03
SYNGAP1-208ENST00000629380 CETN3O15182 167 aa14.86□□□□□ -0.03
SYNGAP1-208ENST00000629380 CUL4BQ13620 913 aa14.86□□□□□ -0.03
SYNGAP1-208ENST00000629380 ARFGAP2Q8N6H7 521 aa14.86□□□□□ -0.03
SYNGAP1-208ENST00000629380 CDCA7LQ96GN5 454 aa14.86□□□□□ -0.03
SYNGAP1-208ENST00000629380 RSPH14Q9UHP6 348 aa14.86□□□□□ -0.03
SYNGAP1-208ENST00000629380 NUP160Q12769 1436 aa14.86□□□□□ -0.03
SYNGAP1-208ENST00000629380 RRAGBQ5VZM2 374 aa14.86□□□□□ -0.03
SYNGAP1-208ENST00000629380 TTC36A6NLP5 189 aa14.86□□□□□ -0.03
SYNGAP1-208ENST00000629380 ASIC1P78348 528 aa14.86□□□□□ -0.03
SYNGAP1-208ENST00000629380 WTAPQ15007 396 aa14.86□□□□□ -0.03
SYNGAP1-208ENST00000629380 VPS52Q8N1B4 723 aa14.86□□□□□ -0.03
SYNGAP1-208ENST00000629380 FRMD4BQ9Y2L6 1034 aa14.86□□□□□ -0.03
SYNGAP1-208ENST00000629380 GIPC1O14908 333 aa14.86□□□□□ -0.03
SYNGAP1-208ENST00000629380 SH3BGRP55822 239 aaPredicted RBP14.86□□□□□ -0.03
SYNGAP1-208ENST00000629380 NBPF6Q5VWK0 638 aa14.86□□□□□ -0.03
SYNGAP1-208ENST00000629380 NBPF5PQ86XG9 351 aaPredicted RBP14.86□□□□□ -0.03
SYNGAP1-208ENST00000629380 NBPF4Q96M43 638 aa14.86□□□□□ -0.03
SYNGAP1-208ENST00000629380 SHANK2Q9UPX8 1470 aa14.86□□□□□ -0.03
SYNGAP1-208ENST00000629380 ARHGAP24Q8N264 748 aa14.85□□□□□ -0.03
SYNGAP1-208ENST00000629380 TMX1Q9H3N1 280 aa14.85□□□□□ -0.03
SYNGAP1-208ENST00000629380 I3L4J1 428 aa14.85□□□□□ -0.03
SYNGAP1-208ENST00000629380 TMPOP42166 694 aaKnown RBP14.85□□□□□ -0.03
SYNGAP1-208ENST00000629380 GEN1Q17RS7 908 aa14.85□□□□□ -0.03
SYNGAP1-208ENST00000629380 SLC26A6Q9BXS9 759 aa14.85□□□□□ -0.03
SYNGAP1-208ENST00000629380 SPDYE3A6NKU9 549 aa14.85□□□□□ -0.03
SYNGAP1-208ENST00000629380 ATP2C2O75185 946 aa14.85□□□□□ -0.03
SYNGAP1-208ENST00000629380 C10orf67Q8IYJ2 551 aa14.85□□□□□ -0.03
SYNGAP1-208ENST00000629380 CCDC114Q96M63 670 aa14.85□□□□□ -0.03
SYNGAP1-208ENST00000629380 IFIT1BQ5T764 474 aaKnown RBP14.85□□□□□ -0.03
SYNGAP1-208ENST00000629380 PHLDB2Q86SQ0 1253 aa14.85□□□□□ -0.03
SYNGAP1-208ENST00000629380 ESR2Q92731 530 aa14.85□□□□□ -0.03
SYNGAP1-208ENST00000629380 RABGAP1Q9Y3P9 1069 aa14.85□□□□□ -0.03
SYNGAP1-208ENST00000629380 PPFIA2O75334 1257 aa14.85□□□□□ -0.03
SYNGAP1-208ENST00000629380 ZNF804AQ7Z570 1209 aa14.85□□□□□ -0.03
SYNGAP1-208ENST00000629380 UBL4BQ8N7F7 174 aa14.85□□□□□ -0.03
SYNGAP1-208ENST00000629380 ZFP91Q96JP5 570 aaPredicted RBP14.85□□□□□ -0.03
SYNGAP1-208ENST00000629380 VCX3AQ9NNX9 186 aa14.85□□□□□ -0.03
SYNGAP1-208ENST00000629380 TTC16Q8NEE8 873 aa14.84□□□□□ -0.03
SYNGAP1-208ENST00000629380 USP16Q9Y5T5 823 aa14.84□□□□□ -0.03
SYNGAP1-208ENST00000629380 CCDC152Q4G0S7 254 aa14.84□□□□□ -0.03
SYNGAP1-208ENST00000629380 CCT2P78371 535 aaKnown RBP14.84□□□□□ -0.03
SYNGAP1-208ENST00000629380 CALCOCO2Q13137 446 aa14.84□□□□□ -0.03
SYNGAP1-208ENST00000629380 NME9Q86XW9 330 aa14.84□□□□□ -0.03
SYNGAP1-208ENST00000629380 ZCRB1Q8TBF4 217 aaKnown RBP14.84□□□□□ -0.03
SYNGAP1-208ENST00000629380 SNRPA1P09661 255 aaKnown RBP14.84□□□□□ -0.03
SYNGAP1-208ENST00000629380 PLCB3Q01970 1234 aa14.84□□□□□ -0.03
SYNGAP1-208ENST00000629380 RTN1Q16799 776 aa14.84□□□□□ -0.03
SYNGAP1-208ENST00000629380 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.84□□□□□ -0.034e-7■■■□□ 18.4
SYNGAP1-208ENST00000629380 RTL1A6NKG5 1358 aa14.84□□□□□ -0.03
SYNGAP1-208ENST00000629380 ACEP12821 1306 aa14.84□□□□□ -0.03
SYNGAP1-208ENST00000629380 E7EVH7 732 aa14.84□□□□□ -0.03
SYNGAP1-208ENST00000629380 CEP85LQ5SZL2 805 aa14.84□□□□□ -0.03
SYNGAP1-208ENST00000629380 GBP6Q6ZN66 633 aa14.84□□□□□ -0.03
SYNGAP1-208ENST00000629380 RSPH3Q86UC2 560 aa14.84□□□□□ -0.03
SYNGAP1-208ENST00000629380 C6orf229H3BNL8 230 aa14.84□□□□□ -0.03
SYNGAP1-208ENST00000629380 CAPN2P17655 700 aa14.84□□□□□ -0.03
SYNGAP1-208ENST00000629380 KIFC2Q96AC6 838 aa14.84□□□□□ -0.03
SYNGAP1-208ENST00000629380 MYD88Q99836 296 aa14.84□□□□□ -0.03
SYNGAP1-208ENST00000629380 MCM6Q14566 821 aa14.83□□□□□ -0.03
SYNGAP1-208ENST00000629380 LMNTD2Q8IXW0 634 aa14.83□□□□□ -0.03
SYNGAP1-208ENST00000629380 VTI1AQ96AJ9 217 aa14.83□□□□□ -0.03
SYNGAP1-208ENST00000629380 MMRN2Q9H8L6 949 aa14.83□□□□□ -0.04
SYNGAP1-208ENST00000629380 SYT1P21579 422 aa14.83□□□□□ -0.04
SYNGAP1-208ENST00000629380 TNPO1Q92973 898 aaKnown RBP14.83□□□□□ -0.04
SYNGAP1-208ENST00000629380 ZNF622Q969S3 477 aaKnown RBP eCLIP14.83□□□□□ -0.041e-6■■■■□ 21.4
SYNGAP1-208ENST00000629380 ABCA5Q8WWZ7 1642 aa14.83□□□□□ -0.04
SYNGAP1-208ENST00000629380 HDXQ7Z353 690 aa14.83□□□□□ -0.04
SYNGAP1-208ENST00000629380 ECHDC1Q9NTX5 307 aa14.83□□□□□ -0.04
SYNGAP1-208ENST00000629380 ORC3Q9UBD5 711 aaPredicted RBP14.83□□□□□ -0.04
SYNGAP1-208ENST00000629380 NBPF11Q86T75 865 aa14.83□□□□□ -0.04
SYNGAP1-208ENST00000629380 CCDC26Q8TAB7 109 aa14.83□□□□□ -0.04
SYNGAP1-208ENST00000629380 SETDB2Q96T68 719 aa14.83□□□□□ -0.04
SYNGAP1-208ENST00000629380 TACC3Q9Y6A5 838 aa14.83□□□□□ -0.04
SYNGAP1-208ENST00000629380 PPIP5K1Q6PFW1 1433 aa14.82□□□□□ -0.04
SYNGAP1-208ENST00000629380 A0A1B0GUA9 196 aa14.82□□□□□ -0.04
SYNGAP1-208ENST00000629380 ZNF830Q96NB3 372 aaPredicted RBP14.82□□□□□ -0.04
SYNGAP1-208ENST00000629380 HS2ST1Q7LGA3 356 aa14.82□□□□□ -0.04
SYNGAP1-208ENST00000629380 RAB11FIP4Q86YS3 637 aa14.82□□□□□ -0.04
SYNGAP1-208ENST00000629380 CNGA4Q8IV77 575 aa14.82□□□□□ -0.04
SYNGAP1-208ENST00000629380 ITIH3Q06033 890 aa14.82□□□□□ -0.04
SYNGAP1-208ENST00000629380 HEATR3Q7Z4Q2 680 aa14.82□□□□□ -0.04
SYNGAP1-208ENST00000629380 GBP7Q8N8V2 638 aaPredicted RBP14.82□□□□□ -0.04
SYNGAP1-208ENST00000629380 CCDC89Q8N998 374 aa14.82□□□□□ -0.04
SYNGAP1-208ENST00000629380 GNAT2P19087 354 aa14.82□□□□□ -0.04
SYNGAP1-208ENST00000629380 HSPA1LP34931 641 aa14.82□□□□□ -0.04
SYNGAP1-208ENST00000629380 UBXN1Q04323 297 aa14.82□□□□□ -0.04
SYNGAP1-208ENST00000629380 GSDMBQ8TAX9 411 aa14.82□□□□□ -0.04
SYNGAP1-208ENST00000629380 STK24Q9Y6E0 443 aa14.82□□□□□ -0.04
SYNGAP1-208ENST00000629380 ADGRF5Q8IZF2 1346 aa14.81□□□□□ -0.04
SYNGAP1-208ENST00000629380 CROCCP2Q86T23 111 aa14.81□□□□□ -0.04
SYNGAP1-208ENST00000629380 SKILP12757 684 aa14.81□□□□□ -0.04
SYNGAP1-208ENST00000629380 VWA3BQ502W6 1294 aa14.81□□□□□ -0.04
SYNGAP1-208ENST00000629380 PARP3Q9Y6F1 533 aa14.81□□□□□ -0.04
SYNGAP1-208ENST00000629380 RPRD2Q5VT52 1461 aaKnown RBP14.81□□□□□ -0.04
SYNGAP1-208ENST00000629380 IL2RBP14784 551 aa14.81□□□□□ -0.04
SYNGAP1-208ENST00000629380 RPL13P26373 211 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms