RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 COL19A1Q14993 1142 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 PPP2R5BQ15173 497 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 IER5LQ5T953 404 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 SLC4A10Q6U841 1118 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 IQCA1Q86XH1 822 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 CENPOQ9BU64 300 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 ODF2LQ9ULJ1 636 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 MAFFQ9ULX9 164 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 PRELID1Q9Y255 219 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 H0YC42 278 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 ZNF189O75820 626 aaPredicted RBP4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 ZNF132P52740 706 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 ATP2B3Q16720 1220 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 DAAM2Q86T65 1068 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 CEP57L1Q8IYX8 460 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 TXLNBQ8N3L3 684 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 MGARPQ8TDB4 240 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 PDGFDQ9GZP0 370 aaPredicted RBP4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 IFT57Q9NWB7 429 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 COMMD8Q9NX08 183 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 FYCO1Q9BQS8 1478 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 ABCC1P33527 1531 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 KIF14Q15058 1648 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 RLBP1P12271 317 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 DNAJA1P31689 397 aaKnown RBP4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 TRAPPC10P48553 1259 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 IKQ13123 557 aaPredicted RBP4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 CCDC178Q5BJE1 867 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 ODR4Q5SWX8 454 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 SDE2Q6IQ49 451 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 NT5DC4Q86YG4 428 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 CCDC114Q96M63 670 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 NAP1L3Q99457 506 aaPredicted RBP4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 MAK16Q9BXY0 300 aaKnown RBP4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 XPO4Q9C0E2 1151 aaKnown RBP4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 MKS1Q9NXB0 559 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 SPATA31E1Q6ZUB1 1445 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 TULP2O00295 520 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 POTEIP0CG38 1075 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 RAB3GAP1Q15042 981 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 MAP9Q49MG5 647 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 LRRC23Q53EV4 343 aaPredicted RBP4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 TTC39BQ5VTQ0 682 aaPredicted RBP4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 ISM2Q6H9L7 571 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 GSDMBQ8TAX9 411 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 L3MBTL2Q969R5 705 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 SPACA7Q96KW9 195 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 BAG1Q99933 345 aaPredicted RBP4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 DISC1Q9NRI5 854 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 ARGLU1Q9NWB6 273 aaPredicted RBP4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 SPATA7Q9P0W8 599 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 CLIP2Q9UDT6 1046 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 H0Y3Z8 333 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 MTA2O94776 668 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 ZNF16P17020 682 aaPredicted RBP4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 EVA1CP58658 441 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 PPP2R5CQ13362 524 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 SRLQ86TD4 932 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 WDR63Q8IWG1 891 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 EFCAB13Q8IY85 973 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 PEX5LQ8IYB4 626 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 STAG2Q8N3U4 1231 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 DCLK2Q8N568 766 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 SNX21Q969T3 373 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 CDHR1Q96JP9 859 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 MTRQ99707 1265 aa4.45□□□□□ -1.7
R3HDM1-220ENST00000628915 MROH1Q8NDA8 1641 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 GRXCR2A6NFK2 248 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 SNUPNO95149 360 aaKnown RBP4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 MMEP08473 750 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 MYBL2P10244 700 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 FERP16591 822 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 OAS2P29728 719 aaKnown RBP4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 TRPC1P48995 793 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 RAD51AP2Q09MP3 1159 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 NOLC1Q14978 699 aaKnown RBP eCLIP4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 CCDC144BQ3MJ40 725 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 CPLX2Q6PUV4 134 aaKnown RBP4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 CCDC186Q7Z3E2 898 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 KCNB2Q92953 911 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 TMEM106CQ9BVX2 250 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 PANK3Q9H999 370 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 BMP2KQ9NSY1 1161 aaPredicted RBP4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.44□□□□□ -1.71e-6■■■■□ 26.2
R3HDM1-220ENST00000628915 ATP6V0A2Q9Y487 856 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 BRCA2P51587 3418 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 STRCQ7RTU9 1775 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 HSPA1AP0DMV8 641 aaKnown RBP4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 HSPA1BP0DMV9 641 aaKnown RBP4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 NOP2P46087 812 aaKnown RBP4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 NEK10Q6ZWH5 1172 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 NANOGNBQ7Z5D8 188 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 IFNL1Q8IU54 200 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 ZNF710Q8N1W2 664 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 FNBP4Q8N3X1 1017 aaPredicted RBP4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 SMARCC1Q92922 1105 aaPredicted RBP4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 SLC7A5P2Q9GIP4 190 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 TNMDQ9H2S6 317 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms