RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 KCNQ5Q9NR82 932 aa9.51□□□□□ -0.89
SCAMP1-206ENST00000618166 RIC1Q4ADV7 1423 aa9.51□□□□□ -0.89
SCAMP1-206ENST00000618166 GTF2E1P29083 439 aaPredicted RBP9.5□□□□□ -0.89
SCAMP1-206ENST00000618166 GGCXP38435 758 aa9.5□□□□□ -0.89
SCAMP1-206ENST00000618166 GRIPAP1Q4V328 841 aa9.5□□□□□ -0.89
SCAMP1-206ENST00000618166 DPF2Q92785 391 aa9.5□□□□□ -0.89
SCAMP1-206ENST00000618166 CDCA7LQ96GN5 454 aa9.5□□□□□ -0.89
SCAMP1-206ENST00000618166 RTFDC1Q9BY42 306 aaPredicted RBP9.5□□□□□ -0.89
SCAMP1-206ENST00000618166 HEG1Q9ULI3 1381 aa9.5□□□□□ -0.89
SCAMP1-206ENST00000618166 MTFR1Q15390 333 aa9.5□□□□□ -0.89
SCAMP1-206ENST00000618166 HLFQ16534 295 aa9.5□□□□□ -0.89
SCAMP1-206ENST00000618166 TRIM67Q6ZTA4 783 aa9.5□□□□□ -0.89
SCAMP1-206ENST00000618166 TMUB1Q9BVT8 246 aa9.5□□□□□ -0.89
SCAMP1-206ENST00000618166 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.5□□□□□ -0.89
SCAMP1-206ENST00000618166 FAM198AQ9UFP1 575 aa9.5□□□□□ -0.89
SCAMP1-206ENST00000618166 NR2E3Q9Y5X4 410 aa9.5□□□□□ -0.89
SCAMP1-206ENST00000618166 KIF7Q2M1P5 1343 aa9.49□□□□□ -0.89
SCAMP1-206ENST00000618166 KDM3BQ7LBC6 1761 aa9.49□□□□□ -0.89
SCAMP1-206ENST00000618166 PRSS12P56730 875 aa9.49□□□□□ -0.89
SCAMP1-206ENST00000618166 PTPN12Q05209 780 aaKnown RBP9.49□□□□□ -0.89
SCAMP1-206ENST00000618166 CRHR2Q13324 411 aa9.49□□□□□ -0.89
SCAMP1-206ENST00000618166 TTLL12Q14166 644 aaPredicted RBP9.49□□□□□ -0.89
SCAMP1-206ENST00000618166 CLEC4GQ6UXB4 293 aa9.49□□□□□ -0.89
SCAMP1-206ENST00000618166 NBPF11Q86T75 865 aa9.49□□□□□ -0.89
SCAMP1-206ENST00000618166 FAM161BQ96MY7 647 aa9.49□□□□□ -0.89
SCAMP1-206ENST00000618166 VPS33BQ9H267 617 aa9.49□□□□□ -0.89
SCAMP1-206ENST00000618166 ATP6V0A2Q9Y487 856 aa9.49□□□□□ -0.89
SCAMP1-206ENST00000618166 RTL9Q8NET4 1388 aa9.48□□□□□ -0.89
SCAMP1-206ENST00000618166 C3orf80F5H4A9 247 aa9.48□□□□□ -0.89
SCAMP1-206ENST00000618166 MAP3K7O43318 606 aa9.48□□□□□ -0.89
SCAMP1-206ENST00000618166 ALDH1A1P00352 501 aa9.48□□□□□ -0.89
SCAMP1-206ENST00000618166 MAP3K12Q12852 859 aa9.48□□□□□ -0.89
SCAMP1-206ENST00000618166 PRKG1Q13976 671 aa9.48□□□□□ -0.89
SCAMP1-206ENST00000618166 SCARF1Q14162 830 aa9.48□□□□□ -0.89
SCAMP1-206ENST00000618166 SPRYD7Q5W111 196 aa9.48□□□□□ -0.89
SCAMP1-206ENST00000618166 SULT6B1Q6IMI4 303 aa9.48□□□□□ -0.89
SCAMP1-206ENST00000618166 DPP8Q6V1X1 898 aaPredicted RBP9.48□□□□□ -0.89
SCAMP1-206ENST00000618166 NPM2Q86SE8 214 aaKnown RBP9.48□□□□□ -0.89
SCAMP1-206ENST00000618166 TTC5Q8N0Z6 440 aa9.48□□□□□ -0.89
SCAMP1-206ENST00000618166 TATDN2Q93075 761 aa9.48□□□□□ -0.89
SCAMP1-206ENST00000618166 CRAMP1Q96RY5 1269 aa9.48□□□□□ -0.89
SCAMP1-206ENST00000618166 HTATIP2Q9BUP3 242 aa9.48□□□□□ -0.89
SCAMP1-206ENST00000618166 DBNDD1Q9H9R9 158 aa9.48□□□□□ -0.89
SCAMP1-206ENST00000618166 FZD1Q9UP38 647 aa9.48□□□□□ -0.89
SCAMP1-206ENST00000618166 CACNA1AO00555 2505 aa9.47□□□□□ -0.89
SCAMP1-206ENST00000618166 SP3Q02447 781 aa9.47□□□□□ -0.89
SCAMP1-206ENST00000618166 NBR1Q14596 966 aa9.47□□□□□ -0.89
SCAMP1-206ENST00000618166 SUPT20HQ8NEM7 779 aa9.47□□□□□ -0.89
SCAMP1-206ENST00000618166 RBM17Q96I25 401 aaKnown RBP9.47□□□□□ -0.89
SCAMP1-206ENST00000618166 GDF15Q99988 308 aa9.47□□□□□ -0.89
SCAMP1-206ENST00000618166 ZNF652Q9Y2D9 606 aa9.47□□□□□ -0.89
SCAMP1-206ENST00000618166 IRS2Q9Y4H2 1338 aa9.47□□□□□ -0.89
SCAMP1-206ENST00000618166 DUOX1Q9NRD9 1551 aa9.47□□□□□ -0.89
SCAMP1-206ENST00000618166 TNFRSF10AO00220 468 aa9.46□□□□□ -0.9
SCAMP1-206ENST00000618166 LRIT3Q3SXY7 679 aa9.46□□□□□ -0.9
SCAMP1-206ENST00000618166 SIN3AQ96ST3 1273 aa9.46□□□□□ -0.9
SCAMP1-206ENST00000618166 CDH23Q9H251 3354 aa9.45□□□□□ -0.9
SCAMP1-206ENST00000618166 ABCC4O15439 1325 aa9.45□□□□□ -0.9
SCAMP1-206ENST00000618166 KCNQ3O43525 872 aa9.45□□□□□ -0.9
SCAMP1-206ENST00000618166 DGAT1O75907 488 aa9.45□□□□□ -0.9
SCAMP1-206ENST00000618166 ARHGAP39Q9C0H5 1083 aa9.45□□□□□ -0.9
SCAMP1-206ENST00000618166 USP16Q9Y5T5 823 aa9.45□□□□□ -0.9
SCAMP1-206ENST00000618166 ZSWIM8A7E2V4 1837 aa9.45□□□□□ -0.9
SCAMP1-206ENST00000618166 NBPF26B4DH59 902 aa9.44□□□□□ -0.9
SCAMP1-206ENST00000618166 TCIRG1Q13488 830 aa9.44□□□□□ -0.9
SCAMP1-206ENST00000618166 ZNF790Q6PG37 636 aa9.44□□□□□ -0.9
SCAMP1-206ENST00000618166 TEX13AQ9BXU3 409 aaPredicted RBP9.44□□□□□ -0.9
SCAMP1-206ENST00000618166 PNMA3Q9UL41 463 aa9.44□□□□□ -0.9
SCAMP1-206ENST00000618166 RPS12P25398 132 aaKnown RBP9.43□□□□□ -0.9
SCAMP1-206ENST00000618166 BMP8BP34820 402 aa9.43□□□□□ -0.9
SCAMP1-206ENST00000618166 PKDCCQ504Y2 493 aa9.43□□□□□ -0.9
SCAMP1-206ENST00000618166 LCE2AQ5TA79 106 aaPredicted RBP9.43□□□□□ -0.9
SCAMP1-206ENST00000618166 NBPF10Q6P3W6 841 aaKnown RBP9.43□□□□□ -0.9
SCAMP1-206ENST00000618166 PTPN18Q99952 460 aa9.43□□□□□ -0.9
SCAMP1-206ENST00000618166 ZMYND8Q9ULU4 1186 aaPredicted RBP9.43□□□□□ -0.9
SCAMP1-206ENST00000618166 UBN2Q6ZU65 1347 aa9.42□□□□□ -0.9
SCAMP1-206ENST00000618166 SYNGAP1Q96PV0 1343 aa9.42□□□□□ -0.9
SCAMP1-206ENST00000618166 MANSC4A6NHS7 340 aaPredicted RBP9.42□□□□□ -0.9
SCAMP1-206ENST00000618166 FARP2O94887 1054 aaPredicted RBP9.42□□□□□ -0.9
SCAMP1-206ENST00000618166 GJA8P48165 433 aa9.42□□□□□ -0.9
SCAMP1-206ENST00000618166 MAFAQ8NHW3 353 aaPredicted RBP9.42□□□□□ -0.9
SCAMP1-206ENST00000618166 CLMNQ96JQ2 1002 aa9.42□□□□□ -0.9
SCAMP1-206ENST00000618166 TMX4Q9H1E5 349 aaPredicted RBP9.42□□□□□ -0.9
SCAMP1-206ENST00000618166 ECE2O60344 883 aa9.41□□□□□ -0.9
SCAMP1-206ENST00000618166 SYN1P17600 705 aa9.41□□□□□ -0.9
SCAMP1-206ENST00000618166 GPTP24298 496 aa9.41□□□□□ -0.9
SCAMP1-206ENST00000618166 MTHFSDQ2M296 383 aaKnown RBP9.41□□□□□ -0.9
SCAMP1-206ENST00000618166 LDLRAD1Q5T700 205 aa9.41□□□□□ -0.9
SCAMP1-206ENST00000618166 SUSD4Q5VX71 490 aa9.41□□□□□ -0.9
SCAMP1-206ENST00000618166 TREML4Q6UXN2 200 aa9.41□□□□□ -0.9
SCAMP1-206ENST00000618166 TDHQ8IZJ6 230 aa9.41□□□□□ -0.9
SCAMP1-206ENST00000618166 NECTIN2Q92692 538 aa9.41□□□□□ -0.9
SCAMP1-206ENST00000618166 SYMPKQ92797 1274 aaKnown RBP9.41□□□□□ -0.9
SCAMP1-206ENST00000618166 EMID1Q96A84 441 aaPredicted RBP9.41□□□□□ -0.9
SCAMP1-206ENST00000618166 RNF40O75150 1001 aa9.4□□□□□ -0.9
SCAMP1-206ENST00000618166 GJA5P36382 358 aa9.4□□□□□ -0.9
SCAMP1-206ENST00000618166 SLC19A1P41440 591 aa9.4□□□□□ -0.9
SCAMP1-206ENST00000618166 MAGEA10P43363 369 aaPredicted RBP9.4□□□□□ -0.9
SCAMP1-206ENST00000618166 ZNF280AP59817 542 aaPredicted RBP9.4□□□□□ -0.9
SCAMP1-206ENST00000618166 COPS2P61201 443 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms