RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 BLMP54132 1417 aaPredicted RBP5.17□□□□□ -1.58
CHD9-221ENST00000615216 EDC4Q6P2E9 1401 aaKnown RBP5.17□□□□□ -1.58
CHD9-221ENST00000615216 NPC1L1Q9UHC9 1359 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 LIG1P18858 919 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 BRF1Q92994 677 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 LLPHQ9BRT6 129 aaKnown RBP5.17□□□□□ -1.58
CHD9-221ENST00000615216 PRDM10Q9NQV6 1147 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 ZKSCAN5Q9Y2L8 839 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 YTHDC2Q9H6S0 1430 aaKnown RBP5.17□□□□□ -1.58
CHD9-221ENST00000615216 NMIQ13287 307 aaPredicted RBP5.17□□□□□ -1.58
CHD9-221ENST00000615216 KIAA1524Q8TCG1 905 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 CEP83Q9Y592 693 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 NDC80O14777 642 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 ALDH3A1P30838 453 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 VWA3BQ502W6 1294 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 CCDC121Q6ZUS5 278 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 ZMYM3Q14202 1370 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 KIF24Q5T7B8 1368 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 NPHP3Q7Z494 1330 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 FAM13AO94988 1023 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 AFMP43652 599 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 TNNC1P63316 161 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 UBXN1Q04323 297 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 SETDB2Q96T68 719 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 SWAP70Q9UH65 585 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 SPDYE3A6NKU9 549 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 A6NNZ2 444 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 TUBB8Q3ZCM7 444 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 HDXQ7Z353 690 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 MTRF1LQ9UGC7 380 aaKnown RBP5.16□□□□□ -1.58
CHD9-221ENST00000615216 PCDH11XQ9BZA7 1347 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 PCDH11YQ9BZA8 1340 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 GLT8D2Q9H1C3 349 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 NCBP1Q09161 790 aaKnown RBP5.16□□□□□ -1.58
CHD9-221ENST00000615216 XAGE3Q8WTP9 111 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 CCDC94Q9BW85 323 aaPredicted RBP5.16□□□□□ -1.58
CHD9-221ENST00000615216 ATP5J2-PTCD1G3V325 749 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 PHACTR2O75167 634 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 CREB3L3Q68CJ9 461 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 ZCRB1Q8TBF4 217 aaKnown RBP5.16□□□□□ -1.58
CHD9-221ENST00000615216 VAT1LQ9HCJ6 419 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 ZNF608Q9ULD9 1512 aaPredicted RBP5.16□□□□□ -1.58
CHD9-221ENST00000615216 TMEM87AQ8NBN3 555 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 SMARCC2Q8TAQ2 1214 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 TSHZ3Q63HK5 1081 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 NBPF11Q86T75 865 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 DNAI1Q9UI46 699 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 MRVI1Q9Y6F6 885 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 FAM83GA6ND36 823 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 RPL13P26373 211 aaKnown RBP5.16□□□□□ -1.58
CHD9-221ENST00000615216 CEP85Q6P2H3 762 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 GSTA5Q7RTV2 222 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 ANAPC4Q9UJX5 808 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 DHX32Q7L7V1 743 aaKnown RBP5.16□□□□□ -1.58
CHD9-221ENST00000615216 SMC6Q96SB8 1091 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 MEIS3Q99687 375 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 DCTPP1Q9H773 170 aa5.16□□□□□ -1.58
CHD9-221ENST00000615216 C8orf34Q49A92 452 aa5.15□□□□□ -1.58
CHD9-221ENST00000615216 KRT79Q5XKE5 535 aa5.15□□□□□ -1.58
CHD9-221ENST00000615216 ARFGAP2Q8N6H7 521 aa5.15□□□□□ -1.58
CHD9-221ENST00000615216 KIFAP3Q92845 792 aa5.15□□□□□ -1.58
CHD9-221ENST00000615216 CCDC42Q96M95 316 aa5.15□□□□□ -1.58
CHD9-221ENST00000615216 CSRNP2Q9H175 543 aa5.15□□□□□ -1.58
CHD9-221ENST00000615216 STX8Q9UNK0 236 aa5.15□□□□□ -1.58
CHD9-221ENST00000615216 TSPOAP1O95153 1857 aa5.15□□□□□ -1.58
CHD9-221ENST00000615216 DNM1Q05193 864 aaKnown RBP5.15□□□□□ -1.58
CHD9-221ENST00000615216 SEL1L2Q5TEA6 688 aa5.15□□□□□ -1.58
CHD9-221ENST00000615216 NECAB1Q8N987 351 aa5.15□□□□□ -1.58
CHD9-221ENST00000615216 IQCDQ96DY2 449 aa5.15□□□□□ -1.58
CHD9-221ENST00000615216 FRMD4BQ9Y2L6 1034 aa5.15□□□□□ -1.58
CHD9-221ENST00000615216 ARHGEF10O15013 1369 aa5.15□□□□□ -1.58
CHD9-221ENST00000615216 IQUBQ8NA54 791 aa5.15□□□□□ -1.58
CHD9-221ENST00000615216 LINS1Q8NG48 757 aa5.15□□□□□ -1.58
CHD9-221ENST00000615216 FBF1Q8TES7 1133 aa5.15□□□□□ -1.58
CHD9-221ENST00000615216 DNAJC25Q9H1X3 360 aa5.15□□□□□ -1.58
CHD9-221ENST00000615216 SNRKQ9NRH2 765 aa5.15□□□□□ -1.58
CHD9-221ENST00000615216 MTUS1Q9ULD2 1270 aa5.15□□□□□ -1.58
CHD9-221ENST00000615216 FOXO3O43524 673 aa5.15□□□□□ -1.58
CHD9-221ENST00000615216 PLCD1P51178 756 aa5.15□□□□□ -1.58
CHD9-221ENST00000615216 MNAT1P51948 309 aa5.15□□□□□ -1.58
CHD9-221ENST00000615216 DACT1Q9NYF0 836 aa5.15□□□□□ -1.58
CHD9-221ENST00000615216 POLR1AO95602 1720 aaPredicted RBP5.15□□□□□ -1.59
CHD9-221ENST00000615216 CNNM4Q6P4Q7 775 aa5.15□□□□□ -1.59
CHD9-221ENST00000615216 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.15□□□□□ -1.59
CHD9-221ENST00000615216 CROCC2H7BZ55 1655 aa5.15□□□□□ -1.59
CHD9-221ENST00000615216 SPDYE4A6NLX3 237 aa5.15□□□□□ -1.59
CHD9-221ENST00000615216 MRPS9P82933 396 aaKnown RBP5.15□□□□□ -1.59
CHD9-221ENST00000615216 MXRA7P84157 204 aa5.15□□□□□ -1.59
CHD9-221ENST00000615216 FAM160A1Q05DH4 1040 aa5.15□□□□□ -1.59
CHD9-221ENST00000615216 CCDC6Q16204 474 aa5.15□□□□□ -1.59
CHD9-221ENST00000615216 DTHD1Q6ZMT9 781 aa5.15□□□□□ -1.59
CHD9-221ENST00000615216 HS2ST1Q7LGA3 356 aa5.15□□□□□ -1.59
CHD9-221ENST00000615216 CCDC26Q8TAB7 109 aa5.15□□□□□ -1.59
CHD9-221ENST00000615216 FAM76AQ8TAV0 307 aa5.15□□□□□ -1.59
CHD9-221ENST00000615216 LARP6Q9BRS8 491 aaKnown RBP5.15□□□□□ -1.59
CHD9-221ENST00000615216 DDX23Q9BUQ8 820 aaKnown RBP5.15□□□□□ -1.59
CHD9-221ENST00000615216 AKR1B15C9JRZ8 316 aaPredicted RBP5.15□□□□□ -1.59
CHD9-221ENST00000615216 GAS8O95995 478 aa5.15□□□□□ -1.59
CHD9-221ENST00000615216 EPB41P11171 864 aaKnown RBP5.15□□□□□ -1.59
CHD9-221ENST00000615216 ATP6V1AP38606 617 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms