RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 TAF1DQ9H5J8 278 aaPredicted RBP17.07■□□□□ 0.32
RNF40-212ENST00000602784 CNOT7Q9UIV1 285 aaKnown RBP17.07■□□□□ 0.32
RNF40-212ENST00000602784 ZBTB12Q9Y330 459 aaPredicted RBP17.07■□□□□ 0.32
RNF40-212ENST00000602784 PDS5AQ29RF7 1337 aaKnown RBP17.06■□□□□ 0.32
RNF40-212ENST00000602784 ZNF646O15015 1829 aaPredicted RBP17.06■□□□□ 0.32
RNF40-212ENST00000602784 IRX6P78412 446 aaPredicted RBP17.06■□□□□ 0.32
RNF40-212ENST00000602784 TBC1D22AQ8WUA7 517 aa17.06■□□□□ 0.32
RNF40-212ENST00000602784 LRRCC1Q9C099 1032 aa17.06■□□□□ 0.32
RNF40-212ENST00000602784 RWDD1Q9H446 243 aaPredicted RBP17.06■□□□□ 0.32
RNF40-212ENST00000602784 H7C1D1 291 aa17.05■□□□□ 0.32
RNF40-212ENST00000602784 USP17L8P0C7I0 530 aa17.05■□□□□ 0.32
RNF40-212ENST00000602784 EPHX2P34913 555 aa17.05■□□□□ 0.32
RNF40-212ENST00000602784 EPS15P42566 896 aa17.05■□□□□ 0.32
RNF40-212ENST00000602784 ZNF280AP59817 542 aaPredicted RBP17.05■□□□□ 0.32
RNF40-212ENST00000602784 PNMA8AQ86V59 439 aaPredicted RBP17.05■□□□□ 0.32
RNF40-212ENST00000602784 WDR66Q8TBY9 1149 aa17.05■□□□□ 0.32
RNF40-212ENST00000602784 FBXW7Q969H0 707 aa17.05■□□□□ 0.32
RNF40-212ENST00000602784 ZNF512BQ96KM6 892 aaPredicted RBP17.05■□□□□ 0.32
RNF40-212ENST00000602784 ADARB2Q9NS39 739 aaKnown RBP17.05■□□□□ 0.32
RNF40-212ENST00000602784 DENND2AQ9ULE3 1009 aa17.05■□□□□ 0.32
RNF40-212ENST00000602784 IQSEC3Q9UPP2 1182 aaPredicted RBP17.05■□□□□ 0.32
RNF40-212ENST00000602784 APBB1O00213 710 aa17.04■□□□□ 0.32
RNF40-212ENST00000602784 UQCRFS1P1P0C7P4 283 aa17.04■□□□□ 0.32
RNF40-212ENST00000602784 ARID4AP29374 1257 aaPredicted RBP17.04■□□□□ 0.32
RNF40-212ENST00000602784 CCDC158Q5M9N0 1113 aa17.04■□□□□ 0.32
RNF40-212ENST00000602784 MFSD14BQ5SR56 506 aa17.04■□□□□ 0.32
RNF40-212ENST00000602784 USP50Q70EL3 339 aaPredicted RBP17.04■□□□□ 0.32
RNF40-212ENST00000602784 AACSQ86V21 672 aa17.04■□□□□ 0.32
RNF40-212ENST00000602784 MICALL2Q8IY33 904 aa17.04■□□□□ 0.32
RNF40-212ENST00000602784 CERS5Q8N5B7 392 aa17.04■□□□□ 0.32
RNF40-212ENST00000602784 GCC1Q96CN9 775 aa17.04■□□□□ 0.32
RNF40-212ENST00000602784 DBNDD2Q9BQY9 259 aa17.04■□□□□ 0.32
RNF40-212ENST00000602784 IL1RAPL2Q9NP60 686 aa17.04■□□□□ 0.32
RNF40-212ENST00000602784 DBNLQ9UJU6 430 aaKnown RBP17.04■□□□□ 0.32
RNF40-212ENST00000602784 SUGT1Q9Y2Z0 365 aa17.04■□□□□ 0.32
RNF40-212ENST00000602784 C16orf71Q8IYS4 520 aaPredicted RBP17.03■□□□□ 0.32
RNF40-212ENST00000602784 OGFOD1Q8N543 542 aa17.03■□□□□ 0.32
RNF40-212ENST00000602784 MXD3Q9BW11 206 aa17.03■□□□□ 0.32
RNF40-212ENST00000602784 CCDC8Q9H0W5 538 aaPredicted RBP17.03■□□□□ 0.32
RNF40-212ENST00000602784 SALL1Q9NSC2 1324 aa17.02■□□□□ 0.32
RNF40-212ENST00000602784 TOMM70O94826 608 aa17.02■□□□□ 0.32
RNF40-212ENST00000602784 IFIT2P09913 472 aaKnown RBP17.02■□□□□ 0.32
RNF40-212ENST00000602784 CHAF1AQ13111 956 aaPredicted RBP17.02■□□□□ 0.32
RNF40-212ENST00000602784 RASGRF1Q13972 1273 aa17.02■□□□□ 0.32
RNF40-212ENST00000602784 TTC39AQ5SRH9 613 aa17.01■□□□□ 0.31
RNF40-212ENST00000602784 KIAA0825Q8IV33 1275 aa17.01■□□□□ 0.31
RNF40-212ENST00000602784 SMC5Q8IY18 1101 aa17.01■□□□□ 0.31
RNF40-212ENST00000602784 TLR7Q9NYK1 1049 aaKnown RBP17.01■□□□□ 0.31
RNF40-212ENST00000602784 HDAC9Q9UKV0 1011 aa17.01■□□□□ 0.31
RNF40-212ENST00000602784 JAG2Q9Y219 1238 aa17.01■□□□□ 0.31
RNF40-212ENST00000602784 COL1A1P02452 1464 aaPredicted RBP17■□□□□ 0.31
RNF40-212ENST00000602784 SHTN1A0MZ66 631 aa17■□□□□ 0.31
RNF40-212ENST00000602784 LDHDQ86WU2 507 aa17■□□□□ 0.31
RNF40-212ENST00000602784 ZGPATQ8N5A5 531 aaKnown RBP17■□□□□ 0.31
RNF40-212ENST00000602784 SPATA5Q8NB90 893 aa17■□□□□ 0.31
RNF40-212ENST00000602784 RBM46Q8TBY0 533 aaKnown RBP17■□□□□ 0.31
RNF40-212ENST00000602784 ZC3H15Q8WU90 426 aaKnown RBP17■□□□□ 0.31
RNF40-212ENST00000602784 MRIQ9BWK5 157 aa17■□□□□ 0.31
RNF40-212ENST00000602784 HMG20BQ9P0W2 317 aa17■□□□□ 0.31
RNF40-212ENST00000602784 MYH13Q9UKX3 1938 aa17■□□□□ 0.31
RNF40-212ENST00000602784 IGHDP01880 384 aa16.99■□□□□ 0.31
RNF40-212ENST00000602784 MCAMP43121 646 aa16.99■□□□□ 0.31
RNF40-212ENST00000602784 HDLBPQ00341 1268 aaKnown RBP16.99■□□□□ 0.31
RNF40-212ENST00000602784 SAMD7Q7Z3H4 446 aa16.99■□□□□ 0.31
RNF40-212ENST00000602784 MTMR14Q8NCE2 650 aa16.99■□□□□ 0.31
RNF40-212ENST00000602784 MYOZ2Q9NPC6 264 aa16.99■□□□□ 0.31
RNF40-212ENST00000602784 PGAP2Q9UHJ9 254 aa16.99■□□□□ 0.31
RNF40-212ENST00000602784 SMARCA5O60264 1052 aaPredicted RBP16.98■□□□□ 0.31
RNF40-212ENST00000602784 IGSF3O75054 1194 aa16.98■□□□□ 0.31
RNF40-212ENST00000602784 HIRAP54198 1017 aaPredicted RBP16.98■□□□□ 0.31
RNF40-212ENST00000602784 KIF4BQ2VIQ3 1234 aa16.98■□□□□ 0.31
RNF40-212ENST00000602784 EAPPQ56P03 285 aaPredicted RBP16.98■□□□□ 0.31
RNF40-212ENST00000602784 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.98■□□□□ 0.31
RNF40-212ENST00000602784 SERPINA10Q9UK55 444 aa16.98■□□□□ 0.31
RNF40-212ENST00000602784 MAST3O60307 1309 aa16.97■□□□□ 0.31
RNF40-212ENST00000602784 ADAMTSL1Q8N6G6 1762 aa16.97■□□□□ 0.31
RNF40-212ENST00000602784 NEFLP07196 543 aa16.97■□□□□ 0.31
RNF40-212ENST00000602784 FSTL1Q12841 308 aa16.97■□□□□ 0.31
RNF40-212ENST00000602784 SCARF1Q14162 830 aa16.97■□□□□ 0.31
RNF40-212ENST00000602784 TBC1D10BQ4KMP7 808 aaPredicted RBP16.97■□□□□ 0.31
RNF40-212ENST00000602784 ANKRD45Q5TZF3 282 aa16.97■□□□□ 0.31
RNF40-212ENST00000602784 SPTY2D1Q68D10 685 aaPredicted RBP16.97■□□□□ 0.31
RNF40-212ENST00000602784 SMC1BQ8NDV3 1235 aa16.97■□□□□ 0.31
RNF40-212ENST00000602784 TRPM4Q8TD43 1214 aa16.97■□□□□ 0.31
RNF40-212ENST00000602784 ZBED3Q96IU2 234 aaPredicted RBP16.97■□□□□ 0.31
RNF40-212ENST00000602784 ZBTB47Q9UFB7 747 aaPredicted RBP16.97■□□□□ 0.31
RNF40-212ENST00000602784 TTF2Q9UNY4 1162 aaKnown RBP16.97■□□□□ 0.31
RNF40-212ENST00000602784 EGFRP00533 1210 aa16.96■□□□□ 0.31
RNF40-212ENST00000602784 LDHBP07195 334 aaKnown RBP16.96■□□□□ 0.31
RNF40-212ENST00000602784 POTEIP0CG38 1075 aa16.96■□□□□ 0.31
RNF40-212ENST00000602784 POTEJP0CG39 1038 aa16.96■□□□□ 0.31
RNF40-212ENST00000602784 ATP5JP18859 108 aa16.96■□□□□ 0.31
RNF40-212ENST00000602784 GRIK5Q16478 980 aa16.96■□□□□ 0.31
RNF40-212ENST00000602784 CHADLQ6NUI6 762 aa16.96■□□□□ 0.31
RNF40-212ENST00000602784 AKAP11Q9UKA4 1901 aa16.96■□□□□ 0.3
RNF40-212ENST00000602784 F8W031 263 aaPredicted RBP16.95■□□□□ 0.3
RNF40-212ENST00000602784 DLGAP5Q15398 846 aa16.95■□□□□ 0.3
RNF40-212ENST00000602784 RBM26Q5T8P6 1007 aaKnown RBP16.95■□□□□ 0.3
RNF40-212ENST00000602784 PI16Q6UXB8 463 aa16.95■□□□□ 0.3
RNF40-212ENST00000602784 CLEC11AQ9Y240 323 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms