RNA–Protein interactions for RNA: ENST00000597777.1

FARP1-222, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

Gene FARP1, Length 3,841 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-222	ENST00000597777	SMIM5	Q71RC9	77 aa		11.57	□□□□□ -0.56
FARP1-222	ENST00000597777	ECHDC1	Q9NTX5	307 aa		11.57	□□□□□ -0.56
FARP1-222	ENST00000597777	AKAP2	Q9Y2D5	859 aa		11.57	□□□□□ -0.56
FARP1-222	ENST00000597777	ABCC12	Q96J65	1359 aa		11.57	□□□□□ -0.56
FARP1-222	ENST00000597777	SRCAP	Q6ZRS2	3230 aa		11.57	□□□□□ -0.56
FARP1-222	ENST00000597777	AK9	Q5TCS8	1911 aa		11.57	□□□□□ -0.56
FARP1-222	ENST00000597777	GLRX3	O76003	335 aa	Known RBP	11.57	□□□□□ -0.56
FARP1-222	ENST00000597777	ME1	P48163	572 aa		11.57	□□□□□ -0.56
FARP1-222	ENST00000597777	DNM1	Q05193	864 aa	Known RBP	11.57	□□□□□ -0.56
FARP1-222	ENST00000597777	ZSCAN23	Q3MJ62	389 aa		11.57	□□□□□ -0.56
FARP1-222	ENST00000597777	VPS37D	Q86XT2	251 aa		11.57	□□□□□ -0.56
FARP1-222	ENST00000597777	PI4K2B	Q8TCG2	481 aa		11.57	□□□□□ -0.56
FARP1-222	ENST00000597777	TSPY26P	Q9H489	355 aa		11.57	□□□□□ -0.56
FARP1-222	ENST00000597777	TTC12	Q9H892	705 aa	Predicted RBP	11.57	□□□□□ -0.56
FARP1-222	ENST00000597777	SPEF2	Q9C093	1822 aa		11.57	□□□□□ -0.56
FARP1-222	ENST00000597777		A0A087WWV3	80 aa		11.57	□□□□□ -0.56
FARP1-222	ENST00000597777	GADD45B	O75293	160 aa	Predicted RBP	11.57	□□□□□ -0.56
FARP1-222	ENST00000597777	GJB2	P29033	226 aa		11.57	□□□□□ -0.56
FARP1-222	ENST00000597777	DDIT3	P35638	169 aa		11.57	□□□□□ -0.56
FARP1-222	ENST00000597777	RALYL	Q86SE5	291 aa	Known RBP	11.57	□□□□□ -0.56
FARP1-222	ENST00000597777	EAF2	Q96CJ1	260 aa	Predicted RBP	11.57	□□□□□ -0.56
FARP1-222	ENST00000597777	RIPOR2	Q9Y4F9	1068 aa		11.57	□□□□□ -0.56
FARP1-222	ENST00000597777	MROH5	Q6ZUA9	1318 aa		11.57	□□□□□ -0.56
FARP1-222	ENST00000597777	POLR3D	P05423	398 aa	Predicted RBP	11.56	□□□□□ -0.56
FARP1-222	ENST00000597777	NLGN1	Q8N2Q7	840 aa		11.56	□□□□□ -0.56
FARP1-222	ENST00000597777	ILDR1	Q86SU0	546 aa	Predicted RBP	11.56	□□□□□ -0.56
FARP1-222	ENST00000597777	CDC5L	Q99459	802 aa	Known RBP	11.56	□□□□□ -0.56
FARP1-222	ENST00000597777	TMX1	Q9H3N1	280 aa		11.56	□□□□□ -0.56
FARP1-222	ENST00000597777	PNPLA7	Q6ZV29	1317 aa		11.56	□□□□□ -0.56
FARP1-222	ENST00000597777	CHGB	P05060	677 aa		11.56	□□□□□ -0.56
FARP1-222	ENST00000597777	CEP126	Q9P2H0	1117 aa		11.56	□□□□□ -0.56
FARP1-222	ENST00000597777	EZH2	Q15910	746 aa	Known RBP	11.55	□□□□□ -0.56
FARP1-222	ENST00000597777	LRRC24	Q50LG9	513 aa		11.55	□□□□□ -0.56
FARP1-222	ENST00000597777	CNBD1	Q8NA66	436 aa		11.55	□□□□□ -0.56
FARP1-222	ENST00000597777	NUP133	Q8WUM0	1156 aa		11.55	□□□□□ -0.56
FARP1-222	ENST00000597777	NLRP3	Q96P20	1036 aa		11.55	□□□□□ -0.56
FARP1-222	ENST00000597777	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.55	□□□□□ -0.56
FARP1-222	ENST00000597777	AK2	P54819	239 aa		11.55	□□□□□ -0.56
FARP1-222	ENST00000597777	LDHAL6A	Q6ZMR3	332 aa		11.55	□□□□□ -0.56
FARP1-222	ENST00000597777	TICAM2	Q86XR7	235 aa		11.55	□□□□□ -0.56
FARP1-222	ENST00000597777	COL23A1	Q86Y22	540 aa	Predicted RBP	11.55	□□□□□ -0.56
FARP1-222	ENST00000597777	SEC62	Q99442	399 aa	Known RBP	11.55	□□□□□ -0.56
FARP1-222	ENST00000597777	CHML	P26374	656 aa		11.55	□□□□□ -0.56
FARP1-222	ENST00000597777	SLC15A2	Q16348	729 aa		11.55	□□□□□ -0.56
FARP1-222	ENST00000597777	SASS6	Q6UVJ0	657 aa		11.55	□□□□□ -0.56
FARP1-222	ENST00000597777	BRF1	Q92994	677 aa		11.55	□□□□□ -0.56
FARP1-222	ENST00000597777	STK32B	Q9NY57	414 aa		11.55	□□□□□ -0.56
FARP1-222	ENST00000597777	IGHMBP2	P38935	993 aa	Known RBP	11.54	□□□□□ -0.56
FARP1-222	ENST00000597777	ST5	P78524	1137 aa		11.54	□□□□□ -0.56
FARP1-222	ENST00000597777	EN1	Q05925	392 aa	Predicted RBP	11.54	□□□□□ -0.56
FARP1-222	ENST00000597777	OTUD7B	Q6GQQ9	843 aa		11.54	□□□□□ -0.56
FARP1-222	ENST00000597777	USP48	Q86UV5	1035 aa		11.54	□□□□□ -0.56
FARP1-222	ENST00000597777	VGLL2	Q8N8G2	317 aa		11.54	□□□□□ -0.56
FARP1-222	ENST00000597777	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.54	□□□□□ -0.56
FARP1-222	ENST00000597777	ATP6V1D	Q9Y5K8	247 aa		11.54	□□□□□ -0.56
FARP1-222	ENST00000597777	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.54	□□□□□ -0.56
FARP1-222	ENST00000597777	PUS3	Q9BZE2	481 aa	Known RBP	11.54	□□□□□ -0.56
FARP1-222	ENST00000597777	POLRMT	O00411	1230 aa	Known RBP	11.54	□□□□□ -0.56
FARP1-222	ENST00000597777	ATP5J	P18859	108 aa		11.54	□□□□□ -0.56
FARP1-222	ENST00000597777	TRDN	Q13061	729 aa		11.54	□□□□□ -0.56
FARP1-222	ENST00000597777	TTC39A	Q5SRH9	613 aa		11.54	□□□□□ -0.56
FARP1-222	ENST00000597777	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.54	□□□□□ -0.56
FARP1-222	ENST00000597777	PRR5L	Q6MZQ0	368 aa		11.53	□□□□□ -0.56
FARP1-222	ENST00000597777	SPATA32	Q96LK8	384 aa		11.53	□□□□□ -0.56
FARP1-222	ENST00000597777	DBNL	Q9UJU6	430 aa	Known RBP	11.53	□□□□□ -0.56
FARP1-222	ENST00000597777	RFX7	Q2KHR2	1363 aa		11.53	□□□□□ -0.56
FARP1-222	ENST00000597777	SERPINB2	P05120	415 aa		11.53	□□□□□ -0.56
FARP1-222	ENST00000597777	NMI	Q13287	307 aa	Predicted RBP	11.53	□□□□□ -0.56
FARP1-222	ENST00000597777	MPHOSPH8	Q99549	860 aa		11.53	□□□□□ -0.56
FARP1-222	ENST00000597777	RBSN	Q9H1K0	784 aa		11.53	□□□□□ -0.56
FARP1-222	ENST00000597777	RBM8A	Q9Y5S9	174 aa	Known RBP	11.53	□□□□□ -0.56
FARP1-222	ENST00000597777	WDR33	Q9C0J8	1336 aa	Known RBP	11.53	□□□□□ -0.56
FARP1-222	ENST00000597777	METTL24	Q5JXM2	366 aa		11.53	□□□□□ -0.56
FARP1-222	ENST00000597777	TLR7	Q9NYK1	1049 aa	Known RBP	11.53	□□□□□ -0.56
FARP1-222	ENST00000597777	DHX16	O60231	1041 aa	Known RBP	11.52	□□□□□ -0.56
FARP1-222	ENST00000597777	TNMD	Q9H2S6	317 aa		11.52	□□□□□ -0.56
FARP1-222	ENST00000597777	NCOA5	Q9HCD5	579 aa	Known RBP	11.52	□□□□□ -0.56
FARP1-222	ENST00000597777	BSDC1	Q9NW68	430 aa	Predicted RBP	11.52	□□□□□ -0.56
FARP1-222	ENST00000597777	KLRG2	A4D1S0	409 aa	Predicted RBP	11.52	□□□□□ -0.57
FARP1-222	ENST00000597777	PDE8B	O95263	885 aa		11.52	□□□□□ -0.57
FARP1-222	ENST00000597777	DDR1	Q08345	913 aa		11.52	□□□□□ -0.57
FARP1-222	ENST00000597777	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.52	□□□□□ -0.57
FARP1-222	ENST00000597777	CRY2	Q49AN0	593 aa		11.52	□□□□□ -0.57
FARP1-222	ENST00000597777	ANKRD18A	Q8IVF6	992 aa		11.52	□□□□□ -0.57
FARP1-222	ENST00000597777	ANKRD31	Q8N7Z5	1873 aa		11.52	□□□□□ -0.57
FARP1-222	ENST00000597777		A0A1B0GUL7	405 aa		11.52	□□□□□ -0.57
FARP1-222	ENST00000597777	IGSF3	O75054	1194 aa		11.52	□□□□□ -0.57
FARP1-222	ENST00000597777	RAB3GAP1	Q15042	981 aa		11.52	□□□□□ -0.57
FARP1-222	ENST00000597777	C3orf67	Q6ZVT6	689 aa		11.52	□□□□□ -0.57
FARP1-222	ENST00000597777	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.52	□□□□□ -0.57
FARP1-222	ENST00000597777	SEC31B	Q9NQW1	1179 aa		11.52	□□□□□ -0.57
FARP1-222	ENST00000597777	TRMT1	Q9NXH9	659 aa	Known RBP	11.52	□□□□□ -0.57
FARP1-222	ENST00000597777	STX6	O43752	255 aa		11.51	□□□□□ -0.57
FARP1-222	ENST00000597777	PUM3	Q15397	648 aa	Known RBP	11.51	□□□□□ -0.57
FARP1-222	ENST00000597777	CCDC73	Q6ZRK6	1079 aa		11.51	□□□□□ -0.57
FARP1-222	ENST00000597777	RASEF	Q8IZ41	740 aa		11.51	□□□□□ -0.57
FARP1-222	ENST00000597777	EVI5L	Q96CN4	794 aa		11.51	□□□□□ -0.57
FARP1-222	ENST00000597777	LRRC37A	A6NMS7	1700 aa		11.51	□□□□□ -0.57
FARP1-222	ENST00000597777	COL4A1	P02462	1669 aa		11.51	□□□□□ -0.57
FARP1-222	ENST00000597777	MINDY4B	A8MYZ0	360 aa		11.51	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms