RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 POLR2AP24928 1970 aaKnown RBP20.47■□□□□ 0.87
GCDH-213ENST00000590627 G3V3G9 751 aa20.47■□□□□ 0.87
GCDH-213ENST00000590627 NOGQ13253 232 aa20.47■□□□□ 0.87
GCDH-213ENST00000590627 G3BP1Q13283 466 aaKnown RBP eCLIP20.47■□□□□ 0.87
GCDH-213ENST00000590627 DCAF8Q5TAQ9 597 aa20.47■□□□□ 0.87
GCDH-213ENST00000590627 KRT26Q7Z3Y9 468 aa20.47■□□□□ 0.87
GCDH-213ENST00000590627 ERC1Q8IUD2 1116 aa20.47■□□□□ 0.87
GCDH-213ENST00000590627 DCPSQ96C86 337 aaKnown RBP20.47■□□□□ 0.87
GCDH-213ENST00000590627 EGFRP00533 1210 aa20.46■□□□□ 0.87
GCDH-213ENST00000590627 IGHMBP2P38935 993 aaKnown RBP20.46■□□□□ 0.87
GCDH-213ENST00000590627 IL15P40933 162 aaPredicted RBP20.46■□□□□ 0.87
GCDH-213ENST00000590627 HUNKP57058 714 aa20.46■□□□□ 0.87
GCDH-213ENST00000590627 ATG9AQ7Z3C6 839 aa20.46■□□□□ 0.87
GCDH-213ENST00000590627 ANKRD18AQ8IVF6 992 aa20.46■□□□□ 0.87
GCDH-213ENST00000590627 RIPOR2Q9Y4F9 1068 aa20.46■□□□□ 0.87
GCDH-213ENST00000590627 PSME4Q14997 1843 aa20.46■□□□□ 0.87
GCDH-213ENST00000590627 NUCB1Q02818 461 aa20.45■□□□□ 0.86
GCDH-213ENST00000590627 KIF4BQ2VIQ3 1234 aa20.45■□□□□ 0.86
GCDH-213ENST00000590627 LDHAL6AQ6ZMR3 332 aa20.45■□□□□ 0.86
GCDH-213ENST00000590627 PUS3Q9BZE2 481 aaKnown RBP20.45■□□□□ 0.86
GCDH-213ENST00000590627 SIL1Q9H173 461 aa20.45■□□□□ 0.86
GCDH-213ENST00000590627 BSDC1Q9NW68 430 aaPredicted RBP20.45■□□□□ 0.86
GCDH-213ENST00000590627 XDHP47989 1333 aa20.45■□□□□ 0.86
GCDH-213ENST00000590627 LRRC24Q50LG9 513 aa20.44■□□□□ 0.86
GCDH-213ENST00000590627 RBM26Q5T8P6 1007 aaKnown RBP20.44■□□□□ 0.86
GCDH-213ENST00000590627 C2orf69Q8N8R5 385 aa20.44■□□□□ 0.86
GCDH-213ENST00000590627 AGBL3Q8NEM8 1001 aa20.44■□□□□ 0.86
GCDH-213ENST00000590627 KIF1BPQ96EK5 621 aa20.44■□□□□ 0.86
GCDH-213ENST00000590627 MPHOSPH8Q99549 860 aa20.44■□□□□ 0.86
GCDH-213ENST00000590627 GBA2Q9HCG7 927 aaPredicted RBP20.44■□□□□ 0.86
GCDH-213ENST00000590627 SASH1O94885 1247 aa20.43■□□□□ 0.86
GCDH-213ENST00000590627 ATP2B4P23634 1241 aa20.43■□□□□ 0.86
GCDH-213ENST00000590627 OS9Q13438 667 aaPredicted RBP20.43■□□□□ 0.86
GCDH-213ENST00000590627 RSBN1LQ6PCB5 846 aaPredicted RBP20.43■□□□□ 0.86
GCDH-213ENST00000590627 RHPN1Q8TCX5 695 aa20.43■□□□□ 0.86
GCDH-213ENST00000590627 LRRCC1Q9C099 1032 aa20.43■□□□□ 0.86
GCDH-213ENST00000590627 TSKSQ9UJT2 592 aa20.43■□□□□ 0.86
GCDH-213ENST00000590627 ZNF280AP59817 542 aaPredicted RBP20.42■□□□□ 0.86
GCDH-213ENST00000590627 ANKRD45Q5TZF3 282 aa20.42■□□□□ 0.86
GCDH-213ENST00000590627 DLK2Q6UY11 383 aa20.42■□□□□ 0.86
GCDH-213ENST00000590627 PODNQ7Z5L7 613 aa20.42■□□□□ 0.86
GCDH-213ENST00000590627 SULF1Q8IWU6 871 aa20.42■□□□□ 0.86
GCDH-213ENST00000590627 CNNM1Q9NRU3 951 aa20.42■□□□□ 0.86
GCDH-213ENST00000590627 ADM5C9JUS6 153 aa20.41■□□□□ 0.86
GCDH-213ENST00000590627 RGMBQ6NW40 437 aa20.41■□□□□ 0.86
GCDH-213ENST00000590627 CHD1LQ86WJ1 897 aa20.41■□□□□ 0.86
GCDH-213ENST00000590627 CCDC102AQ96A19 550 aa20.41■□□□□ 0.86
GCDH-213ENST00000590627 GGA3Q9NZ52 723 aa20.41■□□□□ 0.86
GCDH-213ENST00000590627 MROH5Q6ZUA9 1318 aa20.41■□□□□ 0.86
GCDH-213ENST00000590627 GPR108Q9NPR9 543 aa20.4■□□□□ 0.86
GCDH-213ENST00000590627 MED23Q9ULK4 1368 aa20.39■□□□□ 0.85
GCDH-213ENST00000590627 FAM155AB1AL88 458 aaPredicted RBP20.39■□□□□ 0.85
GCDH-213ENST00000590627 APBB1O00213 710 aa20.39■□□□□ 0.85
GCDH-213ENST00000590627 VGLL2Q8N8G2 317 aa20.39■□□□□ 0.85
GCDH-213ENST00000590627 ZIC5Q96T25 663 aa20.39■□□□□ 0.85
GCDH-213ENST00000590627 GMLQ99445 158 aa20.39■□□□□ 0.85
GCDH-213ENST00000590627 CEP126Q9P2H0 1117 aa20.39■□□□□ 0.85
GCDH-213ENST00000590627 MINPP1Q9UNW1 487 aa20.39■□□□□ 0.85
GCDH-213ENST00000590627 CASP8AP2Q9UKL3 1982 aa20.39■□□□□ 0.85
GCDH-213ENST00000590627 USP17L3A6NCW0 530 aa20.38■□□□□ 0.85
GCDH-213ENST00000590627 USP17L4A6NCW7 530 aa20.38■□□□□ 0.85
GCDH-213ENST00000590627 USP17L8P0C7I0 530 aa20.38■□□□□ 0.85
GCDH-213ENST00000590627 TFCP2Q12800 502 aa20.38■□□□□ 0.85
GCDH-213ENST00000590627 METTL24Q5JXM2 366 aa20.38■□□□□ 0.85
GCDH-213ENST00000590627 USP17L1Q7RTZ2 530 aa20.38■□□□□ 0.85
GCDH-213ENST00000590627 ZBTB47Q9UFB7 747 aaPredicted RBP20.38■□□□□ 0.85
GCDH-213ENST00000590627 PITPNM2Q9BZ72 1349 aa20.37■□□□□ 0.85
GCDH-213ENST00000590627 SMARCA5O60264 1052 aaPredicted RBP20.37■□□□□ 0.85
GCDH-213ENST00000590627 CHRNDQ07001 517 aa20.37■□□□□ 0.85
GCDH-213ENST00000590627 CLASRPQ8N2M8 674 aaKnown RBP20.37■□□□□ 0.85
GCDH-213ENST00000590627 ANKRD2Q9GZV1 360 aa20.37■□□□□ 0.85
GCDH-213ENST00000590627 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.37■□□□□ 0.85
GCDH-213ENST00000590627 ASTN2O75129 1339 aaPredicted RBP20.36■□□□□ 0.85
GCDH-213ENST00000590627 PDE8BO95263 885 aa20.36■□□□□ 0.85
GCDH-213ENST00000590627 ZNF157P51786 506 aaPredicted RBP20.36■□□□□ 0.85
GCDH-213ENST00000590627 SCARF1Q14162 830 aa20.36■□□□□ 0.85
GCDH-213ENST00000590627 ANGEL2Q5VTE6 544 aaKnown RBP20.36■□□□□ 0.85
GCDH-213ENST00000590627 CDCA5Q96FF9 252 aa20.36■□□□□ 0.85
GCDH-213ENST00000590627 LNPKQ9C0E8 428 aa20.36■□□□□ 0.85
GCDH-213ENST00000590627 IL1RAPL2Q9NP60 686 aa20.36■□□□□ 0.85
GCDH-213ENST00000590627 MYOZ2Q9NPC6 264 aa20.36■□□□□ 0.85
GCDH-213ENST00000590627 SAGE1Q9NXZ1 904 aa20.36■□□□□ 0.85
GCDH-213ENST00000590627 AKAP2Q9Y2D5 859 aa20.36■□□□□ 0.85
GCDH-213ENST00000590627 SPEF2Q9C093 1822 aa20.36■□□□□ 0.85
GCDH-213ENST00000590627 CCDC85CA6NKD9 419 aa20.35■□□□□ 0.85
GCDH-213ENST00000590627 FKBP1BP68106 108 aa20.35■□□□□ 0.85
GCDH-213ENST00000590627 TNNI3KQ59H18 835 aa20.35■□□□□ 0.85
GCDH-213ENST00000590627 MCOLN1Q9GZU1 580 aa20.35■□□□□ 0.85
GCDH-213ENST00000590627 FPGT-TNNI3KV9GXZ4 949 aa20.35■□□□□ 0.85
GCDH-213ENST00000590627 SLC10A3P09131 477 aa20.34■□□□□ 0.85
GCDH-213ENST00000590627 KIF23Q02241 960 aaPredicted RBP20.34■□□□□ 0.85
GCDH-213ENST00000590627 EAF2Q96CJ1 260 aaPredicted RBP20.34■□□□□ 0.85
GCDH-213ENST00000590627 MYO3BQ8WXR4 1341 aa20.33■□□□□ 0.85
GCDH-213ENST00000590627 FGFR2P21802 821 aa20.33■□□□□ 0.85
GCDH-213ENST00000590627 RGS19P49795 217 aa20.33■□□□□ 0.85
GCDH-213ENST00000590627 MMP14P50281 582 aa20.33■□□□□ 0.85
GCDH-213ENST00000590627 PUM3Q15397 648 aaKnown RBP20.33■□□□□ 0.85
GCDH-213ENST00000590627 COA1Q9GZY4 146 aa20.33■□□□□ 0.85
GCDH-213ENST00000590627 LEMD3Q9Y2U8 911 aa20.33■□□□□ 0.85
GCDH-213ENST00000590627 ZNF646O15015 1829 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms