RNA–Protein interactions for RNA: ENST00000591535.5

MBD1-225, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-225ENST00000591535 ARAP2Q8WZ64 1704 aa17.32■□□□□ 0.36
MBD1-225ENST00000591535 POTECB2RU33 542 aa17.32■□□□□ 0.36
MBD1-225ENST00000591535 AGBL3Q8NEM8 1001 aa17.32■□□□□ 0.36
MBD1-225ENST00000591535 GPRC5DQ9NZD1 345 aa17.32■□□□□ 0.36
MBD1-225ENST00000591535 CNOT7Q9UIV1 285 aaKnown RBP17.32■□□□□ 0.36
MBD1-225ENST00000591535 SCN4AP35499 1836 aa17.32■□□□□ 0.36
MBD1-225ENST00000591535 MYH13Q9UKX3 1938 aa17.31■□□□□ 0.36
MBD1-225ENST00000591535 H7C1D1 291 aa17.31■□□□□ 0.36
MBD1-225ENST00000591535 NEFLP07196 543 aa17.31■□□□□ 0.36
MBD1-225ENST00000591535 IFIT2P09913 472 aaKnown RBP17.31■□□□□ 0.36
MBD1-225ENST00000591535 EPS15P42566 896 aa17.31■□□□□ 0.36
MBD1-225ENST00000591535 HDAC1Q13547 482 aaPredicted RBP17.31■□□□□ 0.36
MBD1-225ENST00000591535 CCDC158Q5M9N0 1113 aa17.31■□□□□ 0.36
MBD1-225ENST00000591535 DPF2Q92785 391 aa17.31■□□□□ 0.36
MBD1-225ENST00000591535 DBNDD2Q9BQY9 259 aa17.31■□□□□ 0.36
MBD1-225ENST00000591535 MYO3BQ8WXR4 1341 aa17.3■□□□□ 0.36
MBD1-225ENST00000591535 SMARCA5O60264 1052 aaPredicted RBP17.3■□□□□ 0.36
MBD1-225ENST00000591535 EPHX2P34913 555 aa17.3■□□□□ 0.36
MBD1-225ENST00000591535 TTC39AQ5SRH9 613 aa17.3■□□□□ 0.36
MBD1-225ENST00000591535 MICALL2Q8IY33 904 aa17.3■□□□□ 0.36
MBD1-225ENST00000591535 ZBTB47Q9UFB7 747 aaPredicted RBP17.3■□□□□ 0.36
MBD1-225ENST00000591535 FAM205AQ6ZU69 1335 aa17.3■□□□□ 0.36
MBD1-225ENST00000591535 USP17L8P0C7I0 530 aa17.29■□□□□ 0.36
MBD1-225ENST00000591535 EAPPQ56P03 285 aaPredicted RBP17.29■□□□□ 0.36
MBD1-225ENST00000591535 MFSD14BQ5SR56 506 aa17.29■□□□□ 0.36
MBD1-225ENST00000591535 KIAA0825Q8IV33 1275 aa17.29■□□□□ 0.36
MBD1-225ENST00000591535 TAF1DQ9H5J8 278 aaPredicted RBP17.29■□□□□ 0.36
MBD1-225ENST00000591535 TLR7Q9NYK1 1049 aaKnown RBP17.29■□□□□ 0.36
MBD1-225ENST00000591535 DBNLQ9UJU6 430 aaKnown RBP17.29■□□□□ 0.36
MBD1-225ENST00000591535 DENND2AQ9ULE3 1009 aa17.29■□□□□ 0.36
MBD1-225ENST00000591535 SHTN1A0MZ66 631 aa17.29■□□□□ 0.36
MBD1-225ENST00000591535 F8W031 263 aaPredicted RBP17.29■□□□□ 0.36
MBD1-225ENST00000591535 SEMA3EO15041 775 aa17.29■□□□□ 0.36
MBD1-225ENST00000591535 RBM26Q5T8P6 1007 aaKnown RBP17.29■□□□□ 0.36
MBD1-225ENST00000591535 OGFOD1Q8N543 542 aa17.29■□□□□ 0.36
MBD1-225ENST00000591535 GCC1Q96CN9 775 aa17.29■□□□□ 0.36
MBD1-225ENST00000591535 KIF3CO14782 793 aa17.28■□□□□ 0.36
MBD1-225ENST00000591535 UQCRFS1P1P0C7P4 283 aa17.28■□□□□ 0.36
MBD1-225ENST00000591535 PNMA8AQ86V59 439 aaPredicted RBP17.28■□□□□ 0.36
MBD1-225ENST00000591535 CERS5Q8N5B7 392 aa17.28■□□□□ 0.36
MBD1-225ENST00000591535 WDR66Q8TBY9 1149 aa17.28■□□□□ 0.36
MBD1-225ENST00000591535 TBC1D22AQ8WUA7 517 aa17.28■□□□□ 0.36
MBD1-225ENST00000591535 GMLQ99445 158 aa17.28■□□□□ 0.36
MBD1-225ENST00000591535 ADARB2Q9NS39 739 aaKnown RBP17.28■□□□□ 0.36
MBD1-225ENST00000591535 CLEC11AQ9Y240 323 aa17.28■□□□□ 0.36
MBD1-225ENST00000591535 IGHDP01880 384 aa17.27■□□□□ 0.36
MBD1-225ENST00000591535 HDAC9Q9UKV0 1011 aa17.27■□□□□ 0.36
MBD1-225ENST00000591535 ZNF646O15015 1829 aaPredicted RBP17.27■□□□□ 0.35
MBD1-225ENST00000591535 FKBP1AP62942 108 aaKnown RBP17.26■□□□□ 0.35
MBD1-225ENST00000591535 RASGRF1Q13972 1273 aa17.26■□□□□ 0.35
MBD1-225ENST00000591535 TBC1D10BQ4KMP7 808 aaPredicted RBP17.26■□□□□ 0.35
MBD1-225ENST00000591535 ANKRD45Q5TZF3 282 aa17.26■□□□□ 0.35
MBD1-225ENST00000591535 SAMD7Q7Z3H4 446 aa17.26■□□□□ 0.35
MBD1-225ENST00000591535 ARID4AP29374 1257 aaPredicted RBP17.25■□□□□ 0.35
MBD1-225ENST00000591535 B4GALNT3Q6L9W6 998 aa17.25■□□□□ 0.35
MBD1-225ENST00000591535 USP50Q70EL3 339 aaPredicted RBP17.25■□□□□ 0.35
MBD1-225ENST00000591535 SPATA5Q8NB90 893 aa17.25■□□□□ 0.35
MBD1-225ENST00000591535 MYOZ2Q9NPC6 264 aa17.25■□□□□ 0.35
MBD1-225ENST00000591535 SNRKQ9NRH2 765 aa17.25■□□□□ 0.35
MBD1-225ENST00000591535 HMG20BQ9P0W2 317 aa17.25■□□□□ 0.35
MBD1-225ENST00000591535 TTF2Q9UNY4 1162 aaKnown RBP17.25■□□□□ 0.35
MBD1-225ENST00000591535 COL1A1P02452 1464 aaPredicted RBP17.24■□□□□ 0.35
MBD1-225ENST00000591535 TOMM70O94826 608 aa17.24■□□□□ 0.35
MBD1-225ENST00000591535 MCAMP43121 646 aa17.24■□□□□ 0.35
MBD1-225ENST00000591535 RBM5P52756 815 aaKnown RBP eCLIP17.24■□□□□ 0.35
MBD1-225ENST00000591535 ZNF280AP59817 542 aaPredicted RBP17.24■□□□□ 0.35
MBD1-225ENST00000591535 SCARF1Q14162 830 aa17.24■□□□□ 0.35
MBD1-225ENST00000591535 PI16Q6UXB8 463 aa17.24■□□□□ 0.35
MBD1-225ENST00000591535 ABCF2Q9UG63 623 aa17.24■□□□□ 0.35
MBD1-225ENST00000591535 POTEIP0CG38 1075 aa17.23■□□□□ 0.35
MBD1-225ENST00000591535 POTEJP0CG39 1038 aa17.23■□□□□ 0.35
MBD1-225ENST00000591535 MMP14P50281 582 aa17.23■□□□□ 0.35
MBD1-225ENST00000591535 KIF4BQ2VIQ3 1234 aa17.23■□□□□ 0.35
MBD1-225ENST00000591535 ZGPATQ8N5A5 531 aaKnown RBP17.23■□□□□ 0.35
MBD1-225ENST00000591535 TRPM4Q8TD43 1214 aa17.23■□□□□ 0.35
MBD1-225ENST00000591535 EGFRP00533 1210 aa17.22■□□□□ 0.35
MBD1-225ENST00000591535 LDHBP07195 334 aaKnown RBP17.22■□□□□ 0.35
MBD1-225ENST00000591535 GRIK5Q16478 980 aa17.22■□□□□ 0.35
MBD1-225ENST00000591535 ZNF512BQ96KM6 892 aaPredicted RBP17.22■□□□□ 0.35
MBD1-225ENST00000591535 PDS5AQ29RF7 1337 aaKnown RBP17.22■□□□□ 0.35
MBD1-225ENST00000591535 HIRAP54198 1017 aaPredicted RBP17.21■□□□□ 0.35
MBD1-225ENST00000591535 SPTY2D1Q68D10 685 aaPredicted RBP17.21■□□□□ 0.35
MBD1-225ENST00000591535 TBC1D9Q6ZT07 1266 aa17.21■□□□□ 0.35
MBD1-225ENST00000591535 LDHDQ86WU2 507 aa17.21■□□□□ 0.35
MBD1-225ENST00000591535 SMC5Q8IY18 1101 aa17.21■□□□□ 0.35
MBD1-225ENST00000591535 SUGT1Q9Y2Z0 365 aa17.21■□□□□ 0.35
MBD1-225ENST00000591535 ZBTB22O15209 634 aa17.21■□□□□ 0.35
MBD1-225ENST00000591535 DLGAP5Q15398 846 aa17.21■□□□□ 0.35
MBD1-225ENST00000591535 GPATCH3Q96I76 525 aa17.21■□□□□ 0.35
MBD1-225ENST00000591535 SALL1Q9NSC2 1324 aa17.21■□□□□ 0.35
MBD1-225ENST00000591535 MAST3O60307 1309 aa17.2■□□□□ 0.34
MBD1-225ENST00000591535 PRDX5P30044 214 aa17.2■□□□□ 0.34
MBD1-225ENST00000591535 ZAP70P43403 619 aa17.2■□□□□ 0.34
MBD1-225ENST00000591535 CFAP100Q494V2 611 aa17.2■□□□□ 0.34
MBD1-225ENST00000591535 CHADLQ6NUI6 762 aa17.2■□□□□ 0.34
MBD1-225ENST00000591535 RBM46Q8TBY0 533 aaKnown RBP17.2■□□□□ 0.34
MBD1-225ENST00000591535 LRP2BPQ9P2M1 347 aa17.2■□□□□ 0.34
MBD1-225ENST00000591535 NDUFB9Q9Y6M9 179 aa17.2■□□□□ 0.34
MBD1-225ENST00000591535 AKAP11Q9UKA4 1901 aa17.2■□□□□ 0.34
MBD1-225ENST00000591535 MAP1SQ66K74 1059 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms