RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 ZAP70P43403 619 aa13.79□□□□□ -0.2
C11orf54-215ENST00000617482 IMMTQ16891 758 aaKnown RBP13.79□□□□□ -0.2
C11orf54-215ENST00000617482 ATL3Q6DD88 541 aa13.79□□□□□ -0.2
C11orf54-215ENST00000617482 DHX40Q8IX18 779 aaKnown RBP13.79□□□□□ -0.2
C11orf54-215ENST00000617482 SDF4Q9BRK5 362 aa13.79□□□□□ -0.2
C11orf54-215ENST00000617482 PUS7LQ9H0K6 701 aaKnown RBP13.79□□□□□ -0.2
C11orf54-215ENST00000617482 CLIC4Q9Y696 253 aa13.79□□□□□ -0.2
C11orf54-215ENST00000617482 TNS3Q68CZ2 1445 aa13.78□□□□□ -0.2
C11orf54-215ENST00000617482 PRC1O43663 620 aa13.78□□□□□ -0.2
C11orf54-215ENST00000617482 SYNE4Q8N205 404 aa13.78□□□□□ -0.2
C11orf54-215ENST00000617482 CTNNA3Q9UI47 895 aa13.78□□□□□ -0.2
C11orf54-215ENST00000617482 KLF18A0A0U1RQI7 1052 aa13.78□□□□□ -0.2
C11orf54-215ENST00000617482 TNNT1P13805 278 aa13.78□□□□□ -0.2
C11orf54-215ENST00000617482 SF3A1Q15459 793 aaKnown RBP13.78□□□□□ -0.2
C11orf54-215ENST00000617482 TPD52L1Q16890 204 aaPredicted RBP13.78□□□□□ -0.2
C11orf54-215ENST00000617482 SAMD1Q6SPF0 538 aaPredicted RBP13.78□□□□□ -0.2
C11orf54-215ENST00000617482 FILIP1Q7Z7B0 1213 aa13.78□□□□□ -0.2
C11orf54-215ENST00000617482 CADPS2Q86UW7 1296 aa13.78□□□□□ -0.2
C11orf54-215ENST00000617482 ANO10Q9NW15 660 aa13.78□□□□□ -0.2
C11orf54-215ENST00000617482 NDUFA8P51970 172 aa13.77□□□□□ -0.21
C11orf54-215ENST00000617482 TCIRG1Q13488 830 aa13.77□□□□□ -0.21
C11orf54-215ENST00000617482 SARM1Q6SZW1 724 aa13.77□□□□□ -0.21
C11orf54-215ENST00000617482 LRRC8AQ8IWT6 810 aa13.77□□□□□ -0.21
C11orf54-215ENST00000617482 FMR1NBQ8N0W7 255 aaPredicted RBP13.77□□□□□ -0.21
C11orf54-215ENST00000617482 MRPS27Q92552 414 aaKnown RBP13.77□□□□□ -0.21
C11orf54-215ENST00000617482 C8orf76Q96K31 380 aa13.77□□□□□ -0.21
C11orf54-215ENST00000617482 ISCA1Q9BUE6 129 aa13.77□□□□□ -0.21
C11orf54-215ENST00000617482 AKAP2Q9Y2D5 859 aa13.77□□□□□ -0.21
C11orf54-215ENST00000617482 LAMA4Q16363 1823 aa13.77□□□□□ -0.21
C11orf54-215ENST00000617482 GOLGA8BA8MQT2 603 aa13.76□□□□□ -0.21
C11orf54-215ENST00000617482 GLI3P10071 1580 aa13.76□□□□□ -0.21
C11orf54-215ENST00000617482 CDC25BP30305 580 aa13.76□□□□□ -0.21
C11orf54-215ENST00000617482 STK38Q15208 465 aa13.76□□□□□ -0.21
C11orf54-215ENST00000617482 PPP4R3BQ5MIZ7 849 aa13.76□□□□□ -0.21
C11orf54-215ENST00000617482 TICAM2Q86XR7 235 aa13.76□□□□□ -0.21
C11orf54-215ENST00000617482 AOPEPQ8N6M6 819 aa13.76□□□□□ -0.21
C11orf54-215ENST00000617482 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.76□□□□□ -0.21
C11orf54-215ENST00000617482 RTEL1Q9NZ71 1219 aa13.76□□□□□ -0.21
C11orf54-215ENST00000617482 ORC3Q9UBD5 711 aaPredicted RBP13.76□□□□□ -0.21
C11orf54-215ENST00000617482 WDR17Q8IZU2 1322 aa13.76□□□□□ -0.21
C11orf54-215ENST00000617482 EVCP57679 992 aa13.76□□□□□ -0.21
C11orf54-215ENST00000617482 LRRFIP1Q32MZ4 808 aaKnown RBP13.76□□□□□ -0.21
C11orf54-215ENST00000617482 ADALQ6DHV7 355 aa13.76□□□□□ -0.21
C11orf54-215ENST00000617482 LINC00301Q8NCQ3 95 aa13.76□□□□□ -0.21
C11orf54-215ENST00000617482 MRFAP1L1Q96HT8 127 aa13.76□□□□□ -0.21
C11orf54-215ENST00000617482 HPS5Q9UPZ3 1129 aa13.76□□□□□ -0.21
C11orf54-215ENST00000617482 ZNF213O14771 459 aa13.75□□□□□ -0.21
C11orf54-215ENST00000617482 CPLX1O14810 134 aa13.75□□□□□ -0.21
C11orf54-215ENST00000617482 IFIT5Q13325 482 aaKnown RBP13.75□□□□□ -0.21
C11orf54-215ENST00000617482 ZNF592Q92610 1267 aa13.75□□□□□ -0.21
C11orf54-215ENST00000617482 PRDM10Q9NQV6 1147 aa13.75□□□□□ -0.21
C11orf54-215ENST00000617482 STRN4Q9NRL3 753 aa13.75□□□□□ -0.21
C11orf54-215ENST00000617482 CPDO75976 1380 aa13.75□□□□□ -0.21
C11orf54-215ENST00000617482 USP27XA6NNY8 438 aa13.75□□□□□ -0.21
C11orf54-215ENST00000617482 GPAA1O43292 621 aa13.75□□□□□ -0.21
C11orf54-215ENST00000617482 ZFYP08048 801 aaPredicted RBP13.75□□□□□ -0.21
C11orf54-215ENST00000617482 ANTXR2P58335 489 aa13.75□□□□□ -0.21
C11orf54-215ENST00000617482 RALYLQ86SE5 291 aaKnown RBP13.75□□□□□ -0.21
C11orf54-215ENST00000617482 MB21D2Q8IYB1 491 aaPredicted RBP13.75□□□□□ -0.21
C11orf54-215ENST00000617482 CEP57L1Q8IYX8 460 aa13.75□□□□□ -0.21
C11orf54-215ENST00000617482 FBXL16Q8N461 479 aa13.75□□□□□ -0.21
C11orf54-215ENST00000617482 FBXO18Q8NFZ0 1043 aa13.75□□□□□ -0.21
C11orf54-215ENST00000617482 NCOA7Q8NI08 942 aa13.75□□□□□ -0.21
C11orf54-215ENST00000617482 APPBP2Q92624 585 aa13.75□□□□□ -0.21
C11orf54-215ENST00000617482 CHMP4CQ96CF2 233 aa13.75□□□□□ -0.21
C11orf54-215ENST00000617482 DENND2AQ9ULE3 1009 aa13.75□□□□□ -0.21
C11orf54-215ENST00000617482 CTIFO43310 598 aaKnown RBP13.74□□□□□ -0.21
C11orf54-215ENST00000617482 DHX16O60231 1041 aaKnown RBP13.74□□□□□ -0.21
C11orf54-215ENST00000617482 SKILP12757 684 aa13.74□□□□□ -0.21
C11orf54-215ENST00000617482 IL2RBP14784 551 aa13.74□□□□□ -0.21
C11orf54-215ENST00000617482 CBX1P83916 185 aa13.74□□□□□ -0.21
C11orf54-215ENST00000617482 PDCL2Q8N4E4 241 aa13.74□□□□□ -0.21
C11orf54-215ENST00000617482 ABCC6O95255 1503 aa13.74□□□□□ -0.21
C11orf54-215ENST00000617482 BIN1O00499 593 aa13.74□□□□□ -0.21
C11orf54-215ENST00000617482 GPTP24298 496 aa13.74□□□□□ -0.21
C11orf54-215ENST00000617482 METTL24Q5JXM2 366 aa13.74□□□□□ -0.21
C11orf54-215ENST00000617482 PKD1L3Q7Z443 1732 aa13.74□□□□□ -0.21
C11orf54-215ENST00000617482 PLEKHG2Q9H7P9 1386 aa13.73□□□□□ -0.21
C11orf54-215ENST00000617482 KIF28PB7ZC32 967 aa13.73□□□□□ -0.21
C11orf54-215ENST00000617482 SPTLC2O15270 562 aa13.73□□□□□ -0.21
C11orf54-215ENST00000617482 NKX1-1Q15270 411 aaPredicted RBP13.73□□□□□ -0.21
C11orf54-215ENST00000617482 ZRSR1Q15695 479 aaKnown RBP13.73□□□□□ -0.21
C11orf54-215ENST00000617482 DPCR1Q3MIW9 517 aa13.73□□□□□ -0.21
C11orf54-215ENST00000617482 SYNE3Q6ZMZ3 975 aa13.73□□□□□ -0.21
C11orf54-215ENST00000617482 BRINP3Q76B58 766 aa13.73□□□□□ -0.21
C11orf54-215ENST00000617482 NKX2-3Q8TAU0 364 aa13.73□□□□□ -0.21
C11orf54-215ENST00000617482 NAT10Q9H0A0 1025 aaKnown RBP13.73□□□□□ -0.21
C11orf54-215ENST00000617482 CCDC69A6NI79 296 aa13.73□□□□□ -0.21
C11orf54-215ENST00000617482 RXRAP19793 462 aa13.73□□□□□ -0.21
C11orf54-215ENST00000617482 MCAMP43121 646 aa13.73□□□□□ -0.21
C11orf54-215ENST00000617482 NAA30Q147X3 362 aaPredicted RBP13.73□□□□□ -0.21
C11orf54-215ENST00000617482 ATP2B3Q16720 1220 aa13.73□□□□□ -0.21
C11orf54-215ENST00000617482 MYSM1Q5VVJ2 828 aa13.73□□□□□ -0.21
C11orf54-215ENST00000617482 LDHAL6AQ6ZMR3 332 aa13.73□□□□□ -0.21
C11orf54-215ENST00000617482 DNAJC10Q8IXB1 793 aa13.73□□□□□ -0.21
C11orf54-215ENST00000617482 KCNG4Q8TDN1 519 aa13.73□□□□□ -0.21
C11orf54-215ENST00000617482 TRMT1Q9NXH9 659 aaKnown RBP13.73□□□□□ -0.21
C11orf54-215ENST00000617482 KIAA1468Q9P260 1216 aa13.73□□□□□ -0.21
C11orf54-215ENST00000617482 ASAP1Q9ULH1 1129 aa13.73□□□□□ -0.21
C11orf54-215ENST00000617482 KCPQ6ZWJ8 1503 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 342.9 ms