RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 MRC1P22897 1456 aa17.99■□□□□ 0.47
IRF3-219ENST00000597636 BIN1O00499 593 aa17.99■□□□□ 0.47
IRF3-219ENST00000597636 URI1O94763 535 aaPredicted RBP17.99■□□□□ 0.47
IRF3-219ENST00000597636 SF3A1Q15459 793 aaKnown RBP17.99■□□□□ 0.47
IRF3-219ENST00000597636 LRRFIP1Q32MZ4 808 aaKnown RBP17.99■□□□□ 0.47
IRF3-219ENST00000597636 MPRIPQ6WCQ1 1025 aa17.99■□□□□ 0.47
IRF3-219ENST00000597636 TXLNBQ8N3L3 684 aa17.99■□□□□ 0.47
IRF3-219ENST00000597636 PPFIA3O75145 1194 aa17.99■□□□□ 0.47
IRF3-219ENST00000597636 DDX58O95786 925 aaKnown RBP17.99■□□□□ 0.47
IRF3-219ENST00000597636 AKAP4Q5JQC9 854 aa17.99■□□□□ 0.47
IRF3-219ENST00000597636 CCDC158Q5M9N0 1113 aa17.99■□□□□ 0.47
IRF3-219ENST00000597636 TRERF1Q96PN7 1200 aa17.99■□□□□ 0.47
IRF3-219ENST00000597636 CARD6Q9BX69 1037 aa17.99■□□□□ 0.47
IRF3-219ENST00000597636 ABCC6O95255 1503 aa17.99■□□□□ 0.47
IRF3-219ENST00000597636 FANCGO15287 622 aa17.98■□□□□ 0.47
IRF3-219ENST00000597636 SEC31AO94979 1220 aaKnown RBP17.98■□□□□ 0.47
IRF3-219ENST00000597636 LMOD1P29536 600 aaPredicted RBP17.98■□□□□ 0.47
IRF3-219ENST00000597636 RAD51AP2Q09MP3 1159 aa17.98■□□□□ 0.47
IRF3-219ENST00000597636 STK38Q15208 465 aa17.98■□□□□ 0.47
IRF3-219ENST00000597636 ZNF530Q6P9A1 599 aaPredicted RBP17.98■□□□□ 0.47
IRF3-219ENST00000597636 REXO1L1PQ8IX06 675 aa17.98■□□□□ 0.47
IRF3-219ENST00000597636 NEK11Q8NG66 645 aa17.98■□□□□ 0.47
IRF3-219ENST00000597636 KCNG4Q8TDN1 519 aa17.98■□□□□ 0.47
IRF3-219ENST00000597636 TMX1Q9H3N1 280 aa17.98■□□□□ 0.47
IRF3-219ENST00000597636 PARP3Q9Y6F1 533 aa17.98■□□□□ 0.47
IRF3-219ENST00000597636 CARMIL3Q8ND23 1372 aa17.97■□□□□ 0.47
IRF3-219ENST00000597636 IKBKBO14920 756 aa17.97■□□□□ 0.47
IRF3-219ENST00000597636 IGKV5-2P06315 115 aa17.97■□□□□ 0.47
IRF3-219ENST00000597636 PDIA3P30101 505 aaKnown RBP17.97■□□□□ 0.47
IRF3-219ENST00000597636 TNNI3KQ59H18 835 aa17.97■□□□□ 0.47
IRF3-219ENST00000597636 CLIC4Q9Y696 253 aa17.97■□□□□ 0.47
IRF3-219ENST00000597636 FPGT-TNNI3KV9GXZ4 949 aa17.97■□□□□ 0.47
IRF3-219ENST00000597636 PRAMEF22A3QJZ6 481 aa17.97■□□□□ 0.47
IRF3-219ENST00000597636 MUM1L1Q5H9M0 696 aa17.97■□□□□ 0.47
IRF3-219ENST00000597636 ZNF274Q96GC6 653 aaPredicted RBP17.97■□□□□ 0.47
IRF3-219ENST00000597636 FEZ2Q9UHY8 353 aaPredicted RBP17.97■□□□□ 0.47
IRF3-219ENST00000597636 HEG1Q9ULI3 1381 aa17.97■□□□□ 0.47
IRF3-219ENST00000597636 ZNF202O95125 648 aa17.97■□□□□ 0.47
IRF3-219ENST00000597636 TBC1D8O95759 1140 aa17.97■□□□□ 0.47
IRF3-219ENST00000597636 FDPSP14324 419 aaKnown RBP17.97■□□□□ 0.47
IRF3-219ENST00000597636 EVCP57679 992 aa17.97■□□□□ 0.47
IRF3-219ENST00000597636 AIMP1Q12904 312 aaKnown RBP17.97■□□□□ 0.47
IRF3-219ENST00000597636 YEATS4O95619 227 aa17.96■□□□□ 0.47
IRF3-219ENST00000597636 ATP1A3P13637 1013 aa17.96■□□□□ 0.47
IRF3-219ENST00000597636 EPHA10Q5JZY3 1008 aa17.96■□□□□ 0.47
IRF3-219ENST00000597636 IPO4Q8TEX9 1081 aaKnown RBP17.96■□□□□ 0.47
IRF3-219ENST00000597636 IP6K1Q92551 441 aa17.96■□□□□ 0.47
IRF3-219ENST00000597636 CHMP4CQ96CF2 233 aa17.96■□□□□ 0.47
IRF3-219ENST00000597636 HAUS7Q99871 368 aa17.96■□□□□ 0.47
IRF3-219ENST00000597636 HSD3B7Q9H2F3 369 aa17.96■□□□□ 0.47
IRF3-219ENST00000597636 COPRSQ9NQ92 184 aa17.96■□□□□ 0.47
IRF3-219ENST00000597636 SASH3O75995 380 aa17.96■□□□□ 0.47
IRF3-219ENST00000597636 ST5P78524 1137 aa17.96■□□□□ 0.47
IRF3-219ENST00000597636 KCNH5Q8NCM2 988 aa17.96■□□□□ 0.47
IRF3-219ENST00000597636 UTP14AQ9BVJ6 771 aaKnown RBP17.96■□□□□ 0.47
IRF3-219ENST00000597636 POLR3EQ9NVU0 708 aa17.96■□□□□ 0.47
IRF3-219ENST00000597636 SPTLC2O15270 562 aa17.95■□□□□ 0.46
IRF3-219ENST00000597636 TFCP2Q12800 502 aa17.95■□□□□ 0.46
IRF3-219ENST00000597636 CC2D1AQ6P1N0 951 aaPredicted RBP17.95■□□□□ 0.46
IRF3-219ENST00000597636 SMARCE1Q969G3 411 aa17.95■□□□□ 0.46
IRF3-219ENST00000597636 DDX21Q9NR30 783 aaKnown RBP eCLIP17.95■□□□□ 0.46
IRF3-219ENST00000597636 SH3TC1Q8TE82 1336 aa17.95■□□□□ 0.46
IRF3-219ENST00000597636 RNMTO43148 476 aaKnown RBP17.95■□□□□ 0.46
IRF3-219ENST00000597636 OAS2P29728 719 aaKnown RBP17.95■□□□□ 0.46
IRF3-219ENST00000597636 PDE4CQ08493 712 aa17.95■□□□□ 0.46
IRF3-219ENST00000597636 GPS2Q13227 327 aa17.95■□□□□ 0.46
IRF3-219ENST00000597636 DDX46Q7L014 1031 aaKnown RBP17.95■□□□□ 0.46
IRF3-219ENST00000597636 ARHGEF25Q86VW2 580 aa17.95■□□□□ 0.46
IRF3-219ENST00000597636 FCHSD1Q86WN1 690 aa17.95■□□□□ 0.46
IRF3-219ENST00000597636 ZCCHC17Q9NP64 241 aaKnown RBP17.95■□□□□ 0.46
IRF3-219ENST00000597636 UBASH3AP57075 661 aa17.94■□□□□ 0.46
IRF3-219ENST00000597636 MPHOSPH8Q99549 860 aa17.94■□□□□ 0.46
IRF3-219ENST00000597636 ZSCAN12O43309 604 aa17.94■□□□□ 0.46
IRF3-219ENST00000597636 CBFA2T2O43439 604 aa17.94■□□□□ 0.46
IRF3-219ENST00000597636 SMC1AQ14683 1233 aaKnown RBP17.94■□□□□ 0.46
IRF3-219ENST00000597636 PLEKHO1Q53GL0 409 aaPredicted RBP17.94■□□□□ 0.46
IRF3-219ENST00000597636 GPR161Q8N6U8 529 aaKnown RBP17.94■□□□□ 0.46
IRF3-219ENST00000597636 KBTBD3Q8NAB2 608 aa17.94■□□□□ 0.46
IRF3-219ENST00000597636 ANKRD24Q8TF21 1146 aa17.94■□□□□ 0.46
IRF3-219ENST00000597636 DBNDD2Q9BQY9 259 aa17.94■□□□□ 0.46
IRF3-219ENST00000597636 DSCC1Q9BVC3 393 aa17.94■□□□□ 0.46
IRF3-219ENST00000597636 E7EWF7 191 aa17.93■□□□□ 0.46
IRF3-219ENST00000597636 POLR3DP05423 398 aaPredicted RBP17.93■□□□□ 0.46
IRF3-219ENST00000597636 OTUD7BQ6GQQ9 843 aa17.93■□□□□ 0.46
IRF3-219ENST00000597636 RIC3Q7Z5B4 369 aa17.93■□□□□ 0.46
IRF3-219ENST00000597636 DPF2Q92785 391 aa17.93■□□□□ 0.46
IRF3-219ENST00000597636 EPC1Q9H2F5 836 aa17.93■□□□□ 0.46
IRF3-219ENST00000597636 MARF1Q9Y4F3 1742 aaKnown RBP17.93■□□□□ 0.46
IRF3-219ENST00000597636 NEURL1BA8MQ27 555 aa17.93■□□□□ 0.46
IRF3-219ENST00000597636 CSB-PGBD3P0DP91 1061 aa17.93■□□□□ 0.46
IRF3-219ENST00000597636 GCKRQ14397 625 aa17.93■□□□□ 0.46
IRF3-219ENST00000597636 KRBA2Q6ZNG9 492 aa17.93■□□□□ 0.46
IRF3-219ENST00000597636 TRIM34Q9BYJ4 488 aa17.93■□□□□ 0.46
IRF3-219ENST00000597636 VWA3AA6NCI4 1184 aa17.93■□□□□ 0.46
IRF3-219ENST00000597636 PTPN12Q05209 780 aaKnown RBP17.93■□□□□ 0.46
IRF3-219ENST00000597636 NLRP2Q9NX02 1062 aa17.93■□□□□ 0.46
IRF3-219ENST00000597636 SERPINC1P01008 464 aa17.92■□□□□ 0.46
IRF3-219ENST00000597636 CMA1P23946 247 aa17.92■□□□□ 0.46
IRF3-219ENST00000597636 RFX5P48382 616 aaPredicted RBP17.92■□□□□ 0.46
IRF3-219ENST00000597636 MAP3K9P80192 1104 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms