RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 FNBP4Q8N3X1 1017 aaPredicted RBP33.12■■■□□ 2.89
CSPG5-205ENST00000610462 ANP32BQ92688 251 aaKnown RBP33.12■■■□□ 2.89
CSPG5-205ENST00000610462 ZNF274Q96GC6 653 aaPredicted RBP33.12■■■□□ 2.89
CSPG5-205ENST00000610462 CNTNAP4Q9C0A0 1308 aa33.12■■■□□ 2.89
CSPG5-205ENST00000610462 HAND2P61296 217 aa33.11■■■□□ 2.89
CSPG5-205ENST00000610462 KRT85P78386 507 aa33.11■■■□□ 2.89
CSPG5-205ENST00000610462 CCDC173Q0VFZ6 552 aa33.11■■■□□ 2.89
CSPG5-205ENST00000610462 CASZ1Q86V15 1759 aa33.11■■■□□ 2.89
CSPG5-205ENST00000610462 SPATA5Q8NB90 893 aa33.11■■■□□ 2.89
CSPG5-205ENST00000610462 PDE6AP16499 860 aa33.1■■■□□ 2.89
CSPG5-205ENST00000610462 CCDC183Q5T5S1 534 aa33.1■■■□□ 2.89
CSPG5-205ENST00000610462 PPP1R9BQ96SB3 815 aa33.1■■■□□ 2.89
CSPG5-205ENST00000610462 SCN7AQ01118 1682 aa33.1■■■□□ 2.89
CSPG5-205ENST00000610462 ZNF532Q9HCE3 1301 aa33.1■■■□□ 2.89
CSPG5-205ENST00000610462 NSUN7Q8NE18 718 aaKnown RBP33.09■■■□□ 2.89
CSPG5-205ENST00000610462 TCRBV5S4A2TA0A5A2 114 aa33.09■■■□□ 2.89
CSPG5-205ENST00000610462 ZNF213O14771 459 aa33.09■■■□□ 2.89
CSPG5-205ENST00000610462 RGL2O15211 777 aa33.09■■■□□ 2.89
CSPG5-205ENST00000610462 CHST3Q7LGC8 479 aa33.09■■■□□ 2.89
CSPG5-205ENST00000610462 BTAF1O14981 1849 aa33.08■■■□□ 2.89
CSPG5-205ENST00000610462 EVCP57679 992 aa33.08■■■□□ 2.89
CSPG5-205ENST00000610462 CHMP4CQ96CF2 233 aa33.08■■■□□ 2.89
CSPG5-205ENST00000610462 WWC3Q9ULE0 1092 aa33.08■■■□□ 2.89
CSPG5-205ENST00000610462 PDIA3P30101 505 aaKnown RBP33.08■■■□□ 2.89
CSPG5-205ENST00000610462 HMGN5P82970 282 aaKnown RBP33.08■■■□□ 2.89
CSPG5-205ENST00000610462 MB21D2Q8IYB1 491 aaPredicted RBP33.08■■■□□ 2.89
CSPG5-205ENST00000610462 FAM184AQ8NB25 1140 aa33.08■■■□□ 2.89
CSPG5-205ENST00000610462 SNAP23O00161 211 aa33.07■■■□□ 2.88
CSPG5-205ENST00000610462 RASGRF1Q13972 1273 aa33.07■■■□□ 2.88
CSPG5-205ENST00000610462 DDX11Q96FC9 970 aa33.07■■■□□ 2.88
CSPG5-205ENST00000610462 TSPY26PQ9H489 355 aa33.07■■■□□ 2.88
CSPG5-205ENST00000610462 CTDNEP1O95476 244 aa33.06■■■□□ 2.88
CSPG5-205ENST00000610462 NCOA7Q8NI08 942 aa33.06■■■□□ 2.88
CSPG5-205ENST00000610462 CDC5LQ99459 802 aaKnown RBP33.06■■■□□ 2.88
CSPG5-205ENST00000610462 ELP1O95163 1332 aa33.06■■■□□ 2.88
CSPG5-205ENST00000610462 THSD7AQ9UPZ6 1657 aa33.06■■■□□ 2.88
CSPG5-205ENST00000610462 A0A1B0GUL6 1792 aa33.06■■■□□ 2.88
CSPG5-205ENST00000610462 LETM1O95202 739 aaPredicted RBP33.06■■■□□ 2.88
CSPG5-205ENST00000610462 MCM5P33992 734 aa33.06■■■□□ 2.88
CSPG5-205ENST00000610462 NHSQ6T4R5 1651 aa33.05■■■□□ 2.88
CSPG5-205ENST00000610462 CHRNDQ07001 517 aa33.05■■■□□ 2.88
CSPG5-205ENST00000610462 ERFEQ4G0M1 354 aa33.05■■■□□ 2.88
CSPG5-205ENST00000610462 KCNQ4P56696 695 aa33.05■■■□□ 2.88
CSPG5-205ENST00000610462 CCT2P78371 535 aaKnown RBP33.05■■■□□ 2.88
CSPG5-205ENST00000610462 FAM173BQ6P4H8 233 aa33.05■■■□□ 2.88
CSPG5-205ENST00000610462 TTC6Q86TZ1 520 aa33.05■■■□□ 2.88
CSPG5-205ENST00000610462 KIF3AQ9Y496 699 aa33.05■■■□□ 2.88
CSPG5-205ENST00000610462 COL4A1P02462 1669 aa33.04■■■□□ 2.88
CSPG5-205ENST00000610462 WDR19Q8NEZ3 1342 aa33.04■■■□□ 2.88
CSPG5-205ENST00000610462 PTPDC1A2A3K4 754 aa33.04■■■□□ 2.88
CSPG5-205ENST00000610462 H3BQV1 296 aa33.04■■■□□ 2.88
CSPG5-205ENST00000610462 RC3H1Q5TC82 1133 aaKnown RBP33.04■■■□□ 2.88
CSPG5-205ENST00000610462 IFFO2Q5TF58 517 aa33.04■■■□□ 2.88
CSPG5-205ENST00000610462 PTF1AQ7RTS3 328 aa33.04■■■□□ 2.88
CSPG5-205ENST00000610462 PRC1O43663 620 aa33.03■■■□□ 2.88
CSPG5-205ENST00000610462 MAP3K12Q12852 859 aa33.03■■■□□ 2.88
CSPG5-205ENST00000610462 RESTQ13127 1097 aa33.03■■■□□ 2.88
CSPG5-205ENST00000610462 SF3B3Q15393 1217 aaKnown RBP33.03■■■□□ 2.88
CSPG5-205ENST00000610462 SCAND2PQ9GZW5 306 aaPredicted RBP33.03■■■□□ 2.88
CSPG5-205ENST00000610462 RALYLQ86SE5 291 aaKnown RBP33.03■■■□□ 2.88
CSPG5-205ENST00000610462 USP21Q9UK80 565 aa33.03■■■□□ 2.88
CSPG5-205ENST00000610462 NAP1L2Q9ULW6 460 aaPredicted RBP33.03■■■□□ 2.88
CSPG5-205ENST00000610462 MYH15Q9Y2K3 1946 aa33.03■■■□□ 2.88
CSPG5-205ENST00000610462 SALL1Q9NSC2 1324 aa33.02■■■□□ 2.88
CSPG5-205ENST00000610462 ZSCAN16Q9H4T2 348 aaPredicted RBP33.02■■■□□ 2.88
CSPG5-205ENST00000610462 TRIM44Q96DX7 344 aaPredicted RBP33.01■■■□□ 2.88
CSPG5-205ENST00000610462 STRBPQ96SI9 672 aaKnown RBP33.01■■■□□ 2.88
CSPG5-205ENST00000610462 NCOA5Q9HCD5 579 aaKnown RBP33.01■■■□□ 2.88
CSPG5-205ENST00000610462 BCAMP50895 628 aa33.01■■■□□ 2.87
CSPG5-205ENST00000610462 TPRNQ4KMQ1 711 aa33.01■■■□□ 2.87
CSPG5-205ENST00000610462 NAA16Q6N069 864 aaPredicted RBP33.01■■■□□ 2.87
CSPG5-205ENST00000610462 AIDAQ96BJ3 306 aa33.01■■■□□ 2.87
CSPG5-205ENST00000610462 SPATA31A6Q5VVP1 1343 aa33■■■□□ 2.87
CSPG5-205ENST00000610462 ANTXR2P58335 489 aa33■■■□□ 2.87
CSPG5-205ENST00000610462 KLHL34Q8N239 644 aa33■■■□□ 2.87
CSPG5-205ENST00000610462 NBPF3Q9H094 633 aa33■■■□□ 2.87
CSPG5-205ENST00000610462 GPHNQ9NQX3 736 aaPredicted RBP33■■■□□ 2.87
CSPG5-205ENST00000610462 APPP05067 770 aa33■■■□□ 2.87
CSPG5-205ENST00000610462 ANKRD18AQ8IVF6 992 aa33■■■□□ 2.87
CSPG5-205ENST00000610462 MAGEB6Q8N7X4 407 aa33■■■□□ 2.87
CSPG5-205ENST00000610462 RRAGDQ9NQL2 400 aaPredicted RBP33■■■□□ 2.87
CSPG5-205ENST00000610462 TAF1P21675 1872 aa32.99■■■□□ 2.87
CSPG5-205ENST00000610462 RPS6KA4O75676 772 aa32.99■■■□□ 2.87
CSPG5-205ENST00000610462 ALX1Q15699 326 aa32.99■■■□□ 2.87
CSPG5-205ENST00000610462 BCL2L12Q9HB09 334 aa32.99■■■□□ 2.87
CSPG5-205ENST00000610462 SLC10A5Q5PT55 438 aa32.98■■■□□ 2.87
CSPG5-205ENST00000610462 C3orf67Q6ZVT6 689 aa32.98■■■□□ 2.87
CSPG5-205ENST00000610462 NARFQ9UHQ1 456 aa32.98■■■□□ 2.87
CSPG5-205ENST00000610462 ZMYM6O95789 1325 aa32.98■■■□□ 2.87
CSPG5-205ENST00000610462 TBC1D9BQ66K14 1250 aa32.98■■■□□ 2.87
CSPG5-205ENST00000610462 COL24A1Q17RW2 1714 aa32.97■■■□□ 2.87
CSPG5-205ENST00000610462 TRDNQ13061 729 aa32.97■■■□□ 2.87
CSPG5-205ENST00000610462 SPATA32Q96LK8 384 aa32.97■■■□□ 2.87
CSPG5-205ENST00000610462 TFIP11Q9UBB9 837 aaKnown RBP32.97■■■□□ 2.87
CSPG5-205ENST00000610462 BICDL1Q6ZP65 573 aa32.97■■■□□ 2.87
CSPG5-205ENST00000610462 TBC1D10CQ8IV04 446 aa32.96■■■□□ 2.87
CSPG5-205ENST00000610462 LEO1Q8WVC0 666 aaPredicted RBP32.96■■■□□ 2.87
CSPG5-205ENST00000610462 BSDC1Q9NW68 430 aaPredicted RBP32.96■■■□□ 2.87
CSPG5-205ENST00000610462 PATL2C9JE40 543 aaKnown RBP32.95■■■□□ 2.87
CSPG5-205ENST00000610462 CHD4Q14839 1912 aa32.95■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms