RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 TSPY3P0CV98 308 aa16.51■□□□□ 0.23
SYMPK-215ENST00000600237 TSPY8P0CW00 308 aa16.51■□□□□ 0.23
SYMPK-215ENST00000600237 NAA16Q6N069 864 aaPredicted RBP16.51■□□□□ 0.23
SYMPK-215ENST00000600237 RTL9Q8NET4 1388 aa16.51■□□□□ 0.23
SYMPK-215ENST00000600237 DDX12PQ92771 950 aa16.51■□□□□ 0.23
SYMPK-215ENST00000600237 KIAA0753Q2KHM9 967 aa16.5■□□□□ 0.23
SYMPK-215ENST00000600237 FEZ1Q99689 392 aa16.5■□□□□ 0.23
SYMPK-215ENST00000600237 SBNO1A3KN83 1393 aa16.5■□□□□ 0.23
SYMPK-215ENST00000600237 TMEM2Q9UHN6 1383 aa16.5■□□□□ 0.23
SYMPK-215ENST00000600237 FSD2A1L4K1 749 aa16.5■□□□□ 0.23
SYMPK-215ENST00000600237 KRT86O43790 486 aa16.5■□□□□ 0.23
SYMPK-215ENST00000600237 CTAGE9A4FU28 777 aa16.5■□□□□ 0.23
SYMPK-215ENST00000600237 TFCP2L1Q9NZI6 479 aa16.5■□□□□ 0.23
SYMPK-215ENST00000600237 SCLT1Q96NL6 688 aa16.5■□□□□ 0.23
SYMPK-215ENST00000600237 USP37Q86T82 979 aa16.49■□□□□ 0.23
SYMPK-215ENST00000600237 GOLGA1Q92805 767 aa16.49■□□□□ 0.23
SYMPK-215ENST00000600237 AOX1Q06278 1338 aa16.49■□□□□ 0.23
SYMPK-215ENST00000600237 IVLP07476 585 aa16.49■□□□□ 0.23
SYMPK-215ENST00000600237 TIGD1Q96MW7 591 aa16.49■□□□□ 0.23
SYMPK-215ENST00000600237 LIG1P18858 919 aa16.49■□□□□ 0.23
SYMPK-215ENST00000600237 PRPHP41219 470 aa16.49■□□□□ 0.23
SYMPK-215ENST00000600237 ASIC1P78348 528 aa16.49■□□□□ 0.23
SYMPK-215ENST00000600237 TBC1D5Q92609 795 aa16.49■□□□□ 0.23
SYMPK-215ENST00000600237 ZFYVE16Q7Z3T8 1539 aa16.49■□□□□ 0.23
SYMPK-215ENST00000600237 KIF5AQ12840 1032 aa16.49■□□□□ 0.23
SYMPK-215ENST00000600237 CCDC174Q6PII3 467 aa16.49■□□□□ 0.23
SYMPK-215ENST00000600237 SELENOOQ9BVL4 669 aa16.49■□□□□ 0.23
SYMPK-215ENST00000600237 APOBRQ0VD83 1088 aa16.48■□□□□ 0.23
SYMPK-215ENST00000600237 KRT24Q2M2I5 525 aa16.48■□□□□ 0.23
SYMPK-215ENST00000600237 DHX58Q96C10 678 aa16.48■□□□□ 0.23
SYMPK-215ENST00000600237 HSP90AA4PQ58FG1 418 aa16.48■□□□□ 0.23
SYMPK-215ENST00000600237 DDX21Q9NR30 783 aaKnown RBP eCLIP16.48■□□□□ 0.23
SYMPK-215ENST00000600237 KDM2BQ8NHM5 1336 aa16.48■□□□□ 0.23
SYMPK-215ENST00000600237 HOXB7P09629 217 aa16.48■□□□□ 0.23
SYMPK-215ENST00000600237 CWF19L2Q2TBE0 894 aaKnown RBP16.48■□□□□ 0.23
SYMPK-215ENST00000600237 PTGS1P23219 599 aa16.48■□□□□ 0.23
SYMPK-215ENST00000600237 HDAC9Q9UKV0 1011 aa16.48■□□□□ 0.23
SYMPK-215ENST00000600237 BICDL2A1A5D9 508 aa16.47■□□□□ 0.23
SYMPK-215ENST00000600237 MCM6Q14566 821 aa16.47■□□□□ 0.23
SYMPK-215ENST00000600237 NBPF14Q5TI25 921 aa16.47■□□□□ 0.23
SYMPK-215ENST00000600237 WDR78Q5VTH9 848 aa16.47■□□□□ 0.23
SYMPK-215ENST00000600237 DHX37Q8IY37 1157 aaKnown RBP16.47■□□□□ 0.23
SYMPK-215ENST00000600237 CCDC155Q8N6L0 562 aa16.47■□□□□ 0.23
SYMPK-215ENST00000600237 IRS4O14654 1257 aaPredicted RBP16.47■□□□□ 0.23
SYMPK-215ENST00000600237 C6orf50Q9HD87 102 aa16.47■□□□□ 0.23
SYMPK-215ENST00000600237 HELLSQ9NRZ9 838 aa16.47■□□□□ 0.23
SYMPK-215ENST00000600237 ARHGEF10O15013 1369 aa16.47■□□□□ 0.23
SYMPK-215ENST00000600237 SAMD9Q5K651 1589 aa16.47■□□□□ 0.23
SYMPK-215ENST00000600237 OPA1O60313 960 aa16.47■□□□□ 0.23
SYMPK-215ENST00000600237 FAM160A1Q05DH4 1040 aa16.47■□□□□ 0.23
SYMPK-215ENST00000600237 HEATR3Q7Z4Q2 680 aa16.47■□□□□ 0.23
SYMPK-215ENST00000600237 PARP3Q9Y6F1 533 aa16.47■□□□□ 0.23
SYMPK-215ENST00000600237 ZNF804AQ7Z570 1209 aa16.47■□□□□ 0.23
SYMPK-215ENST00000600237 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.47■□□□□ 0.23
SYMPK-215ENST00000600237 CCDC42Q96M95 316 aa16.46■□□□□ 0.23
SYMPK-215ENST00000600237 IFNKQ9P0W0 207 aa16.46■□□□□ 0.23
SYMPK-215ENST00000600237 NAPAP54920 295 aa16.46■□□□□ 0.23
SYMPK-215ENST00000600237 MYL5Q02045 173 aa16.46■□□□□ 0.23
SYMPK-215ENST00000600237 IQUBQ8NA54 791 aa16.46■□□□□ 0.23
SYMPK-215ENST00000600237 TRERF1Q96PN7 1200 aa16.46■□□□□ 0.23
SYMPK-215ENST00000600237 SLAIN2Q9P270 581 aa16.46■□□□□ 0.23
SYMPK-215ENST00000600237 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.46■□□□□ 0.23
SYMPK-215ENST00000600237 ZMYM4Q5VZL5 1548 aa16.46■□□□□ 0.22
SYMPK-215ENST00000600237 RNF123Q5XPI4 1314 aa16.46■□□□□ 0.22
SYMPK-215ENST00000600237 ACTN2P35609 894 aa16.46■□□□□ 0.22
SYMPK-215ENST00000600237 OGFOD1Q8N543 542 aa16.46■□□□□ 0.22
SYMPK-215ENST00000600237 RNF216Q9NWF9 866 aaPredicted RBP16.46■□□□□ 0.22
SYMPK-215ENST00000600237 SAMM50Q9Y512 469 aa16.46■□□□□ 0.22
SYMPK-215ENST00000600237 MAGEB6P1A0A0J9YX57 407 aa16.45■□□□□ 0.22
SYMPK-215ENST00000600237 KRT2P35908 639 aa16.45■□□□□ 0.22
SYMPK-215ENST00000600237 TFCP2Q12800 502 aa16.45■□□□□ 0.22
SYMPK-215ENST00000600237 LMBR1Q8WVP7 490 aa16.45■□□□□ 0.22
SYMPK-215ENST00000600237 ZHX1Q9UKY1 873 aaPredicted RBP16.45■□□□□ 0.22
SYMPK-215ENST00000600237 STAMBPO95630 424 aa16.45■□□□□ 0.22
SYMPK-215ENST00000600237 UBE4AQ14139 1066 aa16.45■□□□□ 0.22
SYMPK-215ENST00000600237 POLD1P28340 1107 aa16.45■□□□□ 0.22
SYMPK-215ENST00000600237 IL13P35225 146 aa16.45■□□□□ 0.22
SYMPK-215ENST00000600237 KRT79Q5XKE5 535 aa16.45■□□□□ 0.22
SYMPK-215ENST00000600237 CNGA4Q8IV77 575 aa16.45■□□□□ 0.22
SYMPK-215ENST00000600237 LLPHQ9BRT6 129 aaKnown RBP16.45■□□□□ 0.22
SYMPK-215ENST00000600237 IQSEC3Q9UPP2 1182 aaPredicted RBP16.45■□□□□ 0.22
SYMPK-215ENST00000600237 ELP1O95163 1332 aa16.45■□□□□ 0.22
SYMPK-215ENST00000600237 KRT13P13646 458 aa16.45■□□□□ 0.22
SYMPK-215ENST00000600237 ZC3H12CQ9C0D7 883 aaKnown RBP16.44■□□□□ 0.22
SYMPK-215ENST00000600237 MMRN2Q9H8L6 949 aa16.44■□□□□ 0.22
SYMPK-215ENST00000600237 ZNF790Q6PG37 636 aa16.44■□□□□ 0.22
SYMPK-215ENST00000600237 FERMT2Q96AC1 680 aa16.44■□□□□ 0.22
SYMPK-215ENST00000600237 PLEKHG3A1L390 1219 aa16.44■□□□□ 0.22
SYMPK-215ENST00000600237 RPS6KB1P23443 525 aa16.44■□□□□ 0.22
SYMPK-215ENST00000600237 RASAL2Q9UJF2 1139 aa16.44■□□□□ 0.22
SYMPK-215ENST00000600237 GNA11P29992 359 aa16.43■□□□□ 0.22
SYMPK-215ENST00000600237 TRAPPC3LQ5T215 181 aa16.43■□□□□ 0.22
SYMPK-215ENST00000600237 PLCG2P16885 1265 aa16.43■□□□□ 0.22
SYMPK-215ENST00000600237 FERMT1Q9BQL6 677 aa16.43■□□□□ 0.22
SYMPK-215ENST00000600237 BICC1Q9H694 974 aaKnown RBP16.43■□□□□ 0.22
SYMPK-215ENST00000600237 LUC7L2Q9Y383 392 aaKnown RBP16.43■□□□□ 0.22
SYMPK-215ENST00000600237 GNPATO15228 680 aa16.43■□□□□ 0.22
SYMPK-215ENST00000600237 ZNF445P59923 1031 aa16.43■□□□□ 0.22
SYMPK-215ENST00000600237 RILPL1Q5EBL4 403 aa16.43■□□□□ 0.22
SYMPK-215ENST00000600237 PAXIP1Q6ZW49 1069 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms