RNA–Protein interactions for RNA: ENST00000611659.4

TPM3-223, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-223ENST00000611659 DPF2Q92785 391 aa13.82□□□□□ -0.2
TPM3-223ENST00000611659 C8orf76Q96K31 380 aa13.82□□□□□ -0.2
TPM3-223ENST00000611659 E7EWF7 191 aa13.82□□□□□ -0.2
TPM3-223ENST00000611659 TADA3O75528 432 aa13.82□□□□□ -0.2
TPM3-223ENST00000611659 NCAPHQ15003 741 aa13.82□□□□□ -0.2
TPM3-223ENST00000611659 SMARCE1Q969G3 411 aa13.82□□□□□ -0.2
TPM3-223ENST00000611659 TULP2O00295 520 aa13.81□□□□□ -0.2
TPM3-223ENST00000611659 FANCGO15287 622 aa13.81□□□□□ -0.2
TPM3-223ENST00000611659 PIP4K2AP48426 406 aaPredicted RBP13.81□□□□□ -0.2
TPM3-223ENST00000611659 GYS2P54840 703 aa13.81□□□□□ -0.2
TPM3-223ENST00000611659 TRIM65Q6PJ69 517 aa13.81□□□□□ -0.2
TPM3-223ENST00000611659 PDILTQ8N807 584 aa13.81□□□□□ -0.2
TPM3-223ENST00000611659 KCNG4Q8TDN1 519 aa13.81□□□□□ -0.2
TPM3-223ENST00000611659 SETD1BQ9UPS6 1966 aaKnown RBP13.81□□□□□ -0.2
TPM3-223ENST00000611659 A0A1W2PQ27 194 aa13.81□□□□□ -0.2
TPM3-223ENST00000611659 A0A1W2PQ64 194 aa13.81□□□□□ -0.2
TPM3-223ENST00000611659 A0A1W2PQD8 194 aa13.81□□□□□ -0.2
TPM3-223ENST00000611659 TUBB4AP04350 444 aa13.81□□□□□ -0.2
TPM3-223ENST00000611659 FDPSP14324 419 aaKnown RBP13.81□□□□□ -0.2
TPM3-223ENST00000611659 GNG11P61952 73 aa13.81□□□□□ -0.2
TPM3-223ENST00000611659 PDE4CQ08493 712 aa13.81□□□□□ -0.2
TPM3-223ENST00000611659 LRRFIP1Q32MZ4 808 aaKnown RBP13.81□□□□□ -0.2
TPM3-223ENST00000611659 BPIFA3Q9BQP9 254 aa13.81□□□□□ -0.2
TPM3-223ENST00000611659 NEURL1BA8MQ27 555 aa13.81□□□□□ -0.2
TPM3-223ENST00000611659 EFCAB8A8MWE9 144 aa13.81□□□□□ -0.2
TPM3-223ENST00000611659 SASH3O75995 380 aa13.81□□□□□ -0.2
TPM3-223ENST00000611659 TOP1P11387 765 aaKnown RBP13.81□□□□□ -0.2
TPM3-223ENST00000611659 GCKRQ14397 625 aa13.81□□□□□ -0.2
TPM3-223ENST00000611659 PIK3C2AO00443 1686 aa13.8□□□□□ -0.2
TPM3-223ENST00000611659 PFKFB1P16118 471 aa13.8□□□□□ -0.2
TPM3-223ENST00000611659 KCNJ6P48051 423 aa13.8□□□□□ -0.2
TPM3-223ENST00000611659 EXOSC10Q01780 885 aaKnown RBP13.8□□□□□ -0.2
TPM3-223ENST00000611659 SMC1AQ14683 1233 aaKnown RBP13.8□□□□□ -0.2
TPM3-223ENST00000611659 TTLL5Q6EMB2 1281 aa13.8□□□□□ -0.2
TPM3-223ENST00000611659 UBE3BQ7Z3V4 1068 aa13.8□□□□□ -0.2
TPM3-223ENST00000611659 TXLNBQ8N3L3 684 aa13.8□□□□□ -0.2
TPM3-223ENST00000611659 DDX21Q9NR30 783 aaKnown RBP eCLIP13.8□□□□□ -0.2
TPM3-223ENST00000611659 PARP3Q9Y6F1 533 aa13.8□□□□□ -0.2
TPM3-223ENST00000611659 DIP2BQ9P265 1576 aa13.8□□□□□ -0.2
TPM3-223ENST00000611659 TMEM232C9JQI7 657 aa13.8□□□□□ -0.2
TPM3-223ENST00000611659 HAND2P61296 217 aa13.8□□□□□ -0.2
TPM3-223ENST00000611659 GPS2Q13227 327 aa13.8□□□□□ -0.2
TPM3-223ENST00000611659 SLC39A6Q13433 755 aa13.8□□□□□ -0.2
TPM3-223ENST00000611659 KBTBD3Q8NAB2 608 aa13.8□□□□□ -0.2
TPM3-223ENST00000611659 XAGE3Q8WTP9 111 aa13.8□□□□□ -0.2
TPM3-223ENST00000611659 IP6K1Q92551 441 aa13.8□□□□□ -0.2
TPM3-223ENST00000611659 ZFP91Q96JP5 570 aaPredicted RBP13.8□□□□□ -0.2
TPM3-223ENST00000611659 HAUS7Q99871 368 aa13.8□□□□□ -0.2
TPM3-223ENST00000611659 SRRTQ9BXP5 876 aaKnown RBP13.8□□□□□ -0.2
TPM3-223ENST00000611659 ZSWIM4Q9H7M6 989 aa13.8□□□□□ -0.2
TPM3-223ENST00000611659 UTYO14607 1347 aa13.8□□□□□ -0.2
TPM3-223ENST00000611659 CASQ1P31415 396 aa13.79□□□□□ -0.2
TPM3-223ENST00000611659 PTPN12Q05209 780 aaKnown RBP13.79□□□□□ -0.2
TPM3-223ENST00000611659 DHX8Q14562 1220 aaKnown RBP13.79□□□□□ -0.2
TPM3-223ENST00000611659 CCDC158Q5M9N0 1113 aa13.79□□□□□ -0.2
TPM3-223ENST00000611659 COPS6Q7L5N1 327 aa13.79□□□□□ -0.2
TPM3-223ENST00000611659 SALL1Q9NSC2 1324 aa13.79□□□□□ -0.2
TPM3-223ENST00000611659 CPLX1O14810 134 aa13.79□□□□□ -0.2
TPM3-223ENST00000611659 ZSCAN12O43309 604 aa13.79□□□□□ -0.2
TPM3-223ENST00000611659 MYSM1Q5VVJ2 828 aa13.79□□□□□ -0.2
TPM3-223ENST00000611659 REXO1L1PQ8IX06 675 aa13.79□□□□□ -0.2
TPM3-223ENST00000611659 AGLP35573 1532 aa13.79□□□□□ -0.2
TPM3-223ENST00000611659 TBC1D8O95759 1140 aa13.79□□□□□ -0.2
TPM3-223ENST00000611659 TPM1P09493 284 aa13.79□□□□□ -0.2
TPM3-223ENST00000611659 TNNT3P45378 269 aaPredicted RBP13.79□□□□□ -0.2
TPM3-223ENST00000611659 CC2D1AQ6P1N0 951 aaPredicted RBP13.79□□□□□ -0.2
TPM3-223ENST00000611659 FEZ2Q9UHY8 353 aaPredicted RBP13.79□□□□□ -0.2
TPM3-223ENST00000611659 CBFA2T2O43439 604 aa13.78□□□□□ -0.2
TPM3-223ENST00000611659 HSPD1P10809 573 aaKnown RBP13.78□□□□□ -0.2
TPM3-223ENST00000611659 ZNF274Q96GC6 653 aaPredicted RBP13.78□□□□□ -0.2
TPM3-223ENST00000611659 WDR24Q96S15 920 aa13.78□□□□□ -0.2
TPM3-223ENST00000611659 ARFGAP3Q9NP61 516 aa13.78□□□□□ -0.2
TPM3-223ENST00000611659 COPRSQ9NQ92 184 aa13.78□□□□□ -0.2
TPM3-223ENST00000611659 PPP2R2CQ9Y2T4 447 aa13.78□□□□□ -0.2
TPM3-223ENST00000611659 NEDD4P46934 1319 aa13.78□□□□□ -0.2
TPM3-223ENST00000611659 ATP5J2-PTCD1G3V325 749 aa13.78□□□□□ -0.2
TPM3-223ENST00000611659 PTCD1O75127 700 aaKnown RBP13.78□□□□□ -0.2
TPM3-223ENST00000611659 SYKP43405 635 aa13.78□□□□□ -0.2
TPM3-223ENST00000611659 MYL5Q02045 173 aa13.78□□□□□ -0.2
TPM3-223ENST00000611659 PPP2R3AQ06190 1150 aa13.78□□□□□ -0.2
TPM3-223ENST00000611659 POLR3EQ9NVU0 708 aa13.78□□□□□ -0.2
TPM3-223ENST00000611659 PAG1Q9NWQ8 432 aa13.78□□□□□ -0.2
TPM3-223ENST00000611659 VWA3AA6NCI4 1184 aa13.77□□□□□ -0.2
TPM3-223ENST00000611659 GOLGA8BA8MQT2 603 aa13.77□□□□□ -0.2
TPM3-223ENST00000611659 YEATS4O95619 227 aa13.77□□□□□ -0.2
TPM3-223ENST00000611659 LMAN1P49257 510 aa13.77□□□□□ -0.2
TPM3-223ENST00000611659 PNOCQ13519 176 aa13.77□□□□□ -0.2
TPM3-223ENST00000611659 CCDC191Q8NCU4 936 aa13.77□□□□□ -0.2
TPM3-223ENST00000611659 FANCLQ9NW38 375 aa13.77□□□□□ -0.2
TPM3-223ENST00000611659 KLF18A0A0U1RQI7 1052 aa13.77□□□□□ -0.21
TPM3-223ENST00000611659 KIF28PB7ZC32 967 aa13.77□□□□□ -0.21
TPM3-223ENST00000611659 TIMM10P62072 90 aa13.77□□□□□ -0.21
TPM3-223ENST00000611659 PDIA6Q15084 440 aa13.77□□□□□ -0.21
TPM3-223ENST00000611659 ZSCAN26Q16670 478 aa13.77□□□□□ -0.21
TPM3-223ENST00000611659 ANO1Q5XXA6 986 aa13.77□□□□□ -0.21
TPM3-223ENST00000611659 HSD3B7Q9H2F3 369 aa13.77□□□□□ -0.21
TPM3-223ENST00000611659 NCAPD2Q15021 1401 aa13.77□□□□□ -0.21
TPM3-223ENST00000611659 IKBKBO14920 756 aa13.77□□□□□ -0.21
TPM3-223ENST00000611659 WDHD1O75717 1129 aaPredicted RBP13.77□□□□□ -0.21
TPM3-223ENST00000611659 PSME1Q06323 249 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms