RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 FBXO33Q7Z6M2 555 aa15.76■□□□□ 0.11
DDX39A-213ENST00000590315 GPATCH3Q96I76 525 aa15.76■□□□□ 0.11
DDX39A-213ENST00000590315 DBNLQ9UJU6 430 aaKnown RBP15.76■□□□□ 0.11
DDX39A-213ENST00000590315 ECM29Q5VYK3 1845 aa15.75■□□□□ 0.11
DDX39A-213ENST00000590315 UQCRFS1P1P0C7P4 283 aa15.75■□□□□ 0.11
DDX39A-213ENST00000590315 IL1R1P14778 569 aa15.75■□□□□ 0.11
DDX39A-213ENST00000590315 LNPKQ9C0E8 428 aa15.75■□□□□ 0.11
DDX39A-213ENST00000590315 DOCK2Q92608 1830 aa15.75■□□□□ 0.11
DDX39A-213ENST00000590315 GLTPD2A6NH11 291 aa15.74■□□□□ 0.11
DDX39A-213ENST00000590315 LMOD1P29536 600 aaPredicted RBP15.74■□□□□ 0.11
DDX39A-213ENST00000590315 SMC5Q8IY18 1101 aa15.74■□□□□ 0.11
DDX39A-213ENST00000590315 GPC2Q8N158 579 aa15.74■□□□□ 0.11
DDX39A-213ENST00000590315 TDRD7Q8NHU6 1098 aaKnown RBP15.74■□□□□ 0.11
DDX39A-213ENST00000590315 MXD3Q9BW11 206 aa15.74■□□□□ 0.11
DDX39A-213ENST00000590315 DENND2AQ9ULE3 1009 aa15.74■□□□□ 0.11
DDX39A-213ENST00000590315 ZBTB12Q9Y330 459 aaPredicted RBP15.74■□□□□ 0.11
DDX39A-213ENST00000590315 UTRNP46939 3433 aa15.74■□□□□ 0.11
DDX39A-213ENST00000590315 COL1A1P02452 1464 aaPredicted RBP15.73■□□□□ 0.11
DDX39A-213ENST00000590315 F8W031 263 aaPredicted RBP15.73■□□□□ 0.11
DDX39A-213ENST00000590315 GMPSP49915 693 aaPredicted RBP15.73■□□□□ 0.11
DDX39A-213ENST00000590315 STRIP1Q5VSL9 837 aa15.73■□□□□ 0.11
DDX39A-213ENST00000590315 RASGRF1Q13972 1273 aa15.72■□□□□ 0.11
DDX39A-213ENST00000590315 MFSD14BQ5SR56 506 aa15.72■□□□□ 0.11
DDX39A-213ENST00000590315 RSBN1LQ6PCB5 846 aaPredicted RBP15.72■□□□□ 0.11
DDX39A-213ENST00000590315 SNRKQ9NRH2 765 aa15.72■□□□□ 0.11
DDX39A-213ENST00000590315 PPP4R2Q9NY27 417 aa15.72■□□□□ 0.11
DDX39A-213ENST00000590315 MYO3BQ8WXR4 1341 aa15.71■□□□□ 0.11
DDX39A-213ENST00000590315 SEMA3EO15041 775 aa15.71■□□□□ 0.11
DDX39A-213ENST00000590315 ARID4AP29374 1257 aaPredicted RBP15.71■□□□□ 0.11
DDX39A-213ENST00000590315 DACT2Q5SW24 774 aa15.71■□□□□ 0.11
DDX39A-213ENST00000590315 ERICH6BQ5W0A0 696 aa15.71■□□□□ 0.11
DDX39A-213ENST00000590315 CENPQQ7L2Z9 268 aaPredicted RBP15.71■□□□□ 0.11
DDX39A-213ENST00000590315 CHD1LQ86WJ1 897 aa15.71■□□□□ 0.11
DDX39A-213ENST00000590315 KIAA0825Q8IV33 1275 aa15.71■□□□□ 0.11
DDX39A-213ENST00000590315 C16orf71Q8IYS4 520 aaPredicted RBP15.71■□□□□ 0.11
DDX39A-213ENST00000590315 SPATA5Q8NB90 893 aa15.71■□□□□ 0.11
DDX39A-213ENST00000590315 DNAJC2Q99543 621 aaKnown RBP15.71■□□□□ 0.11
DDX39A-213ENST00000590315 GPBP1L1Q9HC44 474 aaPredicted RBP15.71■□□□□ 0.11
DDX39A-213ENST00000590315 ABCF2Q9UG63 623 aa15.71■□□□□ 0.11
DDX39A-213ENST00000590315 FAM205AQ6ZU69 1335 aa15.7■□□□□ 0.1
DDX39A-213ENST00000590315 VIL1P09327 827 aaKnown RBP15.7■□□□□ 0.1
DDX39A-213ENST00000590315 MCAMP43121 646 aa15.7■□□□□ 0.1
DDX39A-213ENST00000590315 NUCB1Q02818 461 aa15.7■□□□□ 0.1
DDX39A-213ENST00000590315 SCARF1Q14162 830 aa15.7■□□□□ 0.1
DDX39A-213ENST00000590315 TSHZ3Q63HK5 1081 aa15.7■□□□□ 0.1
DDX39A-213ENST00000590315 PI16Q6UXB8 463 aa15.7■□□□□ 0.1
DDX39A-213ENST00000590315 WDR66Q8TBY9 1149 aa15.7■□□□□ 0.1
DDX39A-213ENST00000590315 TBC1D22AQ8WUA7 517 aa15.7■□□□□ 0.1
DDX39A-213ENST00000590315 RRAGCQ9HB90 399 aa15.7■□□□□ 0.1
DDX39A-213ENST00000590315 POLR2AP24928 1970 aaKnown RBP15.69■□□□□ 0.1
DDX39A-213ENST00000590315 MX1P20591 662 aa15.69■□□□□ 0.1
DDX39A-213ENST00000590315 RPS12P25398 132 aaKnown RBP15.69■□□□□ 0.1
DDX39A-213ENST00000590315 MICALL2Q8IY33 904 aa15.69■□□□□ 0.1
DDX39A-213ENST00000590315 OTUD7AQ8TE49 926 aaPredicted RBP15.69■□□□□ 0.1
DDX39A-213ENST00000590315 BOLA2Q9H3K6 86 aa15.69■□□□□ 0.1
DDX39A-213ENST00000590315 ECHDC1Q9NTX5 307 aa15.69■□□□□ 0.1
DDX39A-213ENST00000590315 HMG20BQ9P0W2 317 aa15.69■□□□□ 0.1
DDX39A-213ENST00000590315 HACL1Q9UJ83 578 aa15.69■□□□□ 0.1
DDX39A-213ENST00000590315 HDAC9Q9UKV0 1011 aa15.69■□□□□ 0.1
DDX39A-213ENST00000590315 NDUFB9Q9Y6M9 179 aa15.69■□□□□ 0.1
DDX39A-213ENST00000590315 IQCA1LA6NCM1 817 aa15.68■□□□□ 0.1
DDX39A-213ENST00000590315 H7C1D1 291 aa15.68■□□□□ 0.1
DDX39A-213ENST00000590315 ZAP70P43403 619 aa15.68■□□□□ 0.1
DDX39A-213ENST00000590315 EAPPQ56P03 285 aaPredicted RBP15.68■□□□□ 0.1
DDX39A-213ENST00000590315 RBM26Q5T8P6 1007 aaKnown RBP15.68■□□□□ 0.1
DDX39A-213ENST00000590315 DZIP1Q86YF9 867 aaKnown RBP15.68■□□□□ 0.1
DDX39A-213ENST00000590315 OGFOD1Q8N543 542 aa15.68■□□□□ 0.1
DDX39A-213ENST00000590315 ZGPATQ8N5A5 531 aaKnown RBP15.68■□□□□ 0.1
DDX39A-213ENST00000590315 AGBL3Q8NEM8 1001 aa15.68■□□□□ 0.1
DDX39A-213ENST00000590315 NMRK2Q9NPI5 230 aa15.68■□□□□ 0.1
DDX39A-213ENST00000590315 CNOT7Q9UIV1 285 aaKnown RBP15.68■□□□□ 0.1
DDX39A-213ENST00000590315 SHTN1A0MZ66 631 aa15.67■□□□□ 0.1
DDX39A-213ENST00000590315 ERC2O15083 957 aa15.67■□□□□ 0.1
DDX39A-213ENST00000590315 LDHBP07195 334 aaKnown RBP15.67■□□□□ 0.1
DDX39A-213ENST00000590315 USP17L8P0C7I0 530 aa15.67■□□□□ 0.1
DDX39A-213ENST00000590315 SCNN1DP51172 638 aa15.67■□□□□ 0.1
DDX39A-213ENST00000590315 RBM5P52756 815 aaKnown RBP eCLIP15.67■□□□□ 0.14e-7■□□□□ 8.1
DDX39A-213ENST00000590315 CERS5Q8N5B7 392 aa15.67■□□□□ 0.1
DDX39A-213ENST00000590315 GPRC5DQ9NZD1 345 aa15.67■□□□□ 0.1
DDX39A-213ENST00000590315 RAI14Q9P0K7 980 aa15.67■□□□□ 0.1
DDX39A-213ENST00000590315 LRP2BPQ9P2M1 347 aa15.67■□□□□ 0.1
DDX39A-213ENST00000590315 TTF2Q9UNY4 1162 aaKnown RBP15.67■□□□□ 0.1
DDX39A-213ENST00000590315 MAST3O60307 1309 aa15.67■□□□□ 0.1
DDX39A-213ENST00000590315 TTC41PQ6P2S7 1318 aa15.67■□□□□ 0.1
DDX39A-213ENST00000590315 GOLIM4O00461 696 aa15.66■□□□□ 0.1
DDX39A-213ENST00000590315 EPHX2P34913 555 aa15.66■□□□□ 0.1
DDX39A-213ENST00000590315 EPS15P42566 896 aa15.66■□□□□ 0.1
DDX39A-213ENST00000590315 FKBP1AP62942 108 aaKnown RBP15.66■□□□□ 0.1
DDX39A-213ENST00000590315 TBC1D10BQ4KMP7 808 aaPredicted RBP15.66■□□□□ 0.1
DDX39A-213ENST00000590315 SPTY2D1Q68D10 685 aaPredicted RBP15.66■□□□□ 0.1
DDX39A-213ENST00000590315 TBC1D9Q6ZT07 1266 aa15.66■□□□□ 0.1
DDX39A-213ENST00000590315 ERICH6Q7L0X2 663 aa15.66■□□□□ 0.1
DDX39A-213ENST00000590315 L3MBTL3Q96JM7 780 aaPredicted RBP15.66■□□□□ 0.1
DDX39A-213ENST00000590315 ZNF512BQ96KM6 892 aaPredicted RBP15.66■□□□□ 0.1
DDX39A-213ENST00000590315 PDS5AQ29RF7 1337 aaKnown RBP15.66■□□□□ 0.1
DDX39A-213ENST00000590315 CDK5RAP2Q96SN8 1893 aa15.65■□□□□ 0.1
DDX39A-213ENST00000590315 MAP4K4O95819 1239 aaPredicted RBP15.65■□□□□ 0.1
DDX39A-213ENST00000590315 VEGFAP15692 232 aaPredicted RBP15.65■□□□□ 0.1
DDX39A-213ENST00000590315 ATP5JP18859 108 aa15.65■□□□□ 0.1
DDX39A-213ENST00000590315 PRDX5P30044 214 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms