RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 MED23Q9ULK4 1368 aa23.27■■□□□ 1.31
CCDC9-205ENST00000600117 KCNJ4P48050 445 aa23.26■■□□□ 1.31
CCDC9-205ENST00000600117 KIAA2012Q0VF49 1180 aa23.26■■□□□ 1.31
CCDC9-205ENST00000600117 PUM3Q15397 648 aaKnown RBP23.26■■□□□ 1.31
CCDC9-205ENST00000600117 C15orf52Q6ZUT6 534 aaKnown RBP23.26■■□□□ 1.31
CCDC9-205ENST00000600117 ERC1Q8IUD2 1116 aa23.26■■□□□ 1.31
CCDC9-205ENST00000600117 EYA3Q99504 573 aa23.26■■□□□ 1.31
CCDC9-205ENST00000600117 VPS33BQ9H267 617 aa23.26■■□□□ 1.31
CCDC9-205ENST00000600117 RWDD1Q9H446 243 aaPredicted RBP23.26■■□□□ 1.31
CCDC9-205ENST00000600117 ZNF609O15014 1411 aa23.25■■□□□ 1.31
CCDC9-205ENST00000600117 PPIP5K2O43314 1243 aa23.25■■□□□ 1.31
CCDC9-205ENST00000600117 DGKZQ13574 1117 aa23.25■■□□□ 1.31
CCDC9-205ENST00000600117 ATP2B3Q16720 1220 aa23.25■■□□□ 1.31
CCDC9-205ENST00000600117 AOC3Q16853 763 aa23.25■■□□□ 1.31
CCDC9-205ENST00000600117 TXNRD3Q86VQ6 643 aa23.25■■□□□ 1.31
CCDC9-205ENST00000600117 RHPN1Q8TCX5 695 aa23.25■■□□□ 1.31
CCDC9-205ENST00000600117 ARAP2Q8WZ64 1704 aa23.25■■□□□ 1.31
CCDC9-205ENST00000600117 WASHC4Q2M389 1173 aa23.24■■□□□ 1.31
CCDC9-205ENST00000600117 KIF1BPQ96EK5 621 aa23.24■■□□□ 1.31
CCDC9-205ENST00000600117 GPR108Q9NPR9 543 aa23.24■■□□□ 1.31
CCDC9-205ENST00000600117 PGAP2Q9UHJ9 254 aa23.24■■□□□ 1.31
CCDC9-205ENST00000600117 APBB1O00213 710 aa23.23■■□□□ 1.31
CCDC9-205ENST00000600117 RIMBP2O15034 1052 aa23.23■■□□□ 1.31
CCDC9-205ENST00000600117 LPIN2Q92539 896 aa23.23■■□□□ 1.31
CCDC9-205ENST00000600117 GLIS2Q9BZE0 524 aaPredicted RBP23.23■■□□□ 1.31
CCDC9-205ENST00000600117 AKAP2Q9Y2D5 859 aa23.23■■□□□ 1.31
CCDC9-205ENST00000600117 CXCL9Q07325 125 aa23.22■■□□□ 1.31
CCDC9-205ENST00000600117 TNNI3KQ59H18 835 aa23.22■■□□□ 1.31
CCDC9-205ENST00000600117 ERICH6BQ5W0A0 696 aa23.22■■□□□ 1.31
CCDC9-205ENST00000600117 CIAPIN1Q6FI81 312 aa23.22■■□□□ 1.31
CCDC9-205ENST00000600117 SMC5Q8IY18 1101 aa23.22■■□□□ 1.31
CCDC9-205ENST00000600117 ZC3H12CQ9C0D7 883 aaKnown RBP23.22■■□□□ 1.31
CCDC9-205ENST00000600117 ZNRF3Q9ULT6 936 aa23.22■■□□□ 1.31
CCDC9-205ENST00000600117 FPGT-TNNI3KV9GXZ4 949 aa23.22■■□□□ 1.31
CCDC9-205ENST00000600117 A0A1B0GUL7 405 aa23.21■■□□□ 1.31
CCDC9-205ENST00000600117 IFIT1P09914 478 aaKnown RBP23.21■■□□□ 1.31
CCDC9-205ENST00000600117 SLC5A1P13866 664 aa23.21■■□□□ 1.31
CCDC9-205ENST00000600117 TIMM10P62072 90 aa23.21■■□□□ 1.31
CCDC9-205ENST00000600117 ZC3H15Q8WU90 426 aaKnown RBP23.21■■□□□ 1.31
CCDC9-205ENST00000600117 GCC1Q96CN9 775 aa23.21■■□□□ 1.31
CCDC9-205ENST00000600117 IL1RAPL2Q9NP60 686 aa23.21■■□□□ 1.31
CCDC9-205ENST00000600117 ADORA1P30542 326 aa23.2■■□□□ 1.3
CCDC9-205ENST00000600117 GMPSP49915 693 aaPredicted RBP23.2■■□□□ 1.3
CCDC9-205ENST00000600117 NOGQ13253 232 aa23.2■■□□□ 1.3
CCDC9-205ENST00000600117 EAF2Q96CJ1 260 aaPredicted RBP23.2■■□□□ 1.3
CCDC9-205ENST00000600117 FAM84BQ96KN1 310 aaPredicted RBP23.2■■□□□ 1.3
CCDC9-205ENST00000600117 LRRCC1Q9C099 1032 aa23.2■■□□□ 1.3
CCDC9-205ENST00000600117 FBXO33Q7Z6M2 555 aa23.19■■□□□ 1.3
CCDC9-205ENST00000600117 SMARCA5O60264 1052 aaPredicted RBP23.18■■□□□ 1.3
CCDC9-205ENST00000600117 GYG1P46976 350 aa23.18■■□□□ 1.3
CCDC9-205ENST00000600117 DOK7Q18PE1 504 aa23.18■■□□□ 1.3
CCDC9-205ENST00000600117 CDC37L1Q7L3B6 337 aa23.18■■□□□ 1.3
CCDC9-205ENST00000600117 ZNF408Q9H9D4 720 aa23.18■■□□□ 1.3
CCDC9-205ENST00000600117 XAGE2Q96GT9 111 aa23.17■■□□□ 1.3
CCDC9-205ENST00000600117 COA1Q9GZY4 146 aa23.17■■□□□ 1.3
CCDC9-205ENST00000600117 DBNDD1Q9H9R9 158 aa23.17■■□□□ 1.3
CCDC9-205ENST00000600117 YDJCA8MPS7 323 aa23.16■■□□□ 1.3
CCDC9-205ENST00000600117 ECE2O60344 883 aa23.16■■□□□ 1.3
CCDC9-205ENST00000600117 HIRAP54198 1017 aaPredicted RBP23.16■■□□□ 1.3
CCDC9-205ENST00000600117 AACSQ86V21 672 aa23.16■■□□□ 1.3
CCDC9-205ENST00000600117 CLASRPQ8N2M8 674 aaKnown RBP23.16■■□□□ 1.3
CCDC9-205ENST00000600117 NEUROD6Q96NK8 337 aa23.16■■□□□ 1.3
CCDC9-205ENST00000600117 DBNDD2Q9BQY9 259 aa23.16■■□□□ 1.3
CCDC9-205ENST00000600117 CD209Q9NNX6 404 aa23.16■■□□□ 1.3
CCDC9-205ENST00000600117 TLR7Q9NYK1 1049 aaKnown RBP23.16■■□□□ 1.3
CCDC9-205ENST00000600117 SCN9AQ15858 1988 aa23.16■■□□□ 1.3
CCDC9-205ENST00000600117 HIBADHP31937 336 aaKnown RBP23.15■■□□□ 1.3
CCDC9-205ENST00000600117 BCAMP50895 628 aa23.15■■□□□ 1.3
CCDC9-205ENST00000600117 ZNF804AQ7Z570 1209 aa23.15■■□□□ 1.3
CCDC9-205ENST00000600117 CCDC8Q9H0W5 538 aaPredicted RBP23.15■■□□□ 1.3
CCDC9-205ENST00000600117 DBNLQ9UJU6 430 aaKnown RBP23.15■■□□□ 1.3
CCDC9-205ENST00000600117 IL1R1P14778 569 aa23.14■■□□□ 1.29
CCDC9-205ENST00000600117 HUNKP57058 714 aa23.14■■□□□ 1.29
CCDC9-205ENST00000600117 TNIP1Q15025 636 aa23.14■■□□□ 1.29
CCDC9-205ENST00000600117 CAVIN4Q5BKX8 364 aa23.14■■□□□ 1.29
CCDC9-205ENST00000600117 ANKRD45Q5TZF3 282 aa23.14■■□□□ 1.29
CCDC9-205ENST00000600117 ZIC5Q96T25 663 aa23.14■■□□□ 1.29
CCDC9-205ENST00000600117 ZNF646O15015 1829 aaPredicted RBP23.13■■□□□ 1.29
CCDC9-205ENST00000600117 PHKA1P46020 1223 aa23.13■■□□□ 1.29
CCDC9-205ENST00000600117 CCDC102BQ68D86 513 aa23.13■■□□□ 1.29
CCDC9-205ENST00000600117 PODNQ7Z5L7 613 aa23.13■■□□□ 1.29
CCDC9-205ENST00000600117 TDRD7Q8NHU6 1098 aaKnown RBP23.13■■□□□ 1.29
CCDC9-205ENST00000600117 TRPM4Q8TD43 1214 aa23.13■■□□□ 1.29
CCDC9-205ENST00000600117 PPP4R2Q9NY27 417 aa23.13■■□□□ 1.29
CCDC9-205ENST00000600117 PSME4Q14997 1843 aa23.12■■□□□ 1.29
CCDC9-205ENST00000600117 G3V3G9 751 aa23.12■■□□□ 1.29
CCDC9-205ENST00000600117 DCAF8Q5TAQ9 597 aa23.12■■□□□ 1.29
CCDC9-205ENST00000600117 KCNQ5Q9NR82 932 aa23.12■■□□□ 1.29
CCDC9-205ENST00000600117 SAGE1Q9NXZ1 904 aa23.12■■□□□ 1.29
CCDC9-205ENST00000600117 POLR2AP24928 1970 aaKnown RBP23.11■■□□□ 1.29
CCDC9-205ENST00000600117 ZBTB22O15209 634 aa23.11■■□□□ 1.29
CCDC9-205ENST00000600117 RAD17O75943 681 aa23.11■■□□□ 1.29
CCDC9-205ENST00000600117 NUCB1Q02818 461 aa23.11■■□□□ 1.29
CCDC9-205ENST00000600117 B4GALNT3Q6L9W6 998 aa23.11■■□□□ 1.29
CCDC9-205ENST00000600117 CCDC136Q96JN2 1154 aa23.11■■□□□ 1.29
CCDC9-205ENST00000600117 CNOT7Q9UIV1 285 aaKnown RBP23.11■■□□□ 1.29
CCDC9-205ENST00000600117 AKAP11Q9UKA4 1901 aa23.11■■□□□ 1.29
CCDC9-205ENST00000600117 IFIT2P09913 472 aaKnown RBP23.1■■□□□ 1.29
CCDC9-205ENST00000600117 USP48Q86UV5 1035 aa23.1■■□□□ 1.29
CCDC9-205ENST00000600117 VPS37DQ86XT2 251 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms