RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 AIMP1Q12904 312 aaKnown RBP11.24□□□□□ -0.61
TNFAIP3-210ENST00000620204 CCDC93Q567U6 631 aa11.24□□□□□ -0.61
TNFAIP3-210ENST00000620204 HSP90AB3PQ58FF7 597 aa11.24□□□□□ -0.61
TNFAIP3-210ENST00000620204 EVI5LQ96CN4 794 aa11.24□□□□□ -0.61
TNFAIP3-210ENST00000620204 KIAA1468Q9P260 1216 aa11.24□□□□□ -0.61
TNFAIP3-210ENST00000620204 PARP3Q9Y6F1 533 aa11.24□□□□□ -0.61
TNFAIP3-210ENST00000620204 MAP3K19Q56UN5 1328 aa11.24□□□□□ -0.61
TNFAIP3-210ENST00000620204 SETD1BQ9UPS6 1966 aaKnown RBP11.24□□□□□ -0.61
TNFAIP3-210ENST00000620204 TMEM232C9JQI7 657 aa11.24□□□□□ -0.61
TNFAIP3-210ENST00000620204 RESTQ13127 1097 aa11.24□□□□□ -0.61
TNFAIP3-210ENST00000620204 NECTIN1Q15223 517 aa11.24□□□□□ -0.61
TNFAIP3-210ENST00000620204 DPF2Q92785 391 aa11.24□□□□□ -0.61
TNFAIP3-210ENST00000620204 TM6SF1Q9BZW5 370 aa11.24□□□□□ -0.61
TNFAIP3-210ENST00000620204 OSBPL5Q9H0X9 879 aaPredicted RBP11.24□□□□□ -0.61
TNFAIP3-210ENST00000620204 ACBD3Q9H3P7 528 aa11.24□□□□□ -0.61
TNFAIP3-210ENST00000620204 RAI14Q9P0K7 980 aa11.24□□□□□ -0.61
TNFAIP3-210ENST00000620204 NPHP4O75161 1426 aaPredicted RBP11.24□□□□□ -0.61
TNFAIP3-210ENST00000620204 ATP2B1P20020 1258 aa11.24□□□□□ -0.61
TNFAIP3-210ENST00000620204 MTHFSDQ2M296 383 aaKnown RBP11.24□□□□□ -0.61
TNFAIP3-210ENST00000620204 CT47A1Q5JQC4 288 aaPredicted RBP11.24□□□□□ -0.61
TNFAIP3-210ENST00000620204 SIRT1Q96EB6 747 aa11.24□□□□□ -0.61
TNFAIP3-210ENST00000620204 FAM204AQ9H8W3 233 aa11.24□□□□□ -0.61
TNFAIP3-210ENST00000620204 PCDHA7Q9UN72 937 aa11.24□□□□□ -0.61
TNFAIP3-210ENST00000620204 PTPDC1A2A3K4 754 aa11.23□□□□□ -0.61
TNFAIP3-210ENST00000620204 CPLX1O14810 134 aa11.23□□□□□ -0.61
TNFAIP3-210ENST00000620204 CBFA2T2O43439 604 aa11.23□□□□□ -0.61
TNFAIP3-210ENST00000620204 ZNF569Q5MCW4 686 aa11.23□□□□□ -0.61
TNFAIP3-210ENST00000620204 ABCB6Q9NP58 842 aa11.23□□□□□ -0.61
TNFAIP3-210ENST00000620204 CEP170BQ9Y4F5 1589 aaPredicted RBP11.23□□□□□ -0.61
TNFAIP3-210ENST00000620204 FKBP15Q5T1M5 1219 aa11.23□□□□□ -0.61
TNFAIP3-210ENST00000620204 TTC19Q6DKK2 380 aaPredicted RBP11.23□□□□□ -0.61
TNFAIP3-210ENST00000620204 KRT28Q7Z3Y7 464 aa11.23□□□□□ -0.61
TNFAIP3-210ENST00000620204 MPHOSPH8Q99549 860 aa11.23□□□□□ -0.61
TNFAIP3-210ENST00000620204 PHLPP2Q6ZVD8 1323 aa11.23□□□□□ -0.61
TNFAIP3-210ENST00000620204 ADGRB2O60241 1585 aa11.23□□□□□ -0.61
TNFAIP3-210ENST00000620204 PLEKHG3A1L390 1219 aa11.23□□□□□ -0.61
TNFAIP3-210ENST00000620204 TFRCP02786 760 aaKnown RBP11.23□□□□□ -0.61
TNFAIP3-210ENST00000620204 TXLNAP40222 546 aa11.23□□□□□ -0.61
TNFAIP3-210ENST00000620204 TDO2P48775 406 aa11.23□□□□□ -0.61
TNFAIP3-210ENST00000620204 TOB2Q14106 344 aaPredicted RBP11.23□□□□□ -0.61
TNFAIP3-210ENST00000620204 SSH3Q8TE77 659 aa11.23□□□□□ -0.61
TNFAIP3-210ENST00000620204 PES1O00541 588 aaKnown RBP11.22□□□□□ -0.61
TNFAIP3-210ENST00000620204 CLGNO14967 610 aa11.22□□□□□ -0.61
TNFAIP3-210ENST00000620204 ATP8B1O43520 1251 aa11.22□□□□□ -0.61
TNFAIP3-210ENST00000620204 KIF5CO60282 957 aa11.22□□□□□ -0.61
TNFAIP3-210ENST00000620204 RBM43Q6ZSC3 357 aaKnown RBP11.22□□□□□ -0.61
TNFAIP3-210ENST00000620204 RABGGTAQ92696 567 aa11.22□□□□□ -0.61
TNFAIP3-210ENST00000620204 ERLIN2O94905 339 aa11.22□□□□□ -0.61
TNFAIP3-210ENST00000620204 KLHL10Q6JEL2 608 aa11.22□□□□□ -0.61
TNFAIP3-210ENST00000620204 GIMAP7Q8NHV1 300 aa11.22□□□□□ -0.61
TNFAIP3-210ENST00000620204 BRMS1Q9HCU9 246 aa11.22□□□□□ -0.61
TNFAIP3-210ENST00000620204 RDXP35241 583 aaKnown RBP11.22□□□□□ -0.61
TNFAIP3-210ENST00000620204 CCT5P48643 541 aa11.22□□□□□ -0.61
TNFAIP3-210ENST00000620204 CHRNA2Q15822 529 aa11.22□□□□□ -0.61
TNFAIP3-210ENST00000620204 LONRF3Q496Y0 759 aa11.22□□□□□ -0.61
TNFAIP3-210ENST00000620204 KLHDC4Q8TBB5 520 aa11.22□□□□□ -0.61
TNFAIP3-210ENST00000620204 YY1AP1Q9H869 796 aa11.22□□□□□ -0.61
TNFAIP3-210ENST00000620204 FANCLQ9NW38 375 aa11.22□□□□□ -0.61
TNFAIP3-210ENST00000620204 ZNF202O95125 648 aa11.21□□□□□ -0.61
TNFAIP3-210ENST00000620204 TUBB4AP04350 444 aa11.21□□□□□ -0.61
TNFAIP3-210ENST00000620204 TOGARAM2Q6ZUX3 1019 aa11.21□□□□□ -0.61
TNFAIP3-210ENST00000620204 ZNF589Q86UQ0 364 aaPredicted RBP11.21□□□□□ -0.61
TNFAIP3-210ENST00000620204 TTC41PQ6P2S7 1318 aa11.21□□□□□ -0.61
TNFAIP3-210ENST00000620204 CCDC151A5D8V7 595 aa11.21□□□□□ -0.61
TNFAIP3-210ENST00000620204 FBXW10Q5XX13 1052 aa11.21□□□□□ -0.61
TNFAIP3-210ENST00000620204 TRIM65Q6PJ69 517 aa11.21□□□□□ -0.61
TNFAIP3-210ENST00000620204 LRRC59Q96AG4 307 aaKnown RBP11.21□□□□□ -0.61
TNFAIP3-210ENST00000620204 CXorf56Q9H5V9 222 aa11.21□□□□□ -0.61
TNFAIP3-210ENST00000620204 GJB4Q9NTQ9 266 aa11.21□□□□□ -0.61
TNFAIP3-210ENST00000620204 MYO3AQ8NEV4 1616 aa11.21□□□□□ -0.61
TNFAIP3-210ENST00000620204 CPS1P31327 1500 aa11.21□□□□□ -0.62
TNFAIP3-210ENST00000620204 CD163L1Q9NR16 1453 aa11.21□□□□□ -0.62
TNFAIP3-210ENST00000620204 KIAA0232Q92628 1395 aa11.21□□□□□ -0.62
TNFAIP3-210ENST00000620204 ARHGAP6O43182 974 aa11.21□□□□□ -0.62
TNFAIP3-210ENST00000620204 ZMYND10O75800 440 aa11.21□□□□□ -0.62
TNFAIP3-210ENST00000620204 SCRN1Q12765 414 aa11.21□□□□□ -0.62
TNFAIP3-210ENST00000620204 NLRP2Q9NX02 1062 aa11.21□□□□□ -0.62
TNFAIP3-210ENST00000620204 RCOR1Q9UKL0 485 aa11.21□□□□□ -0.62
TNFAIP3-210ENST00000620204 PNPLA6Q8IY17 1366 aa11.2□□□□□ -0.62
TNFAIP3-210ENST00000620204 ECM2O94769 699 aaPredicted RBP11.2□□□□□ -0.62
TNFAIP3-210ENST00000620204 CHGBP05060 677 aa11.2□□□□□ -0.62
TNFAIP3-210ENST00000620204 MAP4K1Q92918 833 aa11.2□□□□□ -0.62
TNFAIP3-210ENST00000620204 HIP1O00291 1037 aa11.2□□□□□ -0.62
TNFAIP3-210ENST00000620204 EBAG9O00559 213 aa11.2□□□□□ -0.62
TNFAIP3-210ENST00000620204 SPTLC2O15270 562 aa11.2□□□□□ -0.62
TNFAIP3-210ENST00000620204 ATP6V1AP38606 617 aa11.2□□□□□ -0.62
TNFAIP3-210ENST00000620204 MTF1Q14872 753 aa11.2□□□□□ -0.62
TNFAIP3-210ENST00000620204 TRMT44Q8IYL2 757 aaKnown RBP11.2□□□□□ -0.62
TNFAIP3-210ENST00000620204 RIN2Q8WYP3 895 aaPredicted RBP11.2□□□□□ -0.62
TNFAIP3-210ENST00000620204 CRACR2AQ9BSW2 395 aa11.2□□□□□ -0.62
TNFAIP3-210ENST00000620204 CLIC4Q9Y696 253 aa11.2□□□□□ -0.62
TNFAIP3-210ENST00000620204 ATP7BP35670 1465 aa11.2□□□□□ -0.62
TNFAIP3-210ENST00000620204 EPB41L2O43491 1005 aaKnown RBP11.2□□□□□ -0.62
TNFAIP3-210ENST00000620204 SYKP43405 635 aa11.2□□□□□ -0.62
TNFAIP3-210ENST00000620204 SPECC1Q5M775 1068 aa11.2□□□□□ -0.62
TNFAIP3-210ENST00000620204 MCTP2Q6DN12 878 aa11.2□□□□□ -0.62
TNFAIP3-210ENST00000620204 MMS22LQ6ZRQ5 1243 aa11.2□□□□□ -0.62
TNFAIP3-210ENST00000620204 JPH2Q9BR39 696 aaPredicted RBP11.2□□□□□ -0.62
TNFAIP3-210ENST00000620204 C19orf44Q9H6X5 657 aa11.2□□□□□ -0.62
TNFAIP3-210ENST00000620204 MKRN1Q9UHC7 482 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms