RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.71■■□□□ 1.872e-11■□□□□ 10.8
SRRM1-222ENST00000596378 ZSCAN16Q9H4T2 348 aaPredicted RBP26.71■■□□□ 1.87
SRRM1-222ENST00000596378 ADCY5O95622 1261 aa26.7■■□□□ 1.86
SRRM1-222ENST00000596378 HMGN5P82970 282 aaKnown RBP26.7■■□□□ 1.86
SRRM1-222ENST00000596378 MYH15Q9Y2K3 1946 aa26.7■■□□□ 1.86
SRRM1-222ENST00000596378 PRC1O43663 620 aa26.7■■□□□ 1.86
SRRM1-222ENST00000596378 ATP6V1AP38606 617 aa26.7■■□□□ 1.86
SRRM1-222ENST00000596378 MB21D2Q8IYB1 491 aaPredicted RBP26.7■■□□□ 1.86
SRRM1-222ENST00000596378 BICD2Q8TD16 824 aa26.7■■□□□ 1.86
SRRM1-222ENST00000596378 DENND2AQ9ULE3 1009 aa26.7■■□□□ 1.86
SRRM1-222ENST00000596378 SPATA31A1Q5TZJ5 1347 aa26.69■■□□□ 1.86
SRRM1-222ENST00000596378 CRKLP46109 303 aaKnown RBP26.69■■□□□ 1.86
SRRM1-222ENST00000596378 MAP3K11Q16584 847 aa26.69■■□□□ 1.86
SRRM1-222ENST00000596378 NR1I2O75469 434 aa26.68■■□□□ 1.86
SRRM1-222ENST00000596378 ADD1P35611 737 aaKnown RBP26.68■■□□□ 1.86
SRRM1-222ENST00000596378 ANTXR2P58335 489 aa26.68■■□□□ 1.86
SRRM1-222ENST00000596378 PLCB2Q00722 1185 aa26.68■■□□□ 1.86
SRRM1-222ENST00000596378 NAA16Q6N069 864 aaPredicted RBP26.68■■□□□ 1.86
SRRM1-222ENST00000596378 CCDC87Q9NVE4 849 aa26.68■■□□□ 1.86
SRRM1-222ENST00000596378 ZNF213O14771 459 aa26.68■■□□□ 1.86
SRRM1-222ENST00000596378 CCDC192P0DO97 292 aa26.68■■□□□ 1.86
SRRM1-222ENST00000596378 NKX2-3Q8TAU0 364 aa26.68■■□□□ 1.86
SRRM1-222ENST00000596378 SEC31BQ9NQW1 1179 aa26.68■■□□□ 1.86
SRRM1-222ENST00000596378 WWC3Q9ULE0 1092 aa26.68■■□□□ 1.86
SRRM1-222ENST00000596378 FDPSP14324 419 aaKnown RBP26.67■■□□□ 1.86
SRRM1-222ENST00000596378 MARCH10Q8NA82 808 aaPredicted RBP26.67■■□□□ 1.86
SRRM1-222ENST00000596378 ZNF512BQ96KM6 892 aaPredicted RBP26.67■■□□□ 1.86
SRRM1-222ENST00000596378 NBPF3Q9H094 633 aa26.67■■□□□ 1.86
SRRM1-222ENST00000596378 TNMDQ9H2S6 317 aa26.67■■□□□ 1.86
SRRM1-222ENST00000596378 CARMIL3Q8ND23 1372 aa26.67■■□□□ 1.86
SRRM1-222ENST00000596378 ZNF532Q9HCE3 1301 aa26.67■■□□□ 1.86
SRRM1-222ENST00000596378 AP5Z1O43299 807 aa26.67■■□□□ 1.86
SRRM1-222ENST00000596378 LRP5O75197 1615 aa26.66■■□□□ 1.86
SRRM1-222ENST00000596378 KDM4AO75164 1064 aa26.66■■□□□ 1.86
SRRM1-222ENST00000596378 MCM5P33992 734 aa26.66■■□□□ 1.86
SRRM1-222ENST00000596378 ITPK1Q13572 414 aa26.66■■□□□ 1.86
SRRM1-222ENST00000596378 PUM3Q15397 648 aaKnown RBP26.66■■□□□ 1.86
SRRM1-222ENST00000596378 KLF18A0A0U1RQI7 1052 aa26.66■■□□□ 1.86
SRRM1-222ENST00000596378 NCOA7Q8NI08 942 aa26.66■■□□□ 1.86
SRRM1-222ENST00000596378 ARID4AP29374 1257 aaPredicted RBP26.65■■□□□ 1.86
SRRM1-222ENST00000596378 EVCP57679 992 aa26.65■■□□□ 1.86
SRRM1-222ENST00000596378 TTF1Q15361 905 aaPredicted RBP26.65■■□□□ 1.86
SRRM1-222ENST00000596378 RALYLQ86SE5 291 aaKnown RBP26.65■■□□□ 1.86
SRRM1-222ENST00000596378 CFAP45Q9UL16 551 aa26.65■■□□□ 1.86
SRRM1-222ENST00000596378 MRVI1Q9Y6F6 885 aa26.65■■□□□ 1.86
SRRM1-222ENST00000596378 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.65■■□□□ 1.864e-9■□□□□ 9.2
SRRM1-222ENST00000596378 LOC102724428A0A0B4J2F2 783 aa26.65■■□□□ 1.86
SRRM1-222ENST00000596378 ZNF500O60304 480 aaPredicted RBP26.65■■□□□ 1.86
SRRM1-222ENST00000596378 PDE6AP16499 860 aa26.65■■□□□ 1.86
SRRM1-222ENST00000596378 FGFR2P21802 821 aa26.65■■□□□ 1.86
SRRM1-222ENST00000596378 SIK1P57059 783 aa26.65■■□□□ 1.86
SRRM1-222ENST00000596378 TYRO3Q06418 890 aa26.65■■□□□ 1.86
SRRM1-222ENST00000596378 ZSCAN25Q6NSZ9 544 aa26.65■■□□□ 1.86
SRRM1-222ENST00000596378 FBXL16Q8N461 479 aa26.65■■□□□ 1.86
SRRM1-222ENST00000596378 LPIN2Q92539 896 aa26.65■■□□□ 1.86
SRRM1-222ENST00000596378 GOLGA8BA8MQT2 603 aa26.64■■□□□ 1.86
SRRM1-222ENST00000596378 APPP05067 770 aa26.64■■□□□ 1.86
SRRM1-222ENST00000596378 OTUD7BQ6GQQ9 843 aa26.64■■□□□ 1.86
SRRM1-222ENST00000596378 ILDR1Q86SU0 546 aaPredicted RBP26.64■■□□□ 1.86
SRRM1-222ENST00000596378 TBC1D10CQ8IV04 446 aa26.64■■□□□ 1.86
SRRM1-222ENST00000596378 ZNF830Q96NB3 372 aaPredicted RBP26.64■■□□□ 1.86
SRRM1-222ENST00000596378 CLSTN2Q9H4D0 955 aa26.64■■□□□ 1.86
SRRM1-222ENST00000596378 HPS5Q9UPZ3 1129 aa26.64■■□□□ 1.86
SRRM1-222ENST00000596378 KIF3AQ9Y496 699 aa26.64■■□□□ 1.86
SRRM1-222ENST00000596378 MYH14Q7Z406 1995 aaKnown RBP26.64■■□□□ 1.86
SRRM1-222ENST00000596378 NRAPQ86VF7 1730 aa26.64■■□□□ 1.85
SRRM1-222ENST00000596378 NUTM2BA6NNL0 878 aaPredicted RBP26.64■■□□□ 1.85
SRRM1-222ENST00000596378 NUTM2EB1AL46 878 aaPredicted RBP26.64■■□□□ 1.85
SRRM1-222ENST00000596378 NUTM2AQ8IVF1 878 aaPredicted RBP26.64■■□□□ 1.85
SRRM1-222ENST00000596378 USP28Q96RU2 1077 aa26.64■■□□□ 1.85
SRRM1-222ENST00000596378 DDX19AQ9NUU7 478 aaKnown RBP26.64■■□□□ 1.85
SRRM1-222ENST00000596378 MROH5Q6ZUA9 1318 aa26.63■■□□□ 1.85
SRRM1-222ENST00000596378 DDX60Q8IY21 1712 aaKnown RBP26.63■■□□□ 1.85
SRRM1-222ENST00000596378 UTP14AQ9BVJ6 771 aaKnown RBP26.63■■□□□ 1.85
SRRM1-222ENST00000596378 ATRNO75882 1429 aa26.63■■□□□ 1.85
SRRM1-222ENST00000596378 OFD1O75665 1012 aa26.62■■□□□ 1.85
SRRM1-222ENST00000596378 CAMTA2O94983 1202 aa26.62■■□□□ 1.85
SRRM1-222ENST00000596378 UBE3CQ15386 1083 aa26.62■■□□□ 1.85
SRRM1-222ENST00000596378 TCRBV5S4A2TA0A5A2 114 aa26.61■■□□□ 1.85
SRRM1-222ENST00000596378 MPHOSPH8Q99549 860 aa26.61■■□□□ 1.85
SRRM1-222ENST00000596378 CDCA7Q9BWT1 371 aaPredicted RBP26.61■■□□□ 1.85
SRRM1-222ENST00000596378 PHLPP1O60346 1717 aa26.61■■□□□ 1.85
SRRM1-222ENST00000596378 ARAP2Q8WZ64 1704 aa26.61■■□□□ 1.85
SRRM1-222ENST00000596378 UQCRFS1P1P0C7P4 283 aa26.61■■□□□ 1.85
SRRM1-222ENST00000596378 RASGRF1Q13972 1273 aa26.61■■□□□ 1.85
SRRM1-222ENST00000596378 SPATA5Q8NB90 893 aa26.6■■□□□ 1.85
SRRM1-222ENST00000596378 GJB4Q9NTQ9 266 aa26.6■■□□□ 1.85
SRRM1-222ENST00000596378 SLC5A1P13866 664 aa26.6■■□□□ 1.85
SRRM1-222ENST00000596378 CYB5R4Q7L1T6 521 aa26.6■■□□□ 1.85
SRRM1-222ENST00000596378 LUZP1Q86V48 1076 aa26.6■■□□□ 1.85
SRRM1-222ENST00000596378 KLHL34Q8N239 644 aa26.6■■□□□ 1.85
SRRM1-222ENST00000596378 NIP7Q9Y221 180 aaKnown RBP eCLIP26.6■■□□□ 1.85
SRRM1-222ENST00000596378 KCNQ2O43526 872 aa26.59■■□□□ 1.85
SRRM1-222ENST00000596378 ANO6Q4KMQ2 910 aa26.59■■□□□ 1.85
SRRM1-222ENST00000596378 FAM200AQ8TCP9 573 aa26.59■■□□□ 1.85
SRRM1-222ENST00000596378 RCOR1Q9UKL0 485 aa26.59■■□□□ 1.85
SRRM1-222ENST00000596378 RBM43Q6ZSC3 357 aaKnown RBP26.59■■□□□ 1.85
SRRM1-222ENST00000596378 AK7Q96M32 723 aa26.59■■□□□ 1.85
SRRM1-222ENST00000596378 GOLPH3LQ9H4A5 285 aa26.59■■□□□ 1.85
SRRM1-222ENST00000596378 INCENPQ9NQS7 918 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms