RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 EFCAB8A8MWE9 144 aa16.69■□□□□ 0.26
VPS36-207ENST00000611132 LARGE1O95461 756 aa16.69■□□□□ 0.26
VPS36-207ENST00000611132 MFSD6Q6ZSS7 791 aa16.69■□□□□ 0.26
VPS36-207ENST00000611132 KLHDC4Q8TBB5 520 aa16.69■□□□□ 0.26
VPS36-207ENST00000611132 ABCF2Q9UG63 623 aa16.69■□□□□ 0.26
VPS36-207ENST00000611132 BMP15O95972 392 aa16.68■□□□□ 0.26
VPS36-207ENST00000611132 CT47A1Q5JQC4 288 aaPredicted RBP16.68■□□□□ 0.26
VPS36-207ENST00000611132 POGZQ7Z3K3 1410 aa16.68■□□□□ 0.26
VPS36-207ENST00000611132 NEK11Q8NG66 645 aa16.68■□□□□ 0.26
VPS36-207ENST00000611132 DHX58Q96C10 678 aa16.68■□□□□ 0.26
VPS36-207ENST00000611132 NAA15Q9BXJ9 866 aaKnown RBP16.68■□□□□ 0.26
VPS36-207ENST00000611132 DDX21Q9NR30 783 aaKnown RBP eCLIP16.68■□□□□ 0.26
VPS36-207ENST00000611132 DDX41Q9UJV9 622 aaKnown RBP16.68■□□□□ 0.26
VPS36-207ENST00000611132 TNNI3KQ59H18 835 aa16.68■□□□□ 0.26
VPS36-207ENST00000611132 SOGA3Q5TF21 947 aa16.68■□□□□ 0.26
VPS36-207ENST00000611132 IQCA1Q86XH1 822 aa16.68■□□□□ 0.26
VPS36-207ENST00000611132 GUCA1BQ9UMX6 200 aa16.68■□□□□ 0.26
VPS36-207ENST00000611132 FPGT-TNNI3KV9GXZ4 949 aa16.68■□□□□ 0.26
VPS36-207ENST00000611132 AATKQ6ZMQ8 1374 aa16.68■□□□□ 0.26
VPS36-207ENST00000611132 HSF2BPO75031 334 aa16.68■□□□□ 0.26
VPS36-207ENST00000611132 TRIM21P19474 475 aaKnown RBP16.68■□□□□ 0.26
VPS36-207ENST00000611132 IBSPP21815 317 aaPredicted RBP16.68■□□□□ 0.26
VPS36-207ENST00000611132 DNA2P51530 1060 aa16.68■□□□□ 0.26
VPS36-207ENST00000611132 DBNDD2Q9BQY9 259 aa16.68■□□□□ 0.26
VPS36-207ENST00000611132 HOXC9P31274 260 aa16.68■□□□□ 0.26
VPS36-207ENST00000611132 SLC39A6Q13433 755 aa16.68■□□□□ 0.26
VPS36-207ENST00000611132 KCNH3Q9ULD8 1083 aa16.68■□□□□ 0.26
VPS36-207ENST00000611132 NLRP5P59047 1200 aa16.67■□□□□ 0.26
VPS36-207ENST00000611132 TERF2Q15554 542 aa16.67■□□□□ 0.26
VPS36-207ENST00000611132 RMND1Q9NWS8 449 aa16.67■□□□□ 0.26
VPS36-207ENST00000611132 UNC13BO14795 1591 aa16.67■□□□□ 0.26
VPS36-207ENST00000611132 UHRF1BP1LA0JNW5 1464 aa16.67■□□□□ 0.26
VPS36-207ENST00000611132 LDHAL6AQ6ZMR3 332 aa16.67■□□□□ 0.26
VPS36-207ENST00000611132 BMP2KQ9NSY1 1161 aaPredicted RBP16.67■□□□□ 0.26
VPS36-207ENST00000611132 OPA1O60313 960 aa16.67■□□□□ 0.26
VPS36-207ENST00000611132 RTN1Q16799 776 aa16.67■□□□□ 0.26
VPS36-207ENST00000611132 TDRD12Q587J7 1177 aaKnown RBP16.67■□□□□ 0.26
VPS36-207ENST00000611132 IGSF22Q8N9C0 903 aa16.67■□□□□ 0.26
VPS36-207ENST00000611132 SUCLG2Q96I99 432 aa16.67■□□□□ 0.26
VPS36-207ENST00000611132 KRT86O43790 486 aa16.66■□□□□ 0.26
VPS36-207ENST00000611132 WTAPQ15007 396 aa16.66■□□□□ 0.26
VPS36-207ENST00000611132 C11orf57Q6ZUT1 292 aaPredicted RBP16.66■□□□□ 0.26
VPS36-207ENST00000611132 CATIPQ7Z7H3 387 aa16.66■□□□□ 0.26
VPS36-207ENST00000611132 EAF2Q96CJ1 260 aaPredicted RBP16.66■□□□□ 0.26
VPS36-207ENST00000611132 TRIM47Q96LD4 638 aa16.66■□□□□ 0.26
VPS36-207ENST00000611132 MADDQ8WXG6 1647 aa16.66■□□□□ 0.26
VPS36-207ENST00000611132 RANBP6O60518 1105 aaKnown RBP16.66■□□□□ 0.26
VPS36-207ENST00000611132 TOM1L2Q6ZVM7 507 aa16.66■□□□□ 0.26
VPS36-207ENST00000611132 PROSER2Q86WR7 435 aaPredicted RBP16.66■□□□□ 0.26
VPS36-207ENST00000611132 KBTBD3Q8NAB2 608 aa16.66■□□□□ 0.26
VPS36-207ENST00000611132 NFE2L3Q9Y4A8 694 aa16.66■□□□□ 0.26
VPS36-207ENST00000611132 ARHGEF10O15013 1369 aa16.66■□□□□ 0.26
VPS36-207ENST00000611132 TRIM75PA6NK02 468 aa16.66■□□□□ 0.26
VPS36-207ENST00000611132 MTX1Q13505 466 aa16.66■□□□□ 0.26
VPS36-207ENST00000611132 HLTFQ14527 1009 aaKnown RBP eCLIP16.66■□□□□ 0.26
VPS36-207ENST00000611132 RBM33Q96EV2 1170 aaKnown RBP16.66■□□□□ 0.26
VPS36-207ENST00000611132 PPP1R13BQ96KQ4 1090 aa16.66■□□□□ 0.26
VPS36-207ENST00000611132 KRT83P78385 493 aa16.66■□□□□ 0.26
VPS36-207ENST00000611132 FBXO38Q6PIJ6 1188 aa16.66■□□□□ 0.26
VPS36-207ENST00000611132 NAPGQ99747 312 aaPredicted RBP16.66■□□□□ 0.26
VPS36-207ENST00000611132 MYO1BO43795 1136 aa16.65■□□□□ 0.26
VPS36-207ENST00000611132 AKR1B10O60218 316 aa16.65■□□□□ 0.26
VPS36-207ENST00000611132 BRD3Q15059 726 aa16.65■□□□□ 0.26
VPS36-207ENST00000611132 IFNL2Q8IZJ0 200 aa16.65■□□□□ 0.26
VPS36-207ENST00000611132 ZHX3Q9H4I2 956 aa16.65■□□□□ 0.26
VPS36-207ENST00000611132 NLRP1Q9C000 1473 aa16.65■□□□□ 0.26
VPS36-207ENST00000611132 G3V3G9 751 aa16.65■□□□□ 0.26
VPS36-207ENST00000611132 SSBP05455 408 aaKnown RBP eCLIP16.65■□□□□ 0.26
VPS36-207ENST00000611132 DCAF8Q5TAQ9 597 aa16.65■□□□□ 0.26
VPS36-207ENST00000611132 TAX1BP1Q86VP1 789 aa16.65■□□□□ 0.26
VPS36-207ENST00000611132 MLKLQ8NB16 471 aa16.65■□□□□ 0.26
VPS36-207ENST00000611132 PFKFB2O60825 505 aa16.65■□□□□ 0.26
VPS36-207ENST00000611132 UBA7P41226 1012 aa16.65■□□□□ 0.26
VPS36-207ENST00000611132 MYSM1Q5VVJ2 828 aa16.65■□□□□ 0.26
VPS36-207ENST00000611132 EDC3Q96F86 508 aaKnown RBP16.65■□□□□ 0.26
VPS36-207ENST00000611132 TTF2Q9UNY4 1162 aaKnown RBP16.65■□□□□ 0.26
VPS36-207ENST00000611132 FGFR1OPO95684 399 aaKnown RBP16.65■□□□□ 0.26
VPS36-207ENST00000611132 FAM114A1Q8IWE2 563 aa16.65■□□□□ 0.26
VPS36-207ENST00000611132 FAM76AQ8TAV0 307 aa16.65■□□□□ 0.26
VPS36-207ENST00000611132 AFAP1L1Q8TED9 768 aa16.65■□□□□ 0.26
VPS36-207ENST00000611132 CPSF1Q10570 1443 aaKnown RBP16.64■□□□□ 0.26
VPS36-207ENST00000611132 CCDC194A0A1B0GVG4 234 aa16.64■□□□□ 0.25
VPS36-207ENST00000611132 ANKRD18BA2A2Z9 1011 aa16.64■□□□□ 0.25
VPS36-207ENST00000611132 TMTC2Q8N394 836 aa16.64■□□□□ 0.25
VPS36-207ENST00000611132 CAPZA3Q96KX2 299 aa16.64■□□□□ 0.25
VPS36-207ENST00000611132 KRT23Q9C075 422 aa16.64■□□□□ 0.25
VPS36-207ENST00000611132 KIF1BO60333 1816 aa16.64■□□□□ 0.25
VPS36-207ENST00000611132 MAP3K4Q9Y6R4 1608 aa16.64■□□□□ 0.25
VPS36-207ENST00000611132 RXRAP19793 462 aa16.64■□□□□ 0.25
VPS36-207ENST00000611132 MAATS1Q7Z4T9 603 aa16.64■□□□□ 0.25
VPS36-207ENST00000611132 PCDHA7Q9UN72 937 aa16.64■□□□□ 0.25
VPS36-207ENST00000611132 CUTAO60888 179 aa16.64■□□□□ 0.25
VPS36-207ENST00000611132 ATP5JP18859 108 aa16.64■□□□□ 0.25
VPS36-207ENST00000611132 SLC9C2Q5TAH2 1124 aa16.64■□□□□ 0.25
VPS36-207ENST00000611132 CNNM2Q9H8M5 875 aa16.64■□□□□ 0.25
VPS36-207ENST00000611132 NDUFB9Q9Y6M9 179 aa16.64■□□□□ 0.25
VPS36-207ENST00000611132 ATP8B1O43520 1251 aa16.63■□□□□ 0.25
VPS36-207ENST00000611132 RBM6P78332 1123 aaKnown RBP16.63■□□□□ 0.25
VPS36-207ENST00000611132 CCDC96Q2M329 555 aa16.63■□□□□ 0.25
VPS36-207ENST00000611132 BEND3Q5T5X7 828 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms