RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 RBM27Q9P2N5 1060 aaKnown RBP13.1□□□□□ -0.31
SDF2-209ENST00000591903 FZD1Q9UP38 647 aa13.1□□□□□ -0.31
SDF2-209ENST00000591903 RANBP2P49792 3224 aaKnown RBP13.09□□□□□ -0.31
SDF2-209ENST00000591903 APAF1O14727 1248 aa13.09□□□□□ -0.31
SDF2-209ENST00000591903 WDHD1O75717 1129 aaPredicted RBP13.09□□□□□ -0.31
SDF2-209ENST00000591903 GNRH1P01148 92 aa13.09□□□□□ -0.31
SDF2-209ENST00000591903 CTSWP56202 376 aa13.09□□□□□ -0.31
SDF2-209ENST00000591903 MYD88Q99836 296 aa13.09□□□□□ -0.31
SDF2-209ENST00000591903 PTPN18Q99952 460 aa13.09□□□□□ -0.31
SDF2-209ENST00000591903 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.09□□□□□ -0.31
SDF2-209ENST00000591903 COL6A3P12111 3177 aa13.08□□□□□ -0.32
SDF2-209ENST00000591903 GJA5P36382 358 aa13.08□□□□□ -0.32
SDF2-209ENST00000591903 PRMT2P55345 433 aa13.08□□□□□ -0.32
SDF2-209ENST00000591903 GTF2IP78347 998 aa13.08□□□□□ -0.32
SDF2-209ENST00000591903 CAP1Q01518 475 aa13.08□□□□□ -0.32
SDF2-209ENST00000591903 KIF22Q14807 665 aa13.08□□□□□ -0.32
SDF2-209ENST00000591903 TAF1CQ15572 869 aaPredicted RBP13.08□□□□□ -0.32
SDF2-209ENST00000591903 CCDC146Q8IYE0 955 aa13.08□□□□□ -0.32
SDF2-209ENST00000591903 NKX2-3Q8TAU0 364 aa13.08□□□□□ -0.32
SDF2-209ENST00000591903 HTATIP2Q9BUP3 242 aa13.08□□□□□ -0.32
SDF2-209ENST00000591903 LAS1LQ9Y4W2 734 aaKnown RBP13.08□□□□□ -0.32
SDF2-209ENST00000591903 A0A1W2PPC1 479 aa13.07□□□□□ -0.32
SDF2-209ENST00000591903 USP2O75604 605 aaPredicted RBP13.07□□□□□ -0.32
SDF2-209ENST00000591903 GTF2A2P52657 109 aa13.07□□□□□ -0.32
SDF2-209ENST00000591903 DUSP27Q5VZP5 1158 aa13.07□□□□□ -0.32
SDF2-209ENST00000591903 DPF3Q92784 378 aa13.07□□□□□ -0.32
SDF2-209ENST00000591903 OPTNQ96CV9 577 aa13.07□□□□□ -0.32
SDF2-209ENST00000591903 ANKRD2Q9GZV1 360 aa13.07□□□□□ -0.32
SDF2-209ENST00000591903 IL16Q14005 1332 aa13.07□□□□□ -0.32
SDF2-209ENST00000591903 WTIPA6NIX2 430 aaPredicted RBP13.06□□□□□ -0.32
SDF2-209ENST00000591903 DDX58O95786 925 aaKnown RBP13.06□□□□□ -0.32
SDF2-209ENST00000591903 IGHMBP2P38935 993 aaKnown RBP13.06□□□□□ -0.32
SDF2-209ENST00000591903 MNX1P50219 401 aaPredicted RBP13.06□□□□□ -0.32
SDF2-209ENST00000591903 TNFAIP1Q13829 316 aa13.06□□□□□ -0.32
SDF2-209ENST00000591903 TXNRD3Q86VQ6 643 aa13.06□□□□□ -0.32
SDF2-209ENST00000591903 WDR63Q8IWG1 891 aa13.06□□□□□ -0.32
SDF2-209ENST00000591903 TTLL11Q8NHH1 800 aa13.06□□□□□ -0.32
SDF2-209ENST00000591903 MS4A4AQ96JQ5 239 aa13.06□□□□□ -0.32
SDF2-209ENST00000591903 ZCCHC17Q9NP64 241 aaKnown RBP13.06□□□□□ -0.32
SDF2-209ENST00000591903 SPDYE2BA6NHP3 402 aa13.05□□□□□ -0.32
SDF2-209ENST00000591903 SPDYE6P0CI01 402 aa13.05□□□□□ -0.32
SDF2-209ENST00000591903 NBPF12Q5TAG4 269 aaPredicted RBP13.05□□□□□ -0.32
SDF2-209ENST00000591903 SH3TC2Q8TF17 1288 aa13.05□□□□□ -0.32
SDF2-209ENST00000591903 METTL22Q9BUU2 404 aaPredicted RBP13.05□□□□□ -0.32
SDF2-209ENST00000591903 CHMP4AQ9BY43 222 aa13.05□□□□□ -0.32
SDF2-209ENST00000591903 PRO3102Q9H379 93 aa13.05□□□□□ -0.32
SDF2-209ENST00000591903 GREM2Q9H772 168 aa13.05□□□□□ -0.32
SDF2-209ENST00000591903 TRIM35Q9UPQ4 493 aa13.05□□□□□ -0.32
SDF2-209ENST00000591903 NR2E3Q9Y5X4 410 aa13.05□□□□□ -0.32
SDF2-209ENST00000591903 ZNF521Q96K83 1311 aa13.05□□□□□ -0.32
SDF2-209ENST00000591903 ARAP2Q8WZ64 1704 aa13.05□□□□□ -0.32
SDF2-209ENST00000591903 A0A0C4DFX4 3053 aa13.04□□□□□ -0.32
SDF2-209ENST00000591903 ZSWIM8A7E2V4 1837 aa13.04□□□□□ -0.32
SDF2-209ENST00000591903 CCL15-CCL14A0A0B4J2E2 113 aa13.04□□□□□ -0.32
SDF2-209ENST00000591903 MYCP01106 439 aaPredicted RBP13.04□□□□□ -0.32
SDF2-209ENST00000591903 KCNJ4P48050 445 aa13.04□□□□□ -0.32
SDF2-209ENST00000591903 FKBP1AP62942 108 aaKnown RBP13.04□□□□□ -0.32
SDF2-209ENST00000591903 LACTBP83111 547 aaPredicted RBP13.04□□□□□ -0.32
SDF2-209ENST00000591903 CCL15Q16663 113 aa13.04□□□□□ -0.32
SDF2-209ENST00000591903 CFAP100Q494V2 611 aa13.04□□□□□ -0.32
SDF2-209ENST00000591903 WWC1Q8IX03 1113 aa13.04□□□□□ -0.32
SDF2-209ENST00000591903 BRI3BPQ8WY22 251 aa13.04□□□□□ -0.32
SDF2-209ENST00000591903 PHAXQ9H814 394 aaKnown RBP13.04□□□□□ -0.32
SDF2-209ENST00000591903 ELP3Q9H9T3 547 aa13.04□□□□□ -0.32
SDF2-209ENST00000591903 VEZTQ9HBM0 779 aa13.04□□□□□ -0.32
SDF2-209ENST00000591903 CD209Q9NNX6 404 aa13.04□□□□□ -0.32
SDF2-209ENST00000591903 CUL9Q8IWT3 2517 aa13.04□□□□□ -0.32
SDF2-209ENST00000591903 A0A1B0GUL6 1792 aa13.04□□□□□ -0.32
SDF2-209ENST00000591903 CLRN2A0PK11 232 aa13.03□□□□□ -0.32
SDF2-209ENST00000591903 TLR2O60603 784 aa13.03□□□□□ -0.32
SDF2-209ENST00000591903 RASA3Q14644 834 aa13.03□□□□□ -0.32
SDF2-209ENST00000591903 NEUROD2Q15784 382 aa13.03□□□□□ -0.32
SDF2-209ENST00000591903 JARID2Q92833 1246 aaPredicted RBP13.03□□□□□ -0.32
SDF2-209ENST00000591903 GJA8P48165 433 aa13.02□□□□□ -0.33
SDF2-209ENST00000591903 FAM43AQ8N2R8 423 aa13.02□□□□□ -0.33
SDF2-209ENST00000591903 CERS5Q8N5B7 392 aa13.02□□□□□ -0.33
SDF2-209ENST00000591903 HELBQ8NG08 1087 aaPredicted RBP13.02□□□□□ -0.33
SDF2-209ENST00000591903 SHISA4Q96DD7 197 aa13.02□□□□□ -0.33
SDF2-209ENST00000591903 PRMT6Q96LA8 375 aaPredicted RBP13.02□□□□□ -0.33
SDF2-209ENST00000591903 MPHOSPH8Q99549 860 aa13.02□□□□□ -0.33
SDF2-209ENST00000591903 IFT57Q9NWB7 429 aa13.02□□□□□ -0.33
SDF2-209ENST00000591903 CSADQ9Y600 493 aa13.02□□□□□ -0.33
SDF2-209ENST00000591903 ZBED9Q6R2W3 1325 aa13.02□□□□□ -0.33
SDF2-209ENST00000591903 CAPN2P17655 700 aa13.01□□□□□ -0.33
SDF2-209ENST00000591903 KLRK1P26718 216 aa13.01□□□□□ -0.33
SDF2-209ENST00000591903 HOXD10P28358 340 aa13.01□□□□□ -0.33
SDF2-209ENST00000591903 NEXNQ0ZGT2 675 aa13.01□□□□□ -0.33
SDF2-209ENST00000591903 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.01□□□□□ -0.33
SDF2-209ENST00000591903 C15orf52Q6ZUT6 534 aaKnown RBP13.01□□□□□ -0.33
SDF2-209ENST00000591903 UBE2Q1Q7Z7E8 422 aa13.01□□□□□ -0.33
SDF2-209ENST00000591903 F8W031 263 aaPredicted RBP13□□□□□ -0.33
SDF2-209ENST00000591903 GJB1P08034 283 aa13□□□□□ -0.33
SDF2-209ENST00000591903 ZNF853P0CG23 659 aa13□□□□□ -0.33
SDF2-209ENST00000591903 CETPP11597 493 aa13□□□□□ -0.33
SDF2-209ENST00000591903 RBM5P52756 815 aaKnown RBP eCLIP13□□□□□ -0.33
SDF2-209ENST00000591903 GNAI1P63096 354 aa13□□□□□ -0.33
SDF2-209ENST00000591903 MAP3K9P80192 1104 aa13□□□□□ -0.33
SDF2-209ENST00000591903 VGLL4Q14135 290 aa13□□□□□ -0.33
SDF2-209ENST00000591903 ZNF804AQ7Z570 1209 aa13□□□□□ -0.33
SDF2-209ENST00000591903 MBIPQ9NS73 344 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms