RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 TDRD7Q8NHU6 1098 aaKnown RBP12.14□□□□□ -0.47
TARDBP-218ENST00000617172 FAM205AQ6ZU69 1335 aa12.13□□□□□ -0.47
TARDBP-218ENST00000617172 CAPN15O75808 1086 aa12.13□□□□□ -0.47
TARDBP-218ENST00000617172 SLC10A3P09131 477 aa12.13□□□□□ -0.47
TARDBP-218ENST00000617172 KIF23Q02241 960 aaPredicted RBP12.13□□□□□ -0.47
TARDBP-218ENST00000617172 CAVIN4Q5BKX8 364 aa12.13□□□□□ -0.47
TARDBP-218ENST00000617172 CERS5Q8N5B7 392 aa12.13□□□□□ -0.47
TARDBP-218ENST00000617172 ANKRD44Q8N8A2 993 aa12.13□□□□□ -0.47
TARDBP-218ENST00000617172 FAM84BQ96KN1 310 aaPredicted RBP12.13□□□□□ -0.47
TARDBP-218ENST00000617172 PUS3Q9BZE2 481 aaKnown RBP12.13□□□□□ -0.47
TARDBP-218ENST00000617172 API5Q9BZZ5 524 aaKnown RBP12.13□□□□□ -0.47
TARDBP-218ENST00000617172 SAGE1Q9NXZ1 904 aa12.13□□□□□ -0.47
TARDBP-218ENST00000617172 THSD7BQ9C0I4 1608 aa12.12□□□□□ -0.47
TARDBP-218ENST00000617172 PDE8BO95263 885 aa12.12□□□□□ -0.47
TARDBP-218ENST00000617172 GYG1P46976 350 aa12.12□□□□□ -0.47
TARDBP-218ENST00000617172 TTLL12Q14166 644 aaPredicted RBP12.12□□□□□ -0.47
TARDBP-218ENST00000617172 METTL24Q5JXM2 366 aa12.12□□□□□ -0.47
TARDBP-218ENST00000617172 ARMC9Q7Z3E5 817 aa12.12□□□□□ -0.47
TARDBP-218ENST00000617172 FBXO33Q7Z6M2 555 aa12.12□□□□□ -0.47
TARDBP-218ENST00000617172 ARHGAP45Q92619 1136 aa12.12□□□□□ -0.47
TARDBP-218ENST00000617172 ZIC5Q96T25 663 aa12.12□□□□□ -0.47
TARDBP-218ENST00000617172 DEFB129Q9H1M3 183 aa12.12□□□□□ -0.47
TARDBP-218ENST00000617172 FBXO3Q9UK99 471 aa12.12□□□□□ -0.47
TARDBP-218ENST00000617172 NOB1Q9ULX3 412 aaKnown RBP12.12□□□□□ -0.47
TARDBP-218ENST00000617172 PPP2R3BQ9Y5P8 575 aa12.12□□□□□ -0.47
TARDBP-218ENST00000617172 PSME4Q14997 1843 aa12.11□□□□□ -0.47
TARDBP-218ENST00000617172 SPDYE2BA6NHP3 402 aa12.11□□□□□ -0.47
TARDBP-218ENST00000617172 FRAT2O75474 233 aaPredicted RBP12.11□□□□□ -0.47
TARDBP-218ENST00000617172 UBTFL1P0CB47 393 aaPredicted RBP12.11□□□□□ -0.47
TARDBP-218ENST00000617172 SPDYE6P0CI01 402 aa12.11□□□□□ -0.47
TARDBP-218ENST00000617172 CFAP100Q494V2 611 aa12.11□□□□□ -0.47
TARDBP-218ENST00000617172 LRRC24Q50LG9 513 aa12.11□□□□□ -0.47
TARDBP-218ENST00000617172 MFSD14BQ5SR56 506 aa12.11□□□□□ -0.47
TARDBP-218ENST00000617172 PRAMEF18Q5VWM3 479 aa12.11□□□□□ -0.47
TARDBP-218ENST00000617172 CSRNP1Q96S65 589 aa12.11□□□□□ -0.47
TARDBP-218ENST00000617172 SERPINA10Q9UK55 444 aa12.11□□□□□ -0.47
TARDBP-218ENST00000617172 F8W031 263 aaPredicted RBP12.1□□□□□ -0.47
TARDBP-218ENST00000617172 UBE2Q2LH0YL09 131 aa12.1□□□□□ -0.47
TARDBP-218ENST00000617172 PPP1R12BO60237 982 aaPredicted RBP12.1□□□□□ -0.47
TARDBP-218ENST00000617172 IFIT1P09914 478 aaKnown RBP12.1□□□□□ -0.47
TARDBP-218ENST00000617172 RBM5P52756 815 aaKnown RBP eCLIP12.1□□□□□ -0.47
TARDBP-218ENST00000617172 RARSP54136 660 aaKnown RBP12.1□□□□□ -0.47
TARDBP-218ENST00000617172 PUM3Q15397 648 aaKnown RBP12.1□□□□□ -0.47
TARDBP-218ENST00000617172 SUPT20HL1Q3ZLR7 823 aa12.1□□□□□ -0.47
TARDBP-218ENST00000617172 RASAL3Q86YV0 1011 aa12.1□□□□□ -0.47
TARDBP-218ENST00000617172 VGLL2Q8N8G2 317 aa12.1□□□□□ -0.47
TARDBP-218ENST00000617172 TBC1D22AQ8WUA7 517 aa12.1□□□□□ -0.47
TARDBP-218ENST00000617172 PRMT6Q96LA8 375 aaPredicted RBP12.1□□□□□ -0.47
TARDBP-218ENST00000617172 TSKSQ9UJT2 592 aa12.1□□□□□ -0.47
TARDBP-218ENST00000617172 SCAF8Q9UPN6 1271 aaKnown RBP12.1□□□□□ -0.47
TARDBP-218ENST00000617172 KIF16BQ96L93 1317 aa12.1□□□□□ -0.47
TARDBP-218ENST00000617172 SPEF2Q9C093 1822 aa12.09□□□□□ -0.47
TARDBP-218ENST00000617172 POLR2AP24928 1970 aaKnown RBP12.09□□□□□ -0.47
TARDBP-218ENST00000617172 UNCXA6NJT0 531 aa12.09□□□□□ -0.47
TARDBP-218ENST00000617172 EYA2O00167 538 aa12.09□□□□□ -0.47
TARDBP-218ENST00000617172 IPO8O15397 1037 aaKnown RBP12.09□□□□□ -0.47
TARDBP-218ENST00000617172 HDLBPQ00341 1268 aaKnown RBP12.09□□□□□ -0.47
TARDBP-218ENST00000617172 TNFAIP1Q13829 316 aa12.09□□□□□ -0.47
TARDBP-218ENST00000617172 MRIQ9BWK5 157 aa12.09□□□□□ -0.47
TARDBP-218ENST00000617172 RNF186Q9NXI6 227 aa12.09□□□□□ -0.47
TARDBP-218ENST00000617172 TTF2Q9UNY4 1162 aaKnown RBP12.09□□□□□ -0.47
TARDBP-218ENST00000617172 COL1A1P02452 1464 aaPredicted RBP12.08□□□□□ -0.47
TARDBP-218ENST00000617172 TRPA1O75762 1119 aa12.08□□□□□ -0.48
TARDBP-218ENST00000617172 RFX5P48382 616 aaPredicted RBP12.08□□□□□ -0.48
TARDBP-218ENST00000617172 PTPN12Q05209 780 aaKnown RBP12.08□□□□□ -0.48
TARDBP-218ENST00000617172 LDLRAD1Q5T700 205 aa12.08□□□□□ -0.48
TARDBP-218ENST00000617172 MOB2Q70IA6 237 aa12.08□□□□□ -0.48
TARDBP-218ENST00000617172 LPIN2Q92539 896 aa12.08□□□□□ -0.48
TARDBP-218ENST00000617172 ABHD8Q96I13 439 aa12.08□□□□□ -0.48
TARDBP-218ENST00000617172 JAG2Q9Y219 1238 aa12.08□□□□□ -0.48
TARDBP-218ENST00000617172 SUGT1Q9Y2Z0 365 aa12.08□□□□□ -0.48
TARDBP-218ENST00000617172 CIAO1O76071 339 aa12.07□□□□□ -0.48
TARDBP-218ENST00000617172 GNAI3P08754 354 aa12.07□□□□□ -0.48
TARDBP-218ENST00000617172 SLC5A1P13866 664 aa12.07□□□□□ -0.48
TARDBP-218ENST00000617172 FGFR2P21802 821 aa12.07□□□□□ -0.48
TARDBP-218ENST00000617172 TM4SF4P48230 202 aa12.07□□□□□ -0.48
TARDBP-218ENST00000617172 BCAMP50895 628 aa12.07□□□□□ -0.48
TARDBP-218ENST00000617172 MAP3K11Q16584 847 aa12.07□□□□□ -0.48
TARDBP-218ENST00000617172 INTS3Q68E01 1043 aaKnown RBP12.07□□□□□ -0.48
TARDBP-218ENST00000617172 DZIP1LQ8IYY4 767 aaKnown RBP12.07□□□□□ -0.48
TARDBP-218ENST00000617172 KLHDC4Q8TBB5 520 aa12.07□□□□□ -0.48
TARDBP-218ENST00000617172 SLC10A4Q96EP9 437 aa12.07□□□□□ -0.48
TARDBP-218ENST00000617172 VEZTQ9HBM0 779 aa12.07□□□□□ -0.48
TARDBP-218ENST00000617172 CEP126Q9P2H0 1117 aa12.07□□□□□ -0.48
TARDBP-218ENST00000617172 ANGEL1Q9UNK9 670 aaKnown RBP12.07□□□□□ -0.48
TARDBP-218ENST00000617172 PAPPA2Q9BXP8 1791 aa12.07□□□□□ -0.48
TARDBP-218ENST00000617172 CLRN2A0PK11 232 aa12.06□□□□□ -0.48
TARDBP-218ENST00000617172 CRKP46108 304 aa12.06□□□□□ -0.48
TARDBP-218ENST00000617172 INHBEP58166 350 aa12.06□□□□□ -0.48
TARDBP-218ENST00000617172 SREBF2Q12772 1141 aa12.06□□□□□ -0.48
TARDBP-218ENST00000617172 RASA3Q14644 834 aa12.06□□□□□ -0.48
TARDBP-218ENST00000617172 SPDYE2Q495Y8 402 aa12.06□□□□□ -0.48
TARDBP-218ENST00000617172 GNL3LQ9NVN8 582 aaKnown RBP12.06□□□□□ -0.48
TARDBP-218ENST00000617172 ZNF70Q9UC06 446 aaPredicted RBP12.06□□□□□ -0.48
TARDBP-218ENST00000617172 MAST3O60307 1309 aa12.06□□□□□ -0.48
TARDBP-218ENST00000617172 IL15P40933 162 aaPredicted RBP12.05□□□□□ -0.48
TARDBP-218ENST00000617172 IREB2P48200 963 aaKnown RBP12.05□□□□□ -0.48
TARDBP-218ENST00000617172 TNNI2P48788 182 aa12.05□□□□□ -0.48
TARDBP-218ENST00000617172 CHAF1AQ13111 956 aaPredicted RBP12.05□□□□□ -0.48
TARDBP-218ENST00000617172 PRKG1Q13976 671 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms