RNA–Protein interactions for RNA: ENST00000610452.1

COL15A1-205, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL15A1, Length 5,422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-205ENST00000610452 TPX2Q9ULW0 747 aaKnown RBP22.76■■□□□ 1.23
COL15A1-205ENST00000610452 ZBTB12Q9Y330 459 aaPredicted RBP22.76■■□□□ 1.23
COL15A1-205ENST00000610452 CETN3O15182 167 aa22.76■■□□□ 1.23
COL15A1-205ENST00000610452 MAP7Q14244 749 aa22.76■■□□□ 1.23
COL15A1-205ENST00000610452 PUS7Q96PZ0 661 aaKnown RBP22.76■■□□□ 1.23
COL15A1-205ENST00000610452 MEIS3Q99687 375 aa22.76■■□□□ 1.23
COL15A1-205ENST00000610452 PDE11AQ9HCR9 933 aa22.76■■□□□ 1.23
COL15A1-205ENST00000610452 PPP1R7Q15435 360 aa22.75■■□□□ 1.23
COL15A1-205ENST00000610452 CCDC174Q6PII3 467 aa22.75■■□□□ 1.23
COL15A1-205ENST00000610452 ARHGEF2Q92974 986 aaKnown RBP22.75■■□□□ 1.23
COL15A1-205ENST00000610452 GDAP1L1Q96MZ0 367 aa22.75■■□□□ 1.23
COL15A1-205ENST00000610452 DCTPP1Q9H773 170 aa22.75■■□□□ 1.23
COL15A1-205ENST00000610452 LUC7L3O95232 432 aaKnown RBP22.75■■□□□ 1.23
COL15A1-205ENST00000610452 CCDC110Q8TBZ0 833 aa22.75■■□□□ 1.23
COL15A1-205ENST00000610452 PPANQ9NQ55 473 aaKnown RBP22.75■■□□□ 1.23
COL15A1-205ENST00000610452 STRN4Q9NRL3 753 aa22.75■■□□□ 1.23
COL15A1-205ENST00000610452 ANAPC4Q9UJX5 808 aa22.75■■□□□ 1.23
COL15A1-205ENST00000610452 GNAT3A8MTJ3 354 aa22.75■■□□□ 1.23
COL15A1-205ENST00000610452 WWC2Q6AWC2 1192 aa22.75■■□□□ 1.23
COL15A1-205ENST00000610452 CYP26C1Q6V0L0 522 aa22.75■■□□□ 1.23
COL15A1-205ENST00000610452 IQCA1Q86XH1 822 aa22.75■■□□□ 1.23
COL15A1-205ENST00000610452 CAMSAP2Q08AD1 1489 aa22.75■■□□□ 1.23
COL15A1-205ENST00000610452 STAT6P42226 847 aa22.75■■□□□ 1.23
COL15A1-205ENST00000610452 ZBTB40Q9NUA8 1239 aa22.75■■□□□ 1.23
COL15A1-205ENST00000610452 CCDC26Q8TAB7 109 aa22.75■■□□□ 1.23
COL15A1-205ENST00000610452 CCDC141Q6ZP82 1450 aa22.74■■□□□ 1.23
COL15A1-205ENST00000610452 HGSO14964 777 aaPredicted RBP22.74■■□□□ 1.23
COL15A1-205ENST00000610452 ATP5DP30049 168 aa22.74■■□□□ 1.23
COL15A1-205ENST00000610452 ETF1P62495 437 aaKnown RBP22.74■■□□□ 1.23
COL15A1-205ENST00000610452 CCDC170Q8IYT3 715 aa22.74■■□□□ 1.23
COL15A1-205ENST00000610452 HIP1RO75146 1068 aa22.74■■□□□ 1.23
COL15A1-205ENST00000610452 RNF41Q9H4P4 317 aaPredicted RBP22.74■■□□□ 1.23
COL15A1-205ENST00000610452 JPH2Q9BR39 696 aaPredicted RBP22.74■■□□□ 1.23
COL15A1-205ENST00000610452 MBIPQ9NS73 344 aa22.74■■□□□ 1.23
COL15A1-205ENST00000610452 ATP2A1O14983 1001 aa22.74■■□□□ 1.23
COL15A1-205ENST00000610452 RPSAP08865 295 aaKnown RBP22.74■■□□□ 1.23
COL15A1-205ENST00000610452 CATIPQ7Z7H3 387 aa22.74■■□□□ 1.23
COL15A1-205ENST00000610452 SMIM24O75264 130 aa22.73■■□□□ 1.23
COL15A1-205ENST00000610452 PPARDQ03181 441 aa22.73■■□□□ 1.23
COL15A1-205ENST00000610452 MYO1CO00159 1063 aa22.73■■□□□ 1.23
COL15A1-205ENST00000610452 ARID5AQ03989 594 aa22.73■■□□□ 1.23
COL15A1-205ENST00000610452 PDE1CQ14123 709 aaPredicted RBP22.73■■□□□ 1.23
COL15A1-205ENST00000610452 MCUR1Q96AQ8 359 aa22.73■■□□□ 1.23
COL15A1-205ENST00000610452 LRRD1A4D1F6 860 aa22.73■■□□□ 1.23
COL15A1-205ENST00000610452 PAK2Q13177 524 aa22.73■■□□□ 1.23
COL15A1-205ENST00000610452 CCDC61Q9Y6R9 512 aa22.73■■□□□ 1.23
COL15A1-205ENST00000610452 STK38LQ9Y2H1 464 aa22.72■■□□□ 1.23
COL15A1-205ENST00000610452 RUFY3Q7L099 469 aa22.72■■□□□ 1.23
COL15A1-205ENST00000610452 GOLGA8KD6RF30 607 aa22.72■■□□□ 1.23
COL15A1-205ENST00000610452 CASQ2O14958 399 aaPredicted RBP22.72■■□□□ 1.23
COL15A1-205ENST00000610452 RANBP6O60518 1105 aaKnown RBP22.72■■□□□ 1.23
COL15A1-205ENST00000610452 MUM1Q2TAK8 710 aa22.72■■□□□ 1.23
COL15A1-205ENST00000610452 SREK1Q8WXA9 508 aaKnown RBP22.72■■□□□ 1.23
COL15A1-205ENST00000610452 CALCOCO2Q13137 446 aa22.72■■□□□ 1.23
COL15A1-205ENST00000610452 PHLDB2Q86SQ0 1253 aa22.72■■□□□ 1.23
COL15A1-205ENST00000610452 GBP7Q8N8V2 638 aaPredicted RBP22.72■■□□□ 1.23
COL15A1-205ENST00000610452 PFDN1O60925 122 aa22.72■■□□□ 1.23
COL15A1-205ENST00000610452 CHMLP26374 656 aa22.72■■□□□ 1.23
COL15A1-205ENST00000610452 RPUSD2Q8IZ73 545 aaKnown RBP22.72■■□□□ 1.23
COL15A1-205ENST00000610452 TRIM14Q14142 442 aa22.71■■□□□ 1.23
COL15A1-205ENST00000610452 N4BP2L2Q92802 583 aaPredicted RBP22.71■■□□□ 1.23
COL15A1-205ENST00000610452 BRD1O95696 1058 aa22.71■■□□□ 1.23
COL15A1-205ENST00000610452 BRAPQ7Z569 592 aa22.71■■□□□ 1.23
COL15A1-205ENST00000610452 TBC1D5Q92609 795 aa22.71■■□□□ 1.23
COL15A1-205ENST00000610452 LRRC27Q9C0I9 530 aa22.71■■□□□ 1.23
COL15A1-205ENST00000610452 METTL24Q5JXM2 366 aa22.71■■□□□ 1.23
COL15A1-205ENST00000610452 LRRC8AQ8IWT6 810 aa22.71■■□□□ 1.23
COL15A1-205ENST00000610452 EXOC4Q96A65 974 aa22.71■■□□□ 1.23
COL15A1-205ENST00000610452 PTPDC1A2A3K4 754 aa22.71■■□□□ 1.23
COL15A1-205ENST00000610452 SF3B2Q13435 895 aaKnown RBP22.71■■□□□ 1.23
COL15A1-205ENST00000610452 DBN1Q16643 649 aa22.71■■□□□ 1.23
COL15A1-205ENST00000610452 GPT2Q8TD30 523 aa22.71■■□□□ 1.23
COL15A1-205ENST00000610452 DIXDC1Q155Q3 683 aa22.7■■□□□ 1.22
COL15A1-205ENST00000610452 JAKMIP2Q96AA8 810 aa22.7■■□□□ 1.22
COL15A1-205ENST00000610452 FAM204AQ9H8W3 233 aa22.7■■□□□ 1.22
COL15A1-205ENST00000610452 CCT6AP40227 531 aaKnown RBP22.7■■□□□ 1.22
COL15A1-205ENST00000610452 ZNF131P52739 623 aa22.7■■□□□ 1.22
COL15A1-205ENST00000610452 FAM69CQ0P6D2 419 aa22.7■■□□□ 1.22
COL15A1-205ENST00000610452 ESCO1Q5FWF5 840 aa22.7■■□□□ 1.22
COL15A1-205ENST00000610452 DDX27Q96GQ7 796 aaKnown RBP22.7■■□□□ 1.22
COL15A1-205ENST00000610452 SEC31AO94979 1220 aaKnown RBP22.7■■□□□ 1.22
COL15A1-205ENST00000610452 SF3A3Q12874 501 aaKnown RBP eCLIP22.7■■□□□ 1.22
COL15A1-205ENST00000610452 TMTC1Q8IUR5 882 aa22.7■■□□□ 1.22
COL15A1-205ENST00000610452 CCDC85AQ96PX6 553 aaPredicted RBP22.7■■□□□ 1.22
COL15A1-205ENST00000610452 TATP17735 454 aaPredicted RBP22.69■■□□□ 1.22
COL15A1-205ENST00000610452 EMILIN1Q9Y6C2 1016 aa22.69■■□□□ 1.22
COL15A1-205ENST00000610452 FYB2Q5VWT5 728 aa22.69■■□□□ 1.22
COL15A1-205ENST00000610452 FAM173BQ6P4H8 233 aa22.69■■□□□ 1.22
COL15A1-205ENST00000610452 TSNARE1Q96NA8 513 aa22.69■■□□□ 1.22
COL15A1-205ENST00000610452 GKAP1Q5VSY0 366 aaPredicted RBP22.69■■□□□ 1.22
COL15A1-205ENST00000610452 MMS22LQ6ZRQ5 1243 aa22.69■■□□□ 1.22
COL15A1-205ENST00000610452 STAG1Q8WVM7 1258 aa22.69■■□□□ 1.22
COL15A1-205ENST00000610452 NUDT16Q96DE0 195 aaKnown RBP22.69■■□□□ 1.22
COL15A1-205ENST00000610452 RPGRIP1Q96KN7 1286 aa22.69■■□□□ 1.22
COL15A1-205ENST00000610452 ABCF2Q9UG63 623 aa22.69■■□□□ 1.22
COL15A1-205ENST00000610452 ADGRF5Q8IZF2 1346 aa22.69■■□□□ 1.22
COL15A1-205ENST00000610452 NESP48681 1621 aa22.69■■□□□ 1.22
COL15A1-205ENST00000610452 LEO1Q8WVC0 666 aaPredicted RBP22.69■■□□□ 1.22
COL15A1-205ENST00000610452 DDX23Q9BUQ8 820 aaKnown RBP22.69■■□□□ 1.22
COL15A1-205ENST00000610452 ZBTB43O43298 467 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms