RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 C4AP0C0L4 1744 aa12.76□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 C4BP0C0L5 1744 aa12.76□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 A0A087WWV3 80 aa12.75□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 GOLGA6L4A6NEF3 574 aa12.75□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 TIMM10P62072 90 aa12.75□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 IFIT5Q13325 482 aaKnown RBP12.75□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 STOX1Q6ZVD7 989 aa12.75□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 XAGE2Q96GT9 111 aa12.75□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 STRN4Q9NRL3 753 aa12.75□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 TFIP11Q9UBB9 837 aaKnown RBP12.75□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 ARID4AP29374 1257 aaPredicted RBP12.75□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 CTSWP56202 376 aa12.75□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 KRT85P78386 507 aa12.75□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 HMGN5P82970 282 aaKnown RBP12.75□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 DNAJC2Q99543 621 aaKnown RBP12.75□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 DDX46Q7L014 1031 aaKnown RBP12.75□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 TRIM5Q9C035 493 aa12.75□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 CARMIL3Q8ND23 1372 aa12.75□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 GOLIM4O00461 696 aa12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 PDE8AO60658 829 aa12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 FGD1P98174 961 aa12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 DNM1Q05193 864 aaKnown RBP12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 COL9A3Q14050 684 aaPredicted RBP12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 TTF1Q15361 905 aaPredicted RBP12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 BARGINQ6ZT62 677 aa12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 Q6ZUG5 572 aa12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 LUZP1Q86V48 1076 aa12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 PUS3Q9BZE2 481 aaKnown RBP12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 NRBP1Q9UHY1 535 aa12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 CCDC9Q9Y3X0 531 aaKnown RBP12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 EXOC5O00471 708 aa12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 FOXP2O15409 715 aa12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 ZSCAN25Q6NSZ9 544 aa12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 NECAB1Q8N987 351 aa12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 APPBP2Q92624 585 aa12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 NAP1L2Q9ULW6 460 aaPredicted RBP12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 SPATA31A1Q5TZJ5 1347 aa12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 FGFR2P21802 821 aa12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 TERF1P54274 439 aa12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 EIF5P55010 431 aaKnown RBP12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 RESTQ13127 1097 aa12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 STK3Q13188 491 aa12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 CCDC186Q7Z3E2 898 aa12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 PIBF1Q8WXW3 757 aa12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 SEC62Q99442 399 aaKnown RBP12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 MROH5Q6ZUA9 1318 aa12.74□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 CASZ1Q86V15 1759 aa12.73□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 E7EWF7 191 aa12.73□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 GORABQ5T7V8 394 aa12.73□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 ZNF594Q96JF6 807 aaPredicted RBP12.73□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 UBE3CQ15386 1083 aa12.73□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 TPD52L1Q16890 204 aaPredicted RBP12.73□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 NEUROD6Q96NK8 337 aa12.73□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 ALX1Q15699 326 aa12.72□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 SCN7AQ01118 1682 aa12.72□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 ANKRD18BA2A2Z9 1011 aa12.72□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 PDE4CQ08493 712 aa12.72□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 HLFQ16534 295 aa12.72□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 CCDC129Q6ZRS4 1044 aa12.72□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 NID2Q14112 1375 aa12.72□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 M0R2C6 588 aa12.72□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 HSP90B1P14625 803 aaKnown RBP12.72□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 SCRN1Q12765 414 aa12.72□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 TTC39AQ5SRH9 613 aa12.72□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 CDC37L1Q7L3B6 337 aa12.72□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 NSUN7Q8NE18 718 aaKnown RBP12.72□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 OSBP2Q969R2 916 aa12.72□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 UQCRFS1P1P0C7P4 283 aa12.71□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 FILIP1Q7Z7B0 1213 aa12.71□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 BCL9LQ86UU0 1499 aa12.71□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 COL24A1Q17RW2 1714 aa12.71□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 PDE8BO95263 885 aa12.71□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 ST7Q9NRC1 585 aa12.71□□□□□ -0.37
SENP3-EIF4A1-201ENST00000614237 AP5Z1O43299 807 aa12.71□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 ITGA6P23229 1130 aa12.71□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 PARP10Q53GL7 1025 aa12.71□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 INTS5Q6P9B9 1019 aaKnown RBP12.71□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 TTC6Q86TZ1 520 aa12.71□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 CERS3Q8IU89 383 aa12.71□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.71□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 CTDNEP1O95476 244 aa12.7□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 ADD1P35611 737 aaKnown RBP12.7□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 ADD2P35612 726 aa12.7□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 FAM89AQ96GI7 184 aa12.7□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 CAVIN2O95810 425 aa12.7□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 TNNT1P13805 278 aa12.7□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 MB21D2Q8IYB1 491 aaPredicted RBP12.7□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 ERCC4Q92889 916 aaPredicted RBP12.7□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 MTA3Q9BTC8 594 aa12.7□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 DDX19AQ9NUU7 478 aaKnown RBP12.7□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 CFAP45Q9UL16 551 aa12.7□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 IRS4O14654 1257 aaPredicted RBP12.7□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 RCOR1Q9UKL0 485 aa12.7□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 KIAA1551Q9HCM1 1747 aa12.69□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 SPATA31A5Q5VU36 1347 aa12.69□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 UBN2Q6ZU65 1347 aa12.69□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 SPATA31A7Q8IWB4 1347 aa12.69□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 PDIA3P30101 505 aaKnown RBP12.69□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 ADORA1P30542 326 aa12.69□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 LEO1Q8WVC0 666 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms