RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 IFFO1Q0D2I5 559 aa12.57□□□□□ -0.4
SHANK2-219ENST00000606715 PRKG1Q13976 671 aa12.57□□□□□ -0.4
SHANK2-219ENST00000606715 EXOC1Q9NV70 894 aa12.57□□□□□ -0.4
SHANK2-219ENST00000606715 MCM4P33991 863 aa12.57□□□□□ -0.4
SHANK2-219ENST00000606715 PRPF4BQ13523 1007 aaKnown RBP12.57□□□□□ -0.4
SHANK2-219ENST00000606715 SPOUT1Q5T280 376 aaKnown RBP12.57□□□□□ -0.4
SHANK2-219ENST00000606715 TTC6Q86TZ1 520 aa12.57□□□□□ -0.4
SHANK2-219ENST00000606715 FAM135BQ49AJ0 1406 aa12.57□□□□□ -0.4
SHANK2-219ENST00000606715 CEP85Q6P2H3 762 aa12.57□□□□□ -0.4
SHANK2-219ENST00000606715 ZBTB21Q9ULJ3 1066 aa12.57□□□□□ -0.4
SHANK2-219ENST00000606715 KIAA0232Q92628 1395 aa12.57□□□□□ -0.4
SHANK2-219ENST00000606715 ZBTB43O43298 467 aa12.57□□□□□ -0.4
SHANK2-219ENST00000606715 PRIM1P49642 420 aaKnown RBP12.57□□□□□ -0.4
SHANK2-219ENST00000606715 RAB11FIP4Q86YS3 637 aa12.57□□□□□ -0.4
SHANK2-219ENST00000606715 ABCC3O15438 1527 aa12.57□□□□□ -0.4
SHANK2-219ENST00000606715 GCOM1H8Y6P7 765 aaPredicted RBP12.57□□□□□ -0.4
SHANK2-219ENST00000606715 MYZAPP0CAP1 466 aa12.57□□□□□ -0.4
SHANK2-219ENST00000606715 AATKQ6ZMQ8 1374 aa12.56□□□□□ -0.4
SHANK2-219ENST00000606715 RTL9Q8NET4 1388 aa12.56□□□□□ -0.4
SHANK2-219ENST00000606715 GOLGA6L10A0A0M3HER8 536 aa12.56□□□□□ -0.4
SHANK2-219ENST00000606715 EYA2O00167 538 aa12.56□□□□□ -0.4
SHANK2-219ENST00000606715 UBE4AQ14139 1066 aa12.56□□□□□ -0.4
SHANK2-219ENST00000606715 CWF19L2Q2TBE0 894 aaKnown RBP12.56□□□□□ -0.4
SHANK2-219ENST00000606715 ERCC6L2Q5T890 1561 aa12.56□□□□□ -0.4
SHANK2-219ENST00000606715 SDSP20132 328 aa12.56□□□□□ -0.4
SHANK2-219ENST00000606715 MCM9Q9NXL9 1143 aa12.56□□□□□ -0.4
SHANK2-219ENST00000606715 ATP7BP35670 1465 aa12.56□□□□□ -0.4
SHANK2-219ENST00000606715 RRP36Q96EU6 259 aaKnown RBP12.56□□□□□ -0.4
SHANK2-219ENST00000606715 DDX19AQ9NUU7 478 aaKnown RBP12.56□□□□□ -0.4
SHANK2-219ENST00000606715 ALDH1B1P30837 517 aa12.55□□□□□ -0.4
SHANK2-219ENST00000606715 PAFAH1B1P43034 410 aa12.55□□□□□ -0.4
SHANK2-219ENST00000606715 MPNDQ8N594 471 aa12.55□□□□□ -0.4
SHANK2-219ENST00000606715 TSPYL6Q8N831 410 aa12.55□□□□□ -0.4
SHANK2-219ENST00000606715 KIF5CO60282 957 aa12.55□□□□□ -0.4
SHANK2-219ENST00000606715 UFL1O94874 794 aa12.55□□□□□ -0.4
SHANK2-219ENST00000606715 RAB3GAP1Q15042 981 aa12.55□□□□□ -0.4
SHANK2-219ENST00000606715 PUM3Q15397 648 aaKnown RBP12.55□□□□□ -0.4
SHANK2-219ENST00000606715 PANK2Q9BZ23 570 aa12.55□□□□□ -0.4
SHANK2-219ENST00000606715 TOP1P11387 765 aaKnown RBP12.55□□□□□ -0.4
SHANK2-219ENST00000606715 RBM25P49756 843 aaKnown RBP12.55□□□□□ -0.4
SHANK2-219ENST00000606715 TNPO1Q92973 898 aaKnown RBP12.55□□□□□ -0.4
SHANK2-219ENST00000606715 ESYT1Q9BSJ8 1104 aa12.55□□□□□ -0.4
SHANK2-219ENST00000606715 NIM1KQ8IY84 436 aa12.55□□□□□ -0.4
SHANK2-219ENST00000606715 CPLX3Q8WVH0 158 aa12.55□□□□□ -0.4
SHANK2-219ENST00000606715 CCDC102AQ96A19 550 aa12.55□□□□□ -0.4
SHANK2-219ENST00000606715 BCS1LQ9Y276 419 aa12.55□□□□□ -0.4
SHANK2-219ENST00000606715 THRAP3Q9Y2W1 955 aaKnown RBP12.55□□□□□ -0.4
SHANK2-219ENST00000606715 MRVI1Q9Y6F6 885 aa12.55□□□□□ -0.4
SHANK2-219ENST00000606715 IKBKGQ9Y6K9 419 aa12.55□□□□□ -0.4
SHANK2-219ENST00000606715 PPM1EQ8WY54 764 aa12.54□□□□□ -0.4
SHANK2-219ENST00000606715 ALS2CR12Q96Q35 445 aa12.54□□□□□ -0.4
SHANK2-219ENST00000606715 RIMBP3CA6NJZ7 1639 aa12.54□□□□□ -0.4
SHANK2-219ENST00000606715 RIMBP3BA6NNM3 1639 aa12.54□□□□□ -0.4
SHANK2-219ENST00000606715 RIMBP3Q9UFD9 1639 aa12.54□□□□□ -0.4
SHANK2-219ENST00000606715 FSD2A1L4K1 749 aa12.54□□□□□ -0.4
SHANK2-219ENST00000606715 RTN1Q16799 776 aa12.54□□□□□ -0.4
SHANK2-219ENST00000606715 ZBTB40Q9NUA8 1239 aa12.54□□□□□ -0.4
SHANK2-219ENST00000606715 GGA1Q9UJY5 639 aa12.54□□□□□ -0.4
SHANK2-219ENST00000606715 ANKARQ7Z5J8 1434 aa12.54□□□□□ -0.4
SHANK2-219ENST00000606715 NDC80O14777 642 aa12.54□□□□□ -0.4
SHANK2-219ENST00000606715 CAVIN2O95810 425 aa12.54□□□□□ -0.4
SHANK2-219ENST00000606715 SFPQP23246 707 aaKnown RBP eCLIP12.54□□□□□ -0.4
SHANK2-219ENST00000606715 KLF18A0A0U1RQI7 1052 aa12.54□□□□□ -0.4
SHANK2-219ENST00000606715 ZSCAN12O43309 604 aa12.54□□□□□ -0.4
SHANK2-219ENST00000606715 CALML3P27482 149 aa12.54□□□□□ -0.4
SHANK2-219ENST00000606715 CCDC183Q5T5S1 534 aa12.54□□□□□ -0.4
SHANK2-219ENST00000606715 WDR66Q8TBY9 1149 aa12.54□□□□□ -0.4
SHANK2-219ENST00000606715 HELLSQ9NRZ9 838 aa12.54□□□□□ -0.4
SHANK2-219ENST00000606715 RBM8AQ9Y5S9 174 aaKnown RBP12.54□□□□□ -0.4
SHANK2-219ENST00000606715 CARD10Q9BWT7 1032 aa12.53□□□□□ -0.4
SHANK2-219ENST00000606715 BICC1Q9H694 974 aaKnown RBP12.53□□□□□ -0.4
SHANK2-219ENST00000606715 JAG2Q9Y219 1238 aa12.53□□□□□ -0.4
SHANK2-219ENST00000606715 KDM5AP29375 1690 aaKnown RBP12.53□□□□□ -0.4
SHANK2-219ENST00000606715 ADCY10Q96PN6 1610 aa12.53□□□□□ -0.4
SHANK2-219ENST00000606715 H7C1D1 291 aa12.53□□□□□ -0.4
SHANK2-219ENST00000606715 IGHDP01880 384 aa12.53□□□□□ -0.4
SHANK2-219ENST00000606715 CRACR2AQ9BSW2 395 aa12.53□□□□□ -0.4
SHANK2-219ENST00000606715 AOX1Q06278 1338 aa12.53□□□□□ -0.4
SHANK2-219ENST00000606715 HIBADHP31937 336 aaKnown RBP12.53□□□□□ -0.4
SHANK2-219ENST00000606715 DPP8Q6V1X1 898 aaPredicted RBP12.53□□□□□ -0.4
SHANK2-219ENST00000606715 MSANTD4Q8NCY6 345 aa12.53□□□□□ -0.4
SHANK2-219ENST00000606715 SMCR8Q8TEV9 937 aaPredicted RBP12.53□□□□□ -0.4
SHANK2-219ENST00000606715 SREK1Q8WXA9 508 aaKnown RBP12.53□□□□□ -0.4
SHANK2-219ENST00000606715 DDX17Q92841 729 aaKnown RBP12.53□□□□□ -0.4
SHANK2-219ENST00000606715 SPC25Q9HBM1 224 aa12.53□□□□□ -0.4
SHANK2-219ENST00000606715 ZNF335Q9H4Z2 1342 aaPredicted RBP12.53□□□□□ -0.4
SHANK2-219ENST00000606715 M0QZ92 97 aa12.53□□□□□ -0.4
SHANK2-219ENST00000606715 FAM13AO94988 1023 aa12.53□□□□□ -0.4
SHANK2-219ENST00000606715 ITGA6P23229 1130 aa12.53□□□□□ -0.4
SHANK2-219ENST00000606715 ARHGAP27Q6ZUM4 889 aa12.53□□□□□ -0.4
SHANK2-219ENST00000606715 RAB3IL1Q8TBN0 382 aa12.53□□□□□ -0.4
SHANK2-219ENST00000606715 TET3O43151 1660 aa12.53□□□□□ -0.4
SHANK2-219ENST00000606715 SLU7O95391 586 aaKnown RBP12.53□□□□□ -0.4
SHANK2-219ENST00000606715 TFCP2Q12800 502 aa12.53□□□□□ -0.4
SHANK2-219ENST00000606715 ARHGEF10LQ9HCE6 1279 aa12.53□□□□□ -0.4
SHANK2-219ENST00000606715 NOP56O00567 594 aaKnown RBP12.52□□□□□ -0.4
SHANK2-219ENST00000606715 GJB2P29033 226 aa12.52□□□□□ -0.4
SHANK2-219ENST00000606715 ARHGEF6Q15052 776 aa12.52□□□□□ -0.4
SHANK2-219ENST00000606715 FSIP1Q8NA03 581 aa12.52□□□□□ -0.4
SHANK2-219ENST00000606715 PPP1R14CQ8TAE6 165 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms