RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 FRAT2O75474 233 aaPredicted RBP6.19□□□□□ -1.42
SYCP1-209ENST00000613524 EPHA10Q5JZY3 1008 aa6.19□□□□□ -1.42
SYCP1-209ENST00000613524 CLEC4GQ6UXB4 293 aa6.19□□□□□ -1.42
SYCP1-209ENST00000613524 DPP8Q6V1X1 898 aaPredicted RBP6.19□□□□□ -1.42
SYCP1-209ENST00000613524 TAOK3Q9H2K8 898 aa6.19□□□□□ -1.42
SYCP1-209ENST00000613524 ZNF408Q9H9D4 720 aa6.19□□□□□ -1.42
SYCP1-209ENST00000613524 RRAGCQ9HB90 399 aa6.19□□□□□ -1.42
SYCP1-209ENST00000613524 KCNQ5Q9NR82 932 aa6.19□□□□□ -1.42
SYCP1-209ENST00000613524 CNNM1Q9NRU3 951 aa6.19□□□□□ -1.42
SYCP1-209ENST00000613524 ADCY9O60503 1353 aa6.19□□□□□ -1.42
SYCP1-209ENST00000613524 ABCC4O15439 1325 aa6.19□□□□□ -1.42
SYCP1-209ENST00000613524 RNF123Q5XPI4 1314 aa6.19□□□□□ -1.42
SYCP1-209ENST00000613524 TGFB2P61812 414 aa6.18□□□□□ -1.42
SYCP1-209ENST00000613524 KCNH2Q12809 1159 aa6.18□□□□□ -1.42
SYCP1-209ENST00000613524 HSP90AB3PQ58FF7 597 aa6.18□□□□□ -1.42
SYCP1-209ENST00000613524 RBM17Q96I25 401 aaKnown RBP6.18□□□□□ -1.42
SYCP1-209ENST00000613524 MXD3Q9BW11 206 aa6.18□□□□□ -1.42
SYCP1-209ENST00000613524 RNF19AQ9NV58 838 aa6.18□□□□□ -1.42
SYCP1-209ENST00000613524 PA2G4Q9UQ80 394 aaKnown RBP6.18□□□□□ -1.42
SYCP1-209ENST00000613524 COLQQ9Y215 455 aaPredicted RBP6.18□□□□□ -1.42
SYCP1-209ENST00000613524 LRP5O75197 1615 aa6.18□□□□□ -1.42
SYCP1-209ENST00000613524 CASZ1Q86V15 1759 aa6.18□□□□□ -1.42
SYCP1-209ENST00000613524 RCCD1A6NED2 376 aa6.18□□□□□ -1.42
SYCP1-209ENST00000613524 ERVV-1B6SEH8 477 aa6.18□□□□□ -1.42
SYCP1-209ENST00000613524 NFKBIEO00221 500 aa6.18□□□□□ -1.42
SYCP1-209ENST00000613524 LILRB3O75022 631 aa6.18□□□□□ -1.42
SYCP1-209ENST00000613524 UFL1O94874 794 aa6.18□□□□□ -1.42
SYCP1-209ENST00000613524 PRELPP51888 382 aa6.18□□□□□ -1.42
SYCP1-209ENST00000613524 NR6A1Q15406 480 aa6.18□□□□□ -1.42
SYCP1-209ENST00000613524 C20orf194Q5TEA3 1177 aa6.18□□□□□ -1.42
SYCP1-209ENST00000613524 DLK2Q6UY11 383 aa6.18□□□□□ -1.42
SYCP1-209ENST00000613524 MRPL50Q8N5N7 158 aaKnown RBP6.18□□□□□ -1.42
SYCP1-209ENST00000613524 CNKSR1Q969H4 720 aa6.18□□□□□ -1.42
SYCP1-209ENST00000613524 FAM161BQ96MY7 647 aa6.18□□□□□ -1.42
SYCP1-209ENST00000613524 MEIS3Q99687 375 aa6.18□□□□□ -1.42
SYCP1-209ENST00000613524 NPR1P16066 1061 aa6.17□□□□□ -1.42
SYCP1-209ENST00000613524 ITGA6P23229 1130 aa6.17□□□□□ -1.42
SYCP1-209ENST00000613524 RARSP54136 660 aaKnown RBP6.17□□□□□ -1.42
SYCP1-209ENST00000613524 OS9Q13438 667 aaPredicted RBP6.17□□□□□ -1.42
SYCP1-209ENST00000613524 GCKRQ14397 625 aa6.17□□□□□ -1.42
SYCP1-209ENST00000613524 PARP10Q53GL7 1025 aa6.17□□□□□ -1.42
SYCP1-209ENST00000613524 C16orf71Q8IYS4 520 aaPredicted RBP6.17□□□□□ -1.42
SYCP1-209ENST00000613524 SLAIN1Q8ND83 568 aa6.17□□□□□ -1.42
SYCP1-209ENST00000613524 BANK1Q8NDB2 785 aa6.17□□□□□ -1.42
SYCP1-209ENST00000613524 JDP2Q8WYK2 163 aa6.17□□□□□ -1.42
SYCP1-209ENST00000613524 SUCLG2Q96I99 432 aa6.17□□□□□ -1.42
SYCP1-209ENST00000613524 PUS3Q9BZE2 481 aaKnown RBP6.17□□□□□ -1.42
SYCP1-209ENST00000613524 ALG2Q9H553 416 aa6.17□□□□□ -1.42
SYCP1-209ENST00000613524 SHTN1A0MZ66 631 aa6.17□□□□□ -1.42
SYCP1-209ENST00000613524 CFAP99D6REC4 459 aa6.17□□□□□ -1.42
SYCP1-209ENST00000613524 POTEIP0CG38 1075 aa6.17□□□□□ -1.42
SYCP1-209ENST00000613524 POTEJP0CG39 1038 aa6.17□□□□□ -1.42
SYCP1-209ENST00000613524 HMGB2P26583 209 aaKnown RBP6.17□□□□□ -1.42
SYCP1-209ENST00000613524 KLRK1P26718 216 aa6.17□□□□□ -1.42
SYCP1-209ENST00000613524 CHAF1AQ13111 956 aaPredicted RBP6.17□□□□□ -1.42
SYCP1-209ENST00000613524 LRRFIP2Q9Y608 721 aaKnown RBP6.17□□□□□ -1.42
SYCP1-209ENST00000613524 COL5A3P25940 1745 aaPredicted RBP6.17□□□□□ -1.42
SYCP1-209ENST00000613524 RLBP1P12271 317 aa6.17□□□□□ -1.42
SYCP1-209ENST00000613524 ZNF211Q13398 564 aaPredicted RBP6.17□□□□□ -1.42
SYCP1-209ENST00000613524 CCDC57Q2TAC2 916 aa6.17□□□□□ -1.42
SYCP1-209ENST00000613524 POTEGQ6S5H5 508 aa6.17□□□□□ -1.42
SYCP1-209ENST00000613524 ANKRD18AQ8IVF6 992 aa6.17□□□□□ -1.42
SYCP1-209ENST00000613524 MPNDQ8N594 471 aa6.17□□□□□ -1.42
SYCP1-209ENST00000613524 TMEM57Q8N5G2 664 aa6.17□□□□□ -1.42
SYCP1-209ENST00000613524 ZBTB38Q8NAP3 1195 aaPredicted RBP6.17□□□□□ -1.42
SYCP1-209ENST00000613524 BICC1Q9H694 974 aaKnown RBP6.17□□□□□ -1.42
SYCP1-209ENST00000613524 SIPA1L3O60292 1781 aaPredicted RBP6.16□□□□□ -1.42
SYCP1-209ENST00000613524 GRM8O00222 908 aa6.16□□□□□ -1.42
SYCP1-209ENST00000613524 UBTFL1P0CB47 393 aaPredicted RBP6.16□□□□□ -1.42
SYCP1-209ENST00000613524 TRIM27P14373 513 aa6.16□□□□□ -1.42
SYCP1-209ENST00000613524 RPS8P62241 208 aaKnown RBP6.16□□□□□ -1.42
SYCP1-209ENST00000613524 FMR1Q06787 632 aaKnown RBP eCLIP6.16□□□□□ -1.42
SYCP1-209ENST00000613524 CCDC152Q4G0S7 254 aa6.16□□□□□ -1.42
SYCP1-209ENST00000613524 TMEM259Q4ZIN3 620 aa6.16□□□□□ -1.42
SYCP1-209ENST00000613524 CCDC93Q567U6 631 aa6.16□□□□□ -1.42
SYCP1-209ENST00000613524 LDHAL6AQ6ZMR3 332 aa6.16□□□□□ -1.42
SYCP1-209ENST00000613524 ALDH1B1P30837 517 aa6.16□□□□□ -1.42
SYCP1-209ENST00000613524 IGHMBP2P38935 993 aaKnown RBP6.16□□□□□ -1.42
SYCP1-209ENST00000613524 CTSWP56202 376 aa6.16□□□□□ -1.42
SYCP1-209ENST00000613524 GPSM2P81274 684 aa6.16□□□□□ -1.42
SYCP1-209ENST00000613524 IFIT5Q13325 482 aaKnown RBP6.16□□□□□ -1.42
SYCP1-209ENST00000613524 PRKG1Q13976 671 aa6.16□□□□□ -1.42
SYCP1-209ENST00000613524 WASHC4Q2M389 1173 aa6.16□□□□□ -1.42
SYCP1-209ENST00000613524 ISCA1Q9BUE6 129 aa6.16□□□□□ -1.42
SYCP1-209ENST00000613524 TMEM121BQ9BXQ6 578 aaPredicted RBP6.16□□□□□ -1.42
SYCP1-209ENST00000613524 BIN2Q9UBW5 565 aaPredicted RBP6.16□□□□□ -1.42
SYCP1-209ENST00000613524 RCAN3Q9UKA8 241 aa6.16□□□□□ -1.42
SYCP1-209ENST00000613524 USTQ9Y2C2 406 aa6.16□□□□□ -1.42
SYCP1-209ENST00000613524 NUP98P52948 1817 aa6.16□□□□□ -1.42
SYCP1-209ENST00000613524 ZNF521Q96K83 1311 aa6.16□□□□□ -1.42
SYCP1-209ENST00000613524 KDM3BQ7LBC6 1761 aa6.16□□□□□ -1.42
SYCP1-209ENST00000613524 C10orf71Q711Q0 1435 aa6.15□□□□□ -1.42
SYCP1-209ENST00000613524 AFDNP55196 1824 aaKnown RBP6.15□□□□□ -1.42
SYCP1-209ENST00000613524 SLX4Q8IY92 1834 aa6.15□□□□□ -1.42
SYCP1-209ENST00000613524 HOXB7P09629 217 aa6.15□□□□□ -1.42
SYCP1-209ENST00000613524 LRRC24Q50LG9 513 aa6.15□□□□□ -1.42
SYCP1-209ENST00000613524 BEND3Q5T5X7 828 aa6.15□□□□□ -1.42
SYCP1-209ENST00000613524 VPS37DQ86XT2 251 aa6.15□□□□□ -1.42
SYCP1-209ENST00000613524 CCDC191Q8NCU4 936 aa6.15□□□□□ -1.42
SYCP1-209ENST00000613524 LINS1Q8NG48 757 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms