RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 RLFQ13129 1914 aa7.14□□□□□ -1.27
FMR1-217ENST00000620828 PLXNB2O15031 1838 aa7.14□□□□□ -1.27
FMR1-217ENST00000620828 NPHP1O15259 732 aa7.14□□□□□ -1.27
FMR1-217ENST00000620828 MAP3K10Q02779 954 aa7.14□□□□□ -1.27
FMR1-217ENST00000620828 MGAMO43451 1857 aa7.14□□□□□ -1.27
FMR1-217ENST00000620828 RIMBP2O15034 1052 aa7.13□□□□□ -1.27
FMR1-217ENST00000620828 HDLBPQ00341 1268 aaKnown RBP7.13□□□□□ -1.27
FMR1-217ENST00000620828 CEP85Q6P2H3 762 aa7.13□□□□□ -1.27
FMR1-217ENST00000620828 C9orf78Q9NZ63 289 aaPredicted RBP7.13□□□□□ -1.27
FMR1-217ENST00000620828 SUGT1Q9Y2Z0 365 aa7.13□□□□□ -1.27
FMR1-217ENST00000620828 PCDHAC2Q9Y5I4 1007 aa7.13□□□□□ -1.27
FMR1-217ENST00000620828 MYH1P12882 1939 aa7.13□□□□□ -1.27
FMR1-217ENST00000620828 GAKO14976 1311 aa7.13□□□□□ -1.27
FMR1-217ENST00000620828 WNT10BO00744 389 aa7.13□□□□□ -1.27
FMR1-217ENST00000620828 SAPCD2Q86UD0 394 aa7.13□□□□□ -1.27
FMR1-217ENST00000620828 PUM3Q15397 648 aaKnown RBP7.13□□□□□ -1.27
FMR1-217ENST00000620828 CCDC57Q2TAC2 916 aa7.13□□□□□ -1.27
FMR1-217ENST00000620828 LDHAL6AQ6ZMR3 332 aa7.13□□□□□ -1.27
FMR1-217ENST00000620828 SAMD7Q7Z3H4 446 aa7.13□□□□□ -1.27
FMR1-217ENST00000620828 ZC3H12CQ9C0D7 883 aaKnown RBP7.13□□□□□ -1.27
FMR1-217ENST00000620828 ANKIB1Q9P2G1 1089 aa7.13□□□□□ -1.27
FMR1-217ENST00000620828 SLC4A10Q6U841 1118 aa7.13□□□□□ -1.27
FMR1-217ENST00000620828 LAMA4Q16363 1823 aa7.13□□□□□ -1.27
FMR1-217ENST00000620828 TRAF5O00463 557 aa7.12□□□□□ -1.27
FMR1-217ENST00000620828 GNAI3P08754 354 aa7.12□□□□□ -1.27
FMR1-217ENST00000620828 FAM163AQ96GL9 167 aaPredicted RBP7.12□□□□□ -1.27
FMR1-217ENST00000620828 CFHR5Q9BXR6 569 aa7.12□□□□□ -1.27
FMR1-217ENST00000620828 SERPINA10Q9UK55 444 aa7.12□□□□□ -1.27
FMR1-217ENST00000620828 TMEM88BA6NKF7 163 aa7.12□□□□□ -1.27
FMR1-217ENST00000620828 HTRA3P83110 453 aa7.12□□□□□ -1.27
FMR1-217ENST00000620828 PDE3AQ14432 1141 aa7.12□□□□□ -1.27
FMR1-217ENST00000620828 DLK2Q6UY11 383 aa7.12□□□□□ -1.27
FMR1-217ENST00000620828 LPIN2Q92539 896 aa7.12□□□□□ -1.27
FMR1-217ENST00000620828 SALL3Q9BXA9 1300 aa7.12□□□□□ -1.27
FMR1-217ENST00000620828 SPDYE2BA6NHP3 402 aa7.12□□□□□ -1.27
FMR1-217ENST00000620828 C6orf229H3BNL8 230 aa7.12□□□□□ -1.27
FMR1-217ENST00000620828 SEMA3EO15041 775 aa7.12□□□□□ -1.27
FMR1-217ENST00000620828 IPO8O15397 1037 aaKnown RBP7.12□□□□□ -1.27
FMR1-217ENST00000620828 SPDYE6P0CI01 402 aa7.12□□□□□ -1.27
FMR1-217ENST00000620828 IL15P40933 162 aaPredicted RBP7.12□□□□□ -1.27
FMR1-217ENST00000620828 MVPQ14764 893 aaKnown RBP7.12□□□□□ -1.27
FMR1-217ENST00000620828 KIF4BQ2VIQ3 1234 aa7.12□□□□□ -1.27
FMR1-217ENST00000620828 MAP1SQ66K74 1059 aaPredicted RBP7.12□□□□□ -1.27
FMR1-217ENST00000620828 HELBQ8NG08 1087 aaPredicted RBP7.12□□□□□ -1.27
FMR1-217ENST00000620828 HTTP42858 3142 aa7.12□□□□□ -1.27
FMR1-217ENST00000620828 UNCXA6NJT0 531 aa7.12□□□□□ -1.27
FMR1-217ENST00000620828 IGSF3O75054 1194 aa7.12□□□□□ -1.27
FMR1-217ENST00000620828 UBTFL1P0CB47 393 aaPredicted RBP7.12□□□□□ -1.27
FMR1-217ENST00000620828 SCARF1Q14162 830 aa7.12□□□□□ -1.27
FMR1-217ENST00000620828 LDLRAD1Q5T700 205 aa7.12□□□□□ -1.27
FMR1-217ENST00000620828 C20orf194Q5TEA3 1177 aa7.12□□□□□ -1.27
FMR1-217ENST00000620828 DZIP1LQ8IYY4 767 aaKnown RBP7.12□□□□□ -1.27
FMR1-217ENST00000620828 USP17L8P0C7I0 530 aa7.11□□□□□ -1.27
FMR1-217ENST00000620828 GYG1P46976 350 aa7.11□□□□□ -1.27
FMR1-217ENST00000620828 NBPF9Q3BBW0 867 aa7.11□□□□□ -1.27
FMR1-217ENST00000620828 SPDYE2Q495Y8 402 aa7.11□□□□□ -1.27
FMR1-217ENST00000620828 APOBEC3HQ6NTF7 200 aaKnown RBP7.11□□□□□ -1.27
FMR1-217ENST00000620828 PA2G4Q9UQ80 394 aaKnown RBP7.11□□□□□ -1.27
FMR1-217ENST00000620828 ZSWIM8A7E2V4 1837 aa7.11□□□□□ -1.27
FMR1-217ENST00000620828 ZDHHC15Q96MV8 337 aa7.11□□□□□ -1.27
FMR1-217ENST00000620828 MPHOSPH8Q99549 860 aa7.11□□□□□ -1.27
FMR1-217ENST00000620828 GLIS2Q9BZE0 524 aaPredicted RBP7.11□□□□□ -1.27
FMR1-217ENST00000620828 GNAI2P04899 355 aa7.11□□□□□ -1.27
FMR1-217ENST00000620828 ADORA1P30542 326 aa7.11□□□□□ -1.27
FMR1-217ENST00000620828 FKBP1CQ5VVH2 108 aa7.11□□□□□ -1.27
FMR1-217ENST00000620828 ZNF804AQ7Z570 1209 aa7.11□□□□□ -1.27
FMR1-217ENST00000620828 PPP2R3BQ9Y5P8 575 aa7.11□□□□□ -1.27
FMR1-217ENST00000620828 GJA3Q9Y6H8 435 aa7.11□□□□□ -1.27
FMR1-217ENST00000620828 BCAMP50895 628 aa7.1□□□□□ -1.27
FMR1-217ENST00000620828 WBP1LQ9NX94 342 aa7.1□□□□□ -1.27
FMR1-217ENST00000620828 HIBADHP31937 336 aaKnown RBP7.1□□□□□ -1.27
FMR1-217ENST00000620828 VEGFBP49765 207 aa7.1□□□□□ -1.27
FMR1-217ENST00000620828 TTLL5Q6EMB2 1281 aa7.1□□□□□ -1.27
FMR1-217ENST00000620828 HHIPL2Q6UWX4 724 aa7.1□□□□□ -1.27
FMR1-217ENST00000620828 CDC37L1Q7L3B6 337 aa7.1□□□□□ -1.27
FMR1-217ENST00000620828 METTL16Q86W50 562 aaKnown RBP7.1□□□□□ -1.27
FMR1-217ENST00000620828 ADM5C9JUS6 153 aa7.1□□□□□ -1.27
FMR1-217ENST00000620828 NPM3O75607 178 aaKnown RBP7.1□□□□□ -1.27
FMR1-217ENST00000620828 FKBP1BP68106 108 aa7.1□□□□□ -1.27
FMR1-217ENST00000620828 CDCA5Q96FF9 252 aa7.1□□□□□ -1.27
FMR1-217ENST00000620828 TESPA1A2RU30 521 aaPredicted RBP7.1□□□□□ -1.27
FMR1-217ENST00000620828 PRMT6Q96LA8 375 aaPredicted RBP7.1□□□□□ -1.27
FMR1-217ENST00000620828 TFCP2Q12800 502 aa7.09□□□□□ -1.27
FMR1-217ENST00000620828 ZNF112Q9UJU3 913 aa7.09□□□□□ -1.27
FMR1-217ENST00000620828 RCAN3Q9UKA8 241 aa7.09□□□□□ -1.27
FMR1-217ENST00000620828 SLC10A3P09131 477 aa7.09□□□□□ -1.27
FMR1-217ENST00000620828 LMOD1P29536 600 aaPredicted RBP7.09□□□□□ -1.27
FMR1-217ENST00000620828 TBC1D10BQ4KMP7 808 aaPredicted RBP7.09□□□□□ -1.27
FMR1-217ENST00000620828 PANK1Q8TE04 598 aa7.09□□□□□ -1.27
FMR1-217ENST00000620828 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.09□□□□□ -1.27
FMR1-217ENST00000620828 TNRC18O15417 2968 aaPredicted RBP7.09□□□□□ -1.27
FMR1-217ENST00000620828 GTF2IP78347 998 aa7.09□□□□□ -1.27
FMR1-217ENST00000620828 MYH8P13535 1937 aa7.08□□□□□ -1.28
FMR1-217ENST00000620828 PHKA1P46020 1223 aa7.08□□□□□ -1.28
FMR1-217ENST00000620828 RASGRF1Q13972 1273 aa7.08□□□□□ -1.28
FMR1-217ENST00000620828 CCDC102BQ68D86 513 aa7.08□□□□□ -1.28
FMR1-217ENST00000620828 GGA3Q9NZ52 723 aa7.08□□□□□ -1.28
FMR1-217ENST00000620828 H7C1D1 291 aa7.08□□□□□ -1.28
FMR1-217ENST00000620828 MOGSQ13724 837 aa7.08□□□□□ -1.28
FMR1-217ENST00000620828 ANGEL2Q5VTE6 544 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms