RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 C1orf115Q9H7X2 142 aa7.44□□□□□ -1.22
LSM1P2-201ENST00000604911 SH3BP1Q9Y3L3 701 aa7.44□□□□□ -1.22
LSM1P2-201ENST00000604911 RIPOR2Q9Y4F9 1068 aa7.44□□□□□ -1.22
LSM1P2-201ENST00000604911 MYO15BQ96JP2 1530 aa7.43□□□□□ -1.22
LSM1P2-201ENST00000604911 WISP1O95388 367 aa7.43□□□□□ -1.22
LSM1P2-201ENST00000604911 ATP11AP98196 1134 aa7.43□□□□□ -1.22
LSM1P2-201ENST00000604911 TMCO4Q5TGY1 634 aa7.43□□□□□ -1.22
LSM1P2-201ENST00000604911 KRTAP19-1Q8IUB9 90 aa7.43□□□□□ -1.22
LSM1P2-201ENST00000604911 OTUD6BQ8N6M0 293 aa7.43□□□□□ -1.22
LSM1P2-201ENST00000604911 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.43□□□□□ -1.22
LSM1P2-201ENST00000604911 FAM13BQ9NYF5 915 aa7.43□□□□□ -1.22
LSM1P2-201ENST00000604911 RAXQ9Y2V3 346 aa7.43□□□□□ -1.22
LSM1P2-201ENST00000604911 CADPSQ9ULU8 1353 aa7.43□□□□□ -1.22
LSM1P2-201ENST00000604911 LINC01387J3KSC0 135 aa7.42□□□□□ -1.22
LSM1P2-201ENST00000604911 KIF20AO95235 890 aa7.42□□□□□ -1.22
LSM1P2-201ENST00000604911 GLB1P16278 677 aa7.42□□□□□ -1.22
LSM1P2-201ENST00000604911 ZAP70P43403 619 aa7.42□□□□□ -1.22
LSM1P2-201ENST00000604911 HYAL2Q12891 473 aa7.42□□□□□ -1.22
LSM1P2-201ENST00000604911 FAM9BQ8IZU0 186 aa7.42□□□□□ -1.22
LSM1P2-201ENST00000604911 ARMC10Q8N2F6 343 aa7.42□□□□□ -1.22
LSM1P2-201ENST00000604911 SLC52A1Q9NWF4 448 aa7.42□□□□□ -1.22
LSM1P2-201ENST00000604911 GEMIN8Q9NWZ8 242 aaKnown RBP7.42□□□□□ -1.22
LSM1P2-201ENST00000604911 GOLGA6L3A6NEY3 463 aa7.41□□□□□ -1.22
LSM1P2-201ENST00000604911 ZBTB39O15060 712 aa7.41□□□□□ -1.22
LSM1P2-201ENST00000604911 PTCD1O75127 700 aaKnown RBP7.41□□□□□ -1.22
LSM1P2-201ENST00000604911 ERCC3P19447 782 aa7.41□□□□□ -1.22
LSM1P2-201ENST00000604911 CD68P34810 354 aaPredicted RBP7.41□□□□□ -1.22
LSM1P2-201ENST00000604911 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.41□□□□□ -1.22
LSM1P2-201ENST00000604911 MKL1Q969V6 931 aa7.41□□□□□ -1.22
LSM1P2-201ENST00000604911 MKNK1Q9BUB5 465 aa7.41□□□□□ -1.22
LSM1P2-201ENST00000604911 PCMTD2Q9NV79 361 aa7.41□□□□□ -1.22
LSM1P2-201ENST00000604911 BSDC1Q9NW68 430 aaPredicted RBP7.41□□□□□ -1.22
LSM1P2-201ENST00000604911 TERF2IPQ9NYB0 399 aa7.41□□□□□ -1.22
LSM1P2-201ENST00000604911 KCNK4Q9NYG8 393 aa7.41□□□□□ -1.22
LSM1P2-201ENST00000604911 KIAA1324LA8MWY0 1029 aaPredicted RBP7.4□□□□□ -1.22
LSM1P2-201ENST00000604911 HMGB1P1B2RPK0 211 aaPredicted RBP7.4□□□□□ -1.22
LSM1P2-201ENST00000604911 GOLIM4O00461 696 aa7.4□□□□□ -1.22
LSM1P2-201ENST00000604911 GSC2O15499 205 aa7.4□□□□□ -1.22
LSM1P2-201ENST00000604911 ATG7O95352 703 aa7.4□□□□□ -1.22
LSM1P2-201ENST00000604911 MED26O95402 600 aa7.4□□□□□ -1.22
LSM1P2-201ENST00000604911 IGLV1-40P01703 118 aa7.4□□□□□ -1.22
LSM1P2-201ENST00000604911 TPM2P07951 284 aa7.4□□□□□ -1.22
LSM1P2-201ENST00000604911 SSTR4P31391 388 aa7.4□□□□□ -1.22
LSM1P2-201ENST00000604911 SSR1P43307 286 aaKnown RBP7.4□□□□□ -1.22
LSM1P2-201ENST00000604911 NAA30Q147X3 362 aaPredicted RBP7.4□□□□□ -1.22
LSM1P2-201ENST00000604911 CEP135Q66GS9 1140 aa7.4□□□□□ -1.22
LSM1P2-201ENST00000604911 MCTP1Q6DN14 999 aa7.4□□□□□ -1.22
LSM1P2-201ENST00000604911 TXNDC11Q6PKC3 985 aa7.4□□□□□ -1.22
LSM1P2-201ENST00000604911 RASSF4Q9H2L5 321 aa7.4□□□□□ -1.22
LSM1P2-201ENST00000604911 MYH16Q9H6N6 1097 aa7.4□□□□□ -1.22
LSM1P2-201ENST00000604911 ABI2Q9NYB9 513 aaPredicted RBP7.4□□□□□ -1.22
LSM1P2-201ENST00000604911 STIM2Q9P246 746 aa7.4□□□□□ -1.22
LSM1P2-201ENST00000604911 FNDC3AQ9Y2H6 1198 aaKnown RBP7.4□□□□□ -1.22
LSM1P2-201ENST00000604911 SMNDC1O75940 238 aaKnown RBP eCLIP7.39□□□□□ -1.23
LSM1P2-201ENST00000604911 CDC27P30260 824 aa7.39□□□□□ -1.23
LSM1P2-201ENST00000604911 MFAP1P55081 439 aaKnown RBP7.39□□□□□ -1.23
LSM1P2-201ENST00000604911 HDAC1Q13547 482 aaPredicted RBP7.39□□□□□ -1.23
LSM1P2-201ENST00000604911 MYBPC2Q14324 1141 aa7.39□□□□□ -1.23
LSM1P2-201ENST00000604911 TMEM164Q5U3C3 297 aa7.39□□□□□ -1.23
LSM1P2-201ENST00000604911 KIAA1211Q6ZU35 1233 aa7.39□□□□□ -1.23
LSM1P2-201ENST00000604911 GPR152Q8TDT2 470 aa7.39□□□□□ -1.23
LSM1P2-201ENST00000604911 CLP1Q92989 425 aaKnown RBP7.39□□□□□ -1.23
LSM1P2-201ENST00000604911 FAM46AQ96IP4 442 aaKnown RBP7.39□□□□□ -1.23
LSM1P2-201ENST00000604911 SPACA7Q96KW9 195 aa7.39□□□□□ -1.23
LSM1P2-201ENST00000604911 PBX4Q9BYU1 374 aa7.39□□□□□ -1.23
LSM1P2-201ENST00000604911 LACRTQ9GZZ8 138 aa7.39□□□□□ -1.23
LSM1P2-201ENST00000604911 RAI14Q9P0K7 980 aa7.39□□□□□ -1.23
LSM1P2-201ENST00000604911 COL17A1Q9UMD9 1497 aaPredicted RBP7.38□□□□□ -1.23
LSM1P2-201ENST00000604911 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.38□□□□□ -1.23
LSM1P2-201ENST00000604911 FSCN2O14926 492 aa7.38□□□□□ -1.23
LSM1P2-201ENST00000604911 DHX15O43143 795 aaKnown RBP7.38□□□□□ -1.23
LSM1P2-201ENST00000604911 CYP2E1P05181 493 aaPredicted RBP7.38□□□□□ -1.23
LSM1P2-201ENST00000604911 EPHA1P21709 976 aa7.38□□□□□ -1.23
LSM1P2-201ENST00000604911 CCDC96Q2M329 555 aa7.38□□□□□ -1.23
LSM1P2-201ENST00000604911 UVSSAQ2YD98 709 aa7.38□□□□□ -1.23
LSM1P2-201ENST00000604911 TTC39BQ5VTQ0 682 aaPredicted RBP7.38□□□□□ -1.23
LSM1P2-201ENST00000604911 ACAD11Q709F0 780 aa7.38□□□□□ -1.23
LSM1P2-201ENST00000604911 NOL8Q76FK4 1167 aaKnown RBP7.38□□□□□ -1.23
LSM1P2-201ENST00000604911 MTERF4Q7Z6M4 381 aaKnown RBP7.38□□□□□ -1.23
LSM1P2-201ENST00000604911 KLHL23Q8NBE8 558 aa7.38□□□□□ -1.23
LSM1P2-201ENST00000604911 SGSM3Q96HU1 749 aa7.38□□□□□ -1.23
LSM1P2-201ENST00000604911 CEP41Q9BYV8 373 aa7.38□□□□□ -1.23
LSM1P2-201ENST00000604911 ADAM19Q9H013 955 aa7.38□□□□□ -1.23
LSM1P2-201ENST00000604911 SLAIN2Q9P270 581 aa7.38□□□□□ -1.23
LSM1P2-201ENST00000604911 STOML1Q9UBI4 398 aa7.38□□□□□ -1.23
LSM1P2-201ENST00000604911 FEZ2Q9UHY8 353 aaPredicted RBP7.38□□□□□ -1.23
LSM1P2-201ENST00000604911 ANP32CO43423 234 aa7.37□□□□□ -1.23
LSM1P2-201ENST00000604911 ADAM11O75078 769 aa7.37□□□□□ -1.23
LSM1P2-201ENST00000604911 TGFB1P01137 390 aa7.37□□□□□ -1.23
LSM1P2-201ENST00000604911 SCNN1AP37088 669 aa7.37□□□□□ -1.23
LSM1P2-201ENST00000604911 NBPF6Q5VWK0 638 aa7.37□□□□□ -1.23
LSM1P2-201ENST00000604911 NBPF5PQ86XG9 351 aaPredicted RBP7.37□□□□□ -1.23
LSM1P2-201ENST00000604911 ZDHHC13Q8IUH4 622 aa7.37□□□□□ -1.23
LSM1P2-201ENST00000604911 ANKRD13AQ8IZ07 590 aa7.37□□□□□ -1.23
LSM1P2-201ENST00000604911 NBPF4Q96M43 638 aa7.37□□□□□ -1.23
LSM1P2-201ENST00000604911 TSPAN18Q96SJ8 248 aa7.37□□□□□ -1.23
LSM1P2-201ENST00000604911 POP1Q99575 1024 aaKnown RBP7.37□□□□□ -1.23
LSM1P2-201ENST00000604911 RBM28Q9NW13 759 aaKnown RBP7.37□□□□□ -1.23
LSM1P2-201ENST00000604911 DNTTIP2Q5QJE6 756 aaKnown RBP7.36□□□□□ -1.23
LSM1P2-201ENST00000604911 PDE12Q6L8Q7 609 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms