RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 PRIMPOLQ96LW4 560 aa11.83□□□□□ -0.51
GGA3-221ENST00000614198 LAMB2P55268 1798 aa11.83□□□□□ -0.52
GGA3-221ENST00000614198 GTF2F1P35269 517 aaKnown RBP eCLIP11.83□□□□□ -0.52
GGA3-221ENST00000614198 CCDC102BQ68D86 513 aa11.83□□□□□ -0.52
GGA3-221ENST00000614198 ZNF710Q8N1W2 664 aa11.83□□□□□ -0.52
GGA3-221ENST00000614198 ZNF831Q5JPB2 1677 aa11.83□□□□□ -0.52
GGA3-221ENST00000614198 SERPINB2P05120 415 aa11.83□□□□□ -0.52
GGA3-221ENST00000614198 CNBD1Q8NA66 436 aa11.83□□□□□ -0.52
GGA3-221ENST00000614198 NLRP3Q96P20 1036 aa11.83□□□□□ -0.52
GGA3-221ENST00000614198 RBM27Q9P2N5 1060 aaKnown RBP11.83□□□□□ -0.52
GGA3-221ENST00000614198 IGHMBP2P38935 993 aaKnown RBP11.82□□□□□ -0.52
GGA3-221ENST00000614198 SLC27A3Q5K4L6 730 aa11.82□□□□□ -0.52
GGA3-221ENST00000614198 PRPF40BQ6NWY9 871 aaKnown RBP11.82□□□□□ -0.52
GGA3-221ENST00000614198 AKT1S1Q96B36 256 aa11.82□□□□□ -0.52
GGA3-221ENST00000614198 MINPP1Q9UNW1 487 aa11.82□□□□□ -0.52
GGA3-221ENST00000614198 ZBTB22O15209 634 aa11.82□□□□□ -0.52
GGA3-221ENST00000614198 IGSF3O75054 1194 aa11.82□□□□□ -0.52
GGA3-221ENST00000614198 CYP2E1P05181 493 aaPredicted RBP11.82□□□□□ -0.52
GGA3-221ENST00000614198 CDK11BP21127 795 aaKnown RBP11.82□□□□□ -0.52
GGA3-221ENST00000614198 NUCB2P80303 420 aa11.82□□□□□ -0.52
GGA3-221ENST00000614198 HMGN5P82970 282 aaKnown RBP11.82□□□□□ -0.52
GGA3-221ENST00000614198 CBX1P83916 185 aa11.82□□□□□ -0.52
GGA3-221ENST00000614198 KIAA2012Q0VF49 1180 aa11.82□□□□□ -0.52
GGA3-221ENST00000614198 REC8O95072 547 aa11.82□□□□□ -0.52
GGA3-221ENST00000614198 ANKRD18AQ8IVF6 992 aa11.82□□□□□ -0.52
GGA3-221ENST00000614198 PIH1D3Q9NQM4 214 aaKnown RBP11.82□□□□□ -0.52
GGA3-221ENST00000614198 TAF3Q5VWG9 929 aa11.81□□□□□ -0.52
GGA3-221ENST00000614198 PNPLA7Q6ZV29 1317 aa11.81□□□□□ -0.52
GGA3-221ENST00000614198 NEK4P51957 841 aa11.81□□□□□ -0.52
GGA3-221ENST00000614198 RASGRF1Q13972 1273 aa11.81□□□□□ -0.52
GGA3-221ENST00000614198 CCDC158Q5M9N0 1113 aa11.81□□□□□ -0.52
GGA3-221ENST00000614198 ZNF219Q9P2Y4 722 aaPredicted RBP11.81□□□□□ -0.52
GGA3-221ENST00000614198 M0R2C6 588 aa11.8□□□□□ -0.52
GGA3-221ENST00000614198 POLRMTO00411 1230 aaKnown RBP11.8□□□□□ -0.52
GGA3-221ENST00000614198 PLSCR1O15162 318 aa11.8□□□□□ -0.52
GGA3-221ENST00000614198 FGFR2P21802 821 aa11.8□□□□□ -0.52
GGA3-221ENST00000614198 LRSAM1Q6UWE0 723 aa11.8□□□□□ -0.52
GGA3-221ENST00000614198 IDH1O75874 414 aaKnown RBP11.8□□□□□ -0.52
GGA3-221ENST00000614198 SF3B3Q15393 1217 aaKnown RBP11.8□□□□□ -0.52
GGA3-221ENST00000614198 OSBP2Q969R2 916 aa11.8□□□□□ -0.52
GGA3-221ENST00000614198 PUS7LQ9H0K6 701 aaKnown RBP11.8□□□□□ -0.52
GGA3-221ENST00000614198 TMEM51Q9NW97 253 aa11.8□□□□□ -0.52
GGA3-221ENST00000614198 RPS8P62241 208 aaKnown RBP11.8□□□□□ -0.52
GGA3-221ENST00000614198 PUM3Q15397 648 aaKnown RBP11.8□□□□□ -0.52
GGA3-221ENST00000614198 ZNF830Q96NB3 372 aaPredicted RBP11.8□□□□□ -0.52
GGA3-221ENST00000614198 HMG20BQ9P0W2 317 aa11.8□□□□□ -0.52
GGA3-221ENST00000614198 AKAP2Q9Y2D5 859 aa11.8□□□□□ -0.52
GGA3-221ENST00000614198 MMP10P09238 476 aa11.79□□□□□ -0.52
GGA3-221ENST00000614198 TTLL5Q6EMB2 1281 aa11.79□□□□□ -0.52
GGA3-221ENST00000614198 KBTBD3Q8NAB2 608 aa11.79□□□□□ -0.52
GGA3-221ENST00000614198 SNX14Q9Y5W7 946 aa11.79□□□□□ -0.52
GGA3-221ENST00000614198 AKAP11Q9UKA4 1901 aa11.79□□□□□ -0.52
GGA3-221ENST00000614198 SYCE3A1L190 88 aa11.79□□□□□ -0.52
GGA3-221ENST00000614198 WASHC4Q2M389 1173 aa11.79□□□□□ -0.52
GGA3-221ENST00000614198 SLC10A5Q5PT55 438 aa11.79□□□□□ -0.52
GGA3-221ENST00000614198 TSC1Q92574 1164 aa11.79□□□□□ -0.52
GGA3-221ENST00000614198 CHAMP1Q96JM3 812 aa11.79□□□□□ -0.52
GGA3-221ENST00000614198 GPR108Q9NPR9 543 aa11.79□□□□□ -0.52
GGA3-221ENST00000614198 STK11IPQ8N1F8 1099 aa11.79□□□□□ -0.52
GGA3-221ENST00000614198 CAMKK2Q96RR4 588 aa11.79□□□□□ -0.52
GGA3-221ENST00000614198 RBM8AQ9Y5S9 174 aaKnown RBP11.79□□□□□ -0.52
GGA3-221ENST00000614198 KCNJ4P48050 445 aa11.78□□□□□ -0.52
GGA3-221ENST00000614198 GPT2Q8TD30 523 aa11.78□□□□□ -0.52
GGA3-221ENST00000614198 IPO4Q8TEX9 1081 aaKnown RBP11.78□□□□□ -0.52
GGA3-221ENST00000614198 LPIN2Q92539 896 aa11.78□□□□□ -0.52
GGA3-221ENST00000614198 NYXQ9GZU5 481 aa11.78□□□□□ -0.52
GGA3-221ENST00000614198 MROH5Q6ZUA9 1318 aa11.78□□□□□ -0.52
GGA3-221ENST00000614198 NKX2-3Q8TAU0 364 aa11.78□□□□□ -0.52
GGA3-221ENST00000614198 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.78□□□□□ -0.522e-10■■■□□ 18.4
GGA3-221ENST00000614198 RAD50Q92878 1312 aa11.78□□□□□ -0.52
GGA3-221ENST00000614198 TNS1Q9HBL0 1735 aaKnown RBP11.78□□□□□ -0.52
GGA3-221ENST00000614198 SMIM22K7EJ46 135 aa11.77□□□□□ -0.52
GGA3-221ENST00000614198 HSPA4P34932 840 aa11.77□□□□□ -0.52
GGA3-221ENST00000614198 ZGPATQ8N5A5 531 aaKnown RBP11.77□□□□□ -0.52
GGA3-221ENST00000614198 CDC5LQ99459 802 aaKnown RBP11.77□□□□□ -0.52
GGA3-221ENST00000614198 DENND2AQ9ULE3 1009 aa11.77□□□□□ -0.52
GGA3-221ENST00000614198 CCDC171Q6TFL3 1326 aa11.77□□□□□ -0.52
GGA3-221ENST00000614198 BSDC1Q9NW68 430 aaPredicted RBP11.77□□□□□ -0.53
GGA3-221ENST00000614198 ANKIB1Q9P2G1 1089 aa11.77□□□□□ -0.53
GGA3-221ENST00000614198 ABCF2Q9UG63 623 aa11.77□□□□□ -0.53
GGA3-221ENST00000614198 COL24A1Q17RW2 1714 aa11.77□□□□□ -0.53
GGA3-221ENST00000614198 MAST3O60307 1309 aa11.77□□□□□ -0.53
GGA3-221ENST00000614198 HAND2P61296 217 aa11.77□□□□□ -0.53
GGA3-221ENST00000614198 SLC9C2Q5TAH2 1124 aa11.77□□□□□ -0.53
GGA3-221ENST00000614198 LRRC2Q9BYS8 371 aa11.77□□□□□ -0.53
GGA3-221ENST00000614198 INCENPQ9NQS7 918 aa11.77□□□□□ -0.53
GGA3-221ENST00000614198 KIF3AQ9Y496 699 aa11.77□□□□□ -0.53
GGA3-221ENST00000614198 FOXP2O15409 715 aa11.76□□□□□ -0.53
GGA3-221ENST00000614198 PKP1Q13835 747 aa11.76□□□□□ -0.53
GGA3-221ENST00000614198 CHST3Q7LGC8 479 aa11.76□□□□□ -0.53
GGA3-221ENST00000614198 SPATA5Q8NB90 893 aa11.76□□□□□ -0.53
GGA3-221ENST00000614198 NSFL1CQ9UNZ2 370 aaKnown RBP11.76□□□□□ -0.53
GGA3-221ENST00000614198 PPFIA3O75145 1194 aa11.76□□□□□ -0.53
GGA3-221ENST00000614198 CASTP20810 708 aaKnown RBP11.76□□□□□ -0.53
GGA3-221ENST00000614198 ADGRA1Q86SQ6 560 aa11.76□□□□□ -0.53
GGA3-221ENST00000614198 MIGA1Q8NAN2 632 aa11.76□□□□□ -0.53
GGA3-221ENST00000614198 PIBF1Q8WXW3 757 aa11.76□□□□□ -0.53
GGA3-221ENST00000614198 FAM84BQ96KN1 310 aaPredicted RBP11.76□□□□□ -0.53
GGA3-221ENST00000614198 COL1A1P02452 1464 aaPredicted RBP11.76□□□□□ -0.53
GGA3-221ENST00000614198 SLC5A1P13866 664 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms