RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 EAF2Q96CJ1 260 aaPredicted RBP5.67□□□□□ -1.5
SYCP1-210ENST00000618516 CCDC136Q96JN2 1154 aa5.67□□□□□ -1.5
SYCP1-210ENST00000618516 ANTXR1Q9H6X2 564 aa5.67□□□□□ -1.5
SYCP1-210ENST00000618516 TDRD3Q9H7E2 651 aaKnown RBP5.67□□□□□ -1.5
SYCP1-210ENST00000618516 ZBTB40Q9NUA8 1239 aa5.67□□□□□ -1.5
SYCP1-210ENST00000618516 GGA3Q9NZ52 723 aa5.67□□□□□ -1.5
SYCP1-210ENST00000618516 TSKSQ9UJT2 592 aa5.67□□□□□ -1.5
SYCP1-210ENST00000618516 USP17L3A6NCW0 530 aa5.66□□□□□ -1.5
SYCP1-210ENST00000618516 USP17L4A6NCW7 530 aa5.66□□□□□ -1.5
SYCP1-210ENST00000618516 FAM196BA6NMK8 535 aa5.66□□□□□ -1.5
SYCP1-210ENST00000618516 TRIM6-TRIM34B2RNG4 842 aa5.66□□□□□ -1.5
SYCP1-210ENST00000618516 HMMRO75330 724 aa5.66□□□□□ -1.5
SYCP1-210ENST00000618516 ANGEL2Q5VTE6 544 aaKnown RBP5.66□□□□□ -1.5
SYCP1-210ENST00000618516 CCDC102BQ68D86 513 aa5.66□□□□□ -1.5
SYCP1-210ENST00000618516 MIGA2Q7L4E1 593 aa5.66□□□□□ -1.5
SYCP1-210ENST00000618516 USP17L1Q7RTZ2 530 aa5.66□□□□□ -1.5
SYCP1-210ENST00000618516 USP48Q86UV5 1035 aa5.66□□□□□ -1.5
SYCP1-210ENST00000618516 DZIP1Q86YF9 867 aaKnown RBP5.66□□□□□ -1.5
SYCP1-210ENST00000618516 CDAN1Q8IWY9 1227 aa5.66□□□□□ -1.5
SYCP1-210ENST00000618516 RILPL2Q969X0 211 aa5.66□□□□□ -1.5
SYCP1-210ENST00000618516 ANKRD2Q9GZV1 360 aa5.66□□□□□ -1.5
SYCP1-210ENST00000618516 HACL1Q9UJ83 578 aa5.66□□□□□ -1.5
SYCP1-210ENST00000618516 ARFGEF2Q9Y6D5 1785 aa5.66□□□□□ -1.5
SYCP1-210ENST00000618516 ANKRD31Q8N7Z5 1873 aa5.66□□□□□ -1.5
SYCP1-210ENST00000618516 LAMB4A4D0S4 1761 aa5.66□□□□□ -1.5
SYCP1-210ENST00000618516 GOLIM4O00461 696 aa5.66□□□□□ -1.5
SYCP1-210ENST00000618516 IGHDP01880 384 aa5.66□□□□□ -1.5
SYCP1-210ENST00000618516 RFX5P48382 616 aaPredicted RBP5.66□□□□□ -1.5
SYCP1-210ENST00000618516 ATP8B2P98198 1209 aa5.66□□□□□ -1.5
SYCP1-210ENST00000618516 RASGRF1Q13972 1273 aa5.66□□□□□ -1.5
SYCP1-210ENST00000618516 KRT26Q7Z3Y9 468 aa5.66□□□□□ -1.5
SYCP1-210ENST00000618516 CLASRPQ8N2M8 674 aaKnown RBP5.66□□□□□ -1.5
SYCP1-210ENST00000618516 CERS5Q8N5B7 392 aa5.66□□□□□ -1.5
SYCP1-210ENST00000618516 SUPT20HQ8NEM7 779 aa5.66□□□□□ -1.5
SYCP1-210ENST00000618516 COL11A2P13942 1736 aaPredicted RBP5.66□□□□□ -1.5
SYCP1-210ENST00000618516 RGPD3A6NKT7 1758 aaPredicted RBP5.66□□□□□ -1.5
SYCP1-210ENST00000618516 RGPD4Q7Z3J3 1758 aa5.66□□□□□ -1.5
SYCP1-210ENST00000618516 SCN7AQ01118 1682 aa5.66□□□□□ -1.5
SYCP1-210ENST00000618516 USP17L8P0C7I0 530 aa5.65□□□□□ -1.5
SYCP1-210ENST00000618516 IL15P40933 162 aaPredicted RBP5.65□□□□□ -1.5
SYCP1-210ENST00000618516 RHPN1Q8TCX5 695 aa5.65□□□□□ -1.5
SYCP1-210ENST00000618516 DBNLQ9UJU6 430 aaKnown RBP5.65□□□□□ -1.5
SYCP1-210ENST00000618516 MTMR7Q9Y216 660 aa5.65□□□□□ -1.5
SYCP1-210ENST00000618516 RTL9Q8NET4 1388 aa5.65□□□□□ -1.5
SYCP1-210ENST00000618516 MS4A1P11836 297 aa5.65□□□□□ -1.5
SYCP1-210ENST00000618516 ZAP70P43403 619 aa5.65□□□□□ -1.5
SYCP1-210ENST00000618516 KIF4BQ2VIQ3 1234 aa5.65□□□□□ -1.5
SYCP1-210ENST00000618516 TNNI3KQ59H18 835 aa5.65□□□□□ -1.5
SYCP1-210ENST00000618516 PSMD1Q99460 953 aa5.65□□□□□ -1.5
SYCP1-210ENST00000618516 TAF1DQ9H5J8 278 aaPredicted RBP5.65□□□□□ -1.5
SYCP1-210ENST00000618516 FPGT-TNNI3KV9GXZ4 949 aa5.65□□□□□ -1.5
SYCP1-210ENST00000618516 COL4A5P29400 1685 aa5.65□□□□□ -1.51
SYCP1-210ENST00000618516 KIF3CO14782 793 aa5.65□□□□□ -1.51
SYCP1-210ENST00000618516 HIRAP54198 1017 aaPredicted RBP5.65□□□□□ -1.51
SYCP1-210ENST00000618516 TNIP1Q15025 636 aa5.65□□□□□ -1.51
SYCP1-210ENST00000618516 DLGAP5Q15398 846 aa5.65□□□□□ -1.51
SYCP1-210ENST00000618516 RABL6Q3YEC7 729 aaPredicted RBP5.65□□□□□ -1.51
SYCP1-210ENST00000618516 CCDC158Q5M9N0 1113 aa5.65□□□□□ -1.51
SYCP1-210ENST00000618516 CNTROBQ8N137 903 aa5.65□□□□□ -1.51
SYCP1-210ENST00000618516 LPIN2Q92539 896 aa5.65□□□□□ -1.51
SYCP1-210ENST00000618516 AATFQ9NY61 560 aaKnown RBP eCLIP5.65□□□□□ -1.51
SYCP1-210ENST00000618516 ISY1Q9ULR0 285 aaKnown RBP5.65□□□□□ -1.51
SYCP1-210ENST00000618516 MROH5Q6ZUA9 1318 aa5.65□□□□□ -1.51
SYCP1-210ENST00000618516 POTECB2RU33 542 aa5.64□□□□□ -1.51
SYCP1-210ENST00000618516 CELF2O95319 508 aaKnown RBP5.64□□□□□ -1.51
SYCP1-210ENST00000618516 PDE3AQ14432 1141 aa5.64□□□□□ -1.51
SYCP1-210ENST00000618516 CC2D2BQ6DHV5 1058 aa5.64□□□□□ -1.51
SYCP1-210ENST00000618516 CCDC84Q86UT8 332 aaPredicted RBP5.64□□□□□ -1.51
SYCP1-210ENST00000618516 SULF1Q8IWU6 871 aa5.64□□□□□ -1.51
SYCP1-210ENST00000618516 GPC2Q8N158 579 aa5.64□□□□□ -1.51
SYCP1-210ENST00000618516 PRMT6Q96LA8 375 aaPredicted RBP5.64□□□□□ -1.51
SYCP1-210ENST00000618516 PLA2G12BQ9BX93 195 aa5.64□□□□□ -1.51
SYCP1-210ENST00000618516 GPRC5DQ9NZD1 345 aa5.64□□□□□ -1.51
SYCP1-210ENST00000618516 SAP30BPQ9UHR5 308 aaKnown RBP5.64□□□□□ -1.51
SYCP1-210ENST00000618516 PDZRN3Q9UPQ7 1066 aa5.64□□□□□ -1.51
SYCP1-210ENST00000618516 HDAC5Q9UQL6 1122 aa5.64□□□□□ -1.51
SYCP1-210ENST00000618516 LEMD3Q9Y2U8 911 aa5.64□□□□□ -1.51
SYCP1-210ENST00000618516 FZD9O00144 591 aa5.64□□□□□ -1.51
SYCP1-210ENST00000618516 MYCP01106 439 aaPredicted RBP5.64□□□□□ -1.51
SYCP1-210ENST00000618516 MCAMP43121 646 aa5.64□□□□□ -1.51
SYCP1-210ENST00000618516 CFAP100Q494V2 611 aa5.64□□□□□ -1.51
SYCP1-210ENST00000618516 LRRCC1Q9C099 1032 aa5.64□□□□□ -1.51
SYCP1-210ENST00000618516 MYOZ2Q9NPC6 264 aa5.64□□□□□ -1.51
SYCP1-210ENST00000618516 GNL3LQ9NVN8 582 aaKnown RBP5.64□□□□□ -1.51
SYCP1-210ENST00000618516 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.64□□□□□ -1.51
SYCP1-210ENST00000618516 CCDC88AQ3V6T2 1871 aa5.63□□□□□ -1.51
SYCP1-210ENST00000618516 APPP05067 770 aa5.63□□□□□ -1.51
SYCP1-210ENST00000618516 LDHBP07195 334 aaKnown RBP5.63□□□□□ -1.51
SYCP1-210ENST00000618516 RSBN1LQ6PCB5 846 aaPredicted RBP5.63□□□□□ -1.51
SYCP1-210ENST00000618516 DCPSQ96C86 337 aaKnown RBP5.63□□□□□ -1.51
SYCP1-210ENST00000618516 TMEM39BQ9GZU3 492 aa5.63□□□□□ -1.51
SYCP1-210ENST00000618516 IQCA1LA6NCM1 817 aa5.63□□□□□ -1.51
SYCP1-210ENST00000618516 C1QTNF8P60827 252 aa5.63□□□□□ -1.51
SYCP1-210ENST00000618516 UBE4AQ14139 1066 aa5.63□□□□□ -1.51
SYCP1-210ENST00000618516 PODNQ7Z5L7 613 aa5.63□□□□□ -1.51
SYCP1-210ENST00000618516 MAGEB6Q8N7X4 407 aa5.63□□□□□ -1.51
SYCP1-210ENST00000618516 COA1Q9GZY4 146 aa5.63□□□□□ -1.51
SYCP1-210ENST00000618516 COPRSQ9NQ92 184 aa5.63□□□□□ -1.51
SYCP1-210ENST00000618516 HMG20BQ9P0W2 317 aa5.63□□□□□ -1.51
SYCP1-210ENST00000618516 SPEF2Q9C093 1822 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms