RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 HIP1O00291 1037 aa20.9■□□□□ 0.94
PPFIA3-207ENST00000602716 IDH1O75874 414 aaKnown RBP20.9■□□□□ 0.94
PPFIA3-207ENST00000602716 RBM25P49756 843 aaKnown RBP20.9■□□□□ 0.94
PPFIA3-207ENST00000602716 PTH1RQ03431 593 aa20.9■□□□□ 0.94
PPFIA3-207ENST00000602716 C7orf43Q8WVR3 580 aa20.9■□□□□ 0.94
PPFIA3-207ENST00000602716 IL27Q8NEV9 243 aa20.89■□□□□ 0.93
PPFIA3-207ENST00000602716 CNKSR1Q969H4 720 aa20.89■□□□□ 0.93
PPFIA3-207ENST00000602716 KIF2CQ99661 725 aa20.89■□□□□ 0.93
PPFIA3-207ENST00000602716 MAST3O60307 1309 aa20.89■□□□□ 0.93
PPFIA3-207ENST00000602716 DOCK2Q92608 1830 aa20.89■□□□□ 0.93
PPFIA3-207ENST00000602716 M0R2C6 588 aa20.88■□□□□ 0.93
PPFIA3-207ENST00000602716 RNF113AO15541 343 aaKnown RBP20.88■□□□□ 0.93
PPFIA3-207ENST00000602716 ZMYM1Q5SVZ6 1142 aa20.88■□□□□ 0.93
PPFIA3-207ENST00000602716 C15orf52Q6ZUT6 534 aaKnown RBP20.88■□□□□ 0.93
PPFIA3-207ENST00000602716 OSBP2Q969R2 916 aa20.88■□□□□ 0.93
PPFIA3-207ENST00000602716 RAD50Q92878 1312 aa20.88■□□□□ 0.93
PPFIA3-207ENST00000602716 CHAF1AQ13111 956 aaPredicted RBP20.88■□□□□ 0.93
PPFIA3-207ENST00000602716 DPP8Q6V1X1 898 aaPredicted RBP20.88■□□□□ 0.93
PPFIA3-207ENST00000602716 MPNDQ8N594 471 aa20.88■□□□□ 0.93
PPFIA3-207ENST00000602716 SLKQ9H2G2 1235 aaPredicted RBP20.88■□□□□ 0.93
PPFIA3-207ENST00000602716 GNL3LQ9NVN8 582 aaKnown RBP20.88■□□□□ 0.93
PPFIA3-207ENST00000602716 KLHL34Q8N239 644 aa20.87■□□□□ 0.93
PPFIA3-207ENST00000602716 RUFY2Q8WXA3 655 aa20.87■□□□□ 0.93
PPFIA3-207ENST00000602716 PPP1R1BQ9UD71 204 aaPredicted RBP20.87■□□□□ 0.93
PPFIA3-207ENST00000602716 PALD1Q9ULE6 856 aa20.87■□□□□ 0.93
PPFIA3-207ENST00000602716 RIMBP2O15034 1052 aa20.87■□□□□ 0.93
PPFIA3-207ENST00000602716 PDE6AP16499 860 aa20.87■□□□□ 0.93
PPFIA3-207ENST00000602716 CCDC171Q6TFL3 1326 aa20.86■□□□□ 0.93
PPFIA3-207ENST00000602716 C21orf2O43822 256 aa20.86■□□□□ 0.93
PPFIA3-207ENST00000602716 ADD2P35612 726 aa20.86■□□□□ 0.93
PPFIA3-207ENST00000602716 TTF1Q15361 905 aaPredicted RBP20.86■□□□□ 0.93
PPFIA3-207ENST00000602716 SLC9C2Q5TAH2 1124 aa20.86■□□□□ 0.93
PPFIA3-207ENST00000602716 DENND2AQ9ULE3 1009 aa20.86■□□□□ 0.93
PPFIA3-207ENST00000602716 TCRBV5S4A2TA0A5A2 114 aa20.85■□□□□ 0.93
PPFIA3-207ENST00000602716 ZNF804AQ7Z570 1209 aa20.85■□□□□ 0.93
PPFIA3-207ENST00000602716 PUS7LQ9H0K6 701 aaKnown RBP20.85■□□□□ 0.93
PPFIA3-207ENST00000602716 TDRD7Q8NHU6 1098 aaKnown RBP20.85■□□□□ 0.93
PPFIA3-207ENST00000602716 CD209Q9NNX6 404 aa20.85■□□□□ 0.93
PPFIA3-207ENST00000602716 ABCF2Q9UG63 623 aa20.85■□□□□ 0.93
PPFIA3-207ENST00000602716 ZNF532Q9HCE3 1301 aa20.84■□□□□ 0.93
PPFIA3-207ENST00000602716 WASHC4Q2M389 1173 aa20.84■□□□□ 0.93
PPFIA3-207ENST00000602716 MCMDC2Q4G0Z9 681 aa20.84■□□□□ 0.93
PPFIA3-207ENST00000602716 VPS53Q5VIR6 699 aa20.84■□□□□ 0.93
PPFIA3-207ENST00000602716 TTLL6Q8N841 843 aa20.84■□□□□ 0.93
PPFIA3-207ENST00000602716 ZNF384Q8TF68 577 aa20.84■□□□□ 0.93
PPFIA3-207ENST00000602716 MYH7P12883 1935 aa20.84■□□□□ 0.93
PPFIA3-207ENST00000602716 MYH13Q9UKX3 1938 aa20.83■□□□□ 0.93
PPFIA3-207ENST00000602716 SEMA3EO15041 775 aa20.83■□□□□ 0.93
PPFIA3-207ENST00000602716 MAGEB6Q8N7X4 407 aa20.83■□□□□ 0.93
PPFIA3-207ENST00000602716 APPBP2Q92624 585 aa20.83■□□□□ 0.93
PPFIA3-207ENST00000602716 GRIK5Q16478 980 aa20.83■□□□□ 0.92
PPFIA3-207ENST00000602716 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.83■□□□□ 0.92
PPFIA3-207ENST00000602716 HELLSQ9NRZ9 838 aa20.83■□□□□ 0.92
PPFIA3-207ENST00000602716 PDS5AQ29RF7 1337 aaKnown RBP20.82■□□□□ 0.92
PPFIA3-207ENST00000602716 FOXP2O15409 715 aa20.82■□□□□ 0.92
PPFIA3-207ENST00000602716 PRDX5P30044 214 aa20.82■□□□□ 0.92
PPFIA3-207ENST00000602716 ADGRA1Q86SQ6 560 aa20.82■□□□□ 0.92
PPFIA3-207ENST00000602716 LRP2BPQ9P2M1 347 aa20.82■□□□□ 0.92
PPFIA3-207ENST00000602716 ZFYP08048 801 aaPredicted RBP20.82■□□□□ 0.92
PPFIA3-207ENST00000602716 IL1R1P14778 569 aa20.82■□□□□ 0.92
PPFIA3-207ENST00000602716 DOK7Q18PE1 504 aa20.82■□□□□ 0.92
PPFIA3-207ENST00000602716 KIAA1211Q6ZU35 1233 aa20.82■□□□□ 0.92
PPFIA3-207ENST00000602716 TGFB2P61812 414 aa20.81■□□□□ 0.92
PPFIA3-207ENST00000602716 NLGN2Q8NFZ4 835 aa20.81■□□□□ 0.92
PPFIA3-207ENST00000602716 RBM8AQ9Y5S9 174 aaKnown RBP20.81■□□□□ 0.92
PPFIA3-207ENST00000602716 TAF6LQ9Y6J9 622 aa20.81■□□□□ 0.92
PPFIA3-207ENST00000602716 MAP3K12Q12852 859 aa20.8■□□□□ 0.92
PPFIA3-207ENST00000602716 UBE3CQ15386 1083 aa20.8■□□□□ 0.92
PPFIA3-207ENST00000602716 RASEFQ8IZ41 740 aa20.8■□□□□ 0.92
PPFIA3-207ENST00000602716 RAI14Q9P0K7 980 aa20.8■□□□□ 0.92
PPFIA3-207ENST00000602716 HSPA4P34932 840 aa20.8■□□□□ 0.92
PPFIA3-207ENST00000602716 TICAM2Q86XR7 235 aa20.8■□□□□ 0.92
PPFIA3-207ENST00000602716 MAP4K1Q92918 833 aa20.8■□□□□ 0.92
PPFIA3-207ENST00000602716 TMX4Q9H1E5 349 aaPredicted RBP20.8■□□□□ 0.92
PPFIA3-207ENST00000602716 BRPF3Q9ULD4 1205 aa20.8■□□□□ 0.92
PPFIA3-207ENST00000602716 BRCA1P38398 1863 aaKnown RBP20.8■□□□□ 0.92
PPFIA3-207ENST00000602716 GPAA1O43292 621 aa20.79■□□□□ 0.92
PPFIA3-207ENST00000602716 EIF5BO60841 1220 aaKnown RBP20.79■□□□□ 0.92
PPFIA3-207ENST00000602716 RTFDC1Q9BY42 306 aaPredicted RBP20.79■□□□□ 0.92
PPFIA3-207ENST00000602716 DBNDD1Q9H9R9 158 aa20.79■□□□□ 0.92
PPFIA3-207ENST00000602716 ZBTB22O15209 634 aa20.78■□□□□ 0.92
PPFIA3-207ENST00000602716 ZC3H12CQ9C0D7 883 aaKnown RBP20.78■□□□□ 0.92
PPFIA3-207ENST00000602716 COL4A5P29400 1685 aa20.78■□□□□ 0.92
PPFIA3-207ENST00000602716 LRRFIP1Q32MZ4 808 aaKnown RBP20.78■□□□□ 0.92
PPFIA3-207ENST00000602716 ZSCAN25Q6NSZ9 544 aa20.78■□□□□ 0.92
PPFIA3-207ENST00000602716 MIGA1Q8NAN2 632 aa20.78■□□□□ 0.92
PPFIA3-207ENST00000602716 PIM2Q9P1W9 311 aa20.78■□□□□ 0.92
PPFIA3-207ENST00000602716 CHD4Q14839 1912 aa20.78■□□□□ 0.92
PPFIA3-207ENST00000602716 MECOMQ03112 1051 aa20.77■□□□□ 0.92
PPFIA3-207ENST00000602716 AOC3Q16853 763 aa20.77■□□□□ 0.92
PPFIA3-207ENST00000602716 CCDC93Q567U6 631 aa20.77■□□□□ 0.92
PPFIA3-207ENST00000602716 COA1Q9GZY4 146 aa20.77■□□□□ 0.92
PPFIA3-207ENST00000602716 CD2APQ9Y5K6 639 aa20.77■□□□□ 0.92
PPFIA3-207ENST00000602716 MAST2Q6P0Q8 1798 aa20.77■□□□□ 0.92
PPFIA3-207ENST00000602716 MBD4O95243 580 aa20.77■□□□□ 0.91
PPFIA3-207ENST00000602716 CD2BP2O95400 341 aaKnown RBP20.77■□□□□ 0.91
PPFIA3-207ENST00000602716 HSPD1P10809 573 aaKnown RBP20.77■□□□□ 0.91
PPFIA3-207ENST00000602716 COL9A3Q14050 684 aaPredicted RBP20.77■□□□□ 0.91
PPFIA3-207ENST00000602716 NECTIN1Q15223 517 aa20.77■□□□□ 0.91
PPFIA3-207ENST00000602716 NSUN4Q96CB9 384 aaKnown RBP20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms