RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 FAM205AQ6ZU69 1335 aa26.24■■□□□ 1.79
ATG4D-212ENST00000590096 TNNI3KQ59H18 835 aa26.24■■□□□ 1.79
ATG4D-212ENST00000590096 GORABQ5T7V8 394 aa26.24■■□□□ 1.79
ATG4D-212ENST00000590096 USP50Q70EL3 339 aaPredicted RBP26.24■■□□□ 1.79
ATG4D-212ENST00000590096 GMLQ99445 158 aa26.24■■□□□ 1.79
ATG4D-212ENST00000590096 FPGT-TNNI3KV9GXZ4 949 aa26.24■■□□□ 1.79
ATG4D-212ENST00000590096 MYH13Q9UKX3 1938 aa26.24■■□□□ 1.79
ATG4D-212ENST00000590096 SHTN1A0MZ66 631 aa26.23■■□□□ 1.79
ATG4D-212ENST00000590096 RAB11FIP3O75154 756 aa26.23■■□□□ 1.79
ATG4D-212ENST00000590096 USP17L8P0C7I0 530 aa26.23■■□□□ 1.79
ATG4D-212ENST00000590096 FKBP1AP62942 108 aaKnown RBP26.23■■□□□ 1.79
ATG4D-212ENST00000590096 CHAF1AQ13111 956 aaPredicted RBP26.23■■□□□ 1.79
ATG4D-212ENST00000590096 CLEC11AQ9Y240 323 aa26.23■■□□□ 1.79
ATG4D-212ENST00000590096 APBB1O00213 710 aa26.22■■□□□ 1.79
ATG4D-212ENST00000590096 PHKA1P46020 1223 aa26.22■■□□□ 1.79
ATG4D-212ENST00000590096 CCDC102BQ68D86 513 aa26.22■■□□□ 1.79
ATG4D-212ENST00000590096 LDHDQ86WU2 507 aa26.22■■□□□ 1.79
ATG4D-212ENST00000590096 OGFOD1Q8N543 542 aa26.22■■□□□ 1.79
ATG4D-212ENST00000590096 SMC1BQ8NDV3 1235 aa26.22■■□□□ 1.79
ATG4D-212ENST00000590096 KIF1BPQ96EK5 621 aa26.22■■□□□ 1.79
ATG4D-212ENST00000590096 PCDHB15Q9Y5E8 787 aa26.22■■□□□ 1.79
ATG4D-212ENST00000590096 MFSD14BQ5SR56 506 aa26.21■■□□□ 1.79
ATG4D-212ENST00000590096 EXOC6Q8TAG9 804 aa26.21■■□□□ 1.79
ATG4D-212ENST00000590096 RHPN1Q8TCX5 695 aa26.21■■□□□ 1.79
ATG4D-212ENST00000590096 HDAC9Q9UKV0 1011 aa26.21■■□□□ 1.79
ATG4D-212ENST00000590096 POTEIP0CG38 1075 aa26.2■■□□□ 1.78
ATG4D-212ENST00000590096 POTEJP0CG39 1038 aa26.2■■□□□ 1.78
ATG4D-212ENST00000590096 MMP14P50281 582 aa26.2■■□□□ 1.78
ATG4D-212ENST00000590096 SAMD7Q7Z3H4 446 aa26.2■■□□□ 1.78
ATG4D-212ENST00000590096 KIAA0825Q8IV33 1275 aa26.2■■□□□ 1.78
ATG4D-212ENST00000590096 TBC1D22AQ8WUA7 517 aa26.2■■□□□ 1.78
ATG4D-212ENST00000590096 SEMA3EO15041 775 aa26.19■■□□□ 1.78
ATG4D-212ENST00000590096 ZNF280AP59817 542 aaPredicted RBP26.19■■□□□ 1.78
ATG4D-212ENST00000590096 TBC1D10BQ4KMP7 808 aaPredicted RBP26.19■■□□□ 1.78
ATG4D-212ENST00000590096 RBM26Q5T8P6 1007 aaKnown RBP26.19■■□□□ 1.78
ATG4D-212ENST00000590096 CERS5Q8N5B7 392 aa26.19■■□□□ 1.78
ATG4D-212ENST00000590096 TRPM4Q8TD43 1214 aa26.19■■□□□ 1.78
ATG4D-212ENST00000590096 DENND2AQ9ULE3 1009 aa26.19■■□□□ 1.78
ATG4D-212ENST00000590096 FSTL1Q12841 308 aa26.18■■□□□ 1.78
ATG4D-212ENST00000590096 KIF4BQ2VIQ3 1234 aa26.18■■□□□ 1.78
ATG4D-212ENST00000590096 CHADLQ6NUI6 762 aa26.18■■□□□ 1.78
ATG4D-212ENST00000590096 IL1RAPL2Q9NP60 686 aa26.18■■□□□ 1.78
ATG4D-212ENST00000590096 ADAMTSL1Q8N6G6 1762 aa26.18■■□□□ 1.78
ATG4D-212ENST00000590096 IRX6P78412 446 aaPredicted RBP26.17■■□□□ 1.78
ATG4D-212ENST00000590096 CCDC158Q5M9N0 1113 aa26.17■■□□□ 1.78
ATG4D-212ENST00000590096 AACSQ86V21 672 aa26.17■■□□□ 1.78
ATG4D-212ENST00000590096 CLASRPQ8N2M8 674 aaKnown RBP26.17■■□□□ 1.78
ATG4D-212ENST00000590096 WDR66Q8TBY9 1149 aa26.17■■□□□ 1.78
ATG4D-212ENST00000590096 EAF2Q96CJ1 260 aaPredicted RBP26.17■■□□□ 1.78
ATG4D-212ENST00000590096 DBNDD2Q9BQY9 259 aa26.17■■□□□ 1.78
ATG4D-212ENST00000590096 MYOZ2Q9NPC6 264 aa26.17■■□□□ 1.78
ATG4D-212ENST00000590096 F8W031 263 aaPredicted RBP26.16■■□□□ 1.78
ATG4D-212ENST00000590096 CCDC8Q9H0W5 538 aaPredicted RBP26.16■■□□□ 1.78
ATG4D-212ENST00000590096 DCTPP1Q9H773 170 aa26.16■■□□□ 1.78
ATG4D-212ENST00000590096 ZBTB22O15209 634 aa26.15■■□□□ 1.78
ATG4D-212ENST00000590096 UQCRFS1P1P0C7P4 283 aa26.15■■□□□ 1.78
ATG4D-212ENST00000590096 TTC39AQ5SRH9 613 aa26.15■■□□□ 1.78
ATG4D-212ENST00000590096 LRRCC1Q9C099 1032 aa26.15■■□□□ 1.78
ATG4D-212ENST00000590096 BCL11AQ9H165 835 aa26.15■■□□□ 1.78
ATG4D-212ENST00000590096 COL1A1P02452 1464 aaPredicted RBP26.15■■□□□ 1.78
ATG4D-212ENST00000590096 EGFRP00533 1210 aa26.14■■□□□ 1.78
ATG4D-212ENST00000590096 HIRAP54198 1017 aaPredicted RBP26.14■■□□□ 1.78
ATG4D-212ENST00000590096 RASGRF1Q13972 1273 aa26.14■■□□□ 1.78
ATG4D-212ENST00000590096 ZC3H15Q8WU90 426 aaKnown RBP26.14■■□□□ 1.78
ATG4D-212ENST00000590096 DBNLQ9UJU6 430 aaKnown RBP26.14■■□□□ 1.78
ATG4D-212ENST00000590096 ARID4AP29374 1257 aaPredicted RBP26.13■■□□□ 1.77
ATG4D-212ENST00000590096 TTF2Q9UNY4 1162 aaKnown RBP26.13■■□□□ 1.77
ATG4D-212ENST00000590096 PDS5AQ29RF7 1337 aaKnown RBP26.13■■□□□ 1.77
ATG4D-212ENST00000590096 IFIT2P09913 472 aaKnown RBP26.12■■□□□ 1.77
ATG4D-212ENST00000590096 TLR7Q9NYK1 1049 aaKnown RBP26.12■■□□□ 1.77
ATG4D-212ENST00000590096 SUGT1Q9Y2Z0 365 aa26.12■■□□□ 1.77
ATG4D-212ENST00000590096 HDAC1Q13547 482 aaPredicted RBP26.11■■□□□ 1.77
ATG4D-212ENST00000590096 MAP1SQ66K74 1059 aaPredicted RBP26.11■■□□□ 1.77
ATG4D-212ENST00000590096 ZGPATQ8N5A5 531 aaKnown RBP26.11■■□□□ 1.77
ATG4D-212ENST00000590096 MAST3O60307 1309 aa26.11■■□□□ 1.77
ATG4D-212ENST00000590096 SALL1Q9NSC2 1324 aa26.11■■□□□ 1.77
ATG4D-212ENST00000590096 CENPBP07199 599 aaPredicted RBP26.1■■□□□ 1.77
ATG4D-212ENST00000590096 SCARF1Q14162 830 aa26.1■■□□□ 1.77
ATG4D-212ENST00000590096 SPATA5Q8NB90 893 aa26.1■■□□□ 1.77
ATG4D-212ENST00000590096 RBM5P52756 815 aaKnown RBP eCLIP26.09■■□□□ 1.77
ATG4D-212ENST00000590096 DLGAP5Q15398 846 aa26.09■■□□□ 1.77
ATG4D-212ENST00000590096 CNTROBQ8N137 903 aa26.09■■□□□ 1.77
ATG4D-212ENST00000590096 RWDD1Q9H446 243 aaPredicted RBP26.09■■□□□ 1.77
ATG4D-212ENST00000590096 HMG20BQ9P0W2 317 aa26.09■■□□□ 1.77
ATG4D-212ENST00000590096 PGAP2Q9UHJ9 254 aa26.09■■□□□ 1.77
ATG4D-212ENST00000590096 MCAMP43121 646 aa26.08■■□□□ 1.77
ATG4D-212ENST00000590096 GRIK5Q16478 980 aa26.08■■□□□ 1.77
ATG4D-212ENST00000590096 CFAP100Q494V2 611 aa26.08■■□□□ 1.77
ATG4D-212ENST00000590096 DCPSQ96C86 337 aaKnown RBP26.08■■□□□ 1.77
ATG4D-212ENST00000590096 ZNF512BQ96KM6 892 aaPredicted RBP26.08■■□□□ 1.77
ATG4D-212ENST00000590096 WNT10BO00744 389 aa26.07■■□□□ 1.76
ATG4D-212ENST00000590096 SMARCA5O60264 1052 aaPredicted RBP26.07■■□□□ 1.76
ATG4D-212ENST00000590096 LDHBP07195 334 aaKnown RBP26.07■■□□□ 1.76
ATG4D-212ENST00000590096 MTMR14Q8NCE2 650 aa26.07■■□□□ 1.76
ATG4D-212ENST00000590096 GGA3Q9NZ52 723 aa26.07■■□□□ 1.76
ATG4D-212ENST00000590096 ABCF2Q9UG63 623 aa26.07■■□□□ 1.76
ATG4D-212ENST00000590096 SERPINA10Q9UK55 444 aa26.07■■□□□ 1.76
ATG4D-212ENST00000590096 APLP1P51693 650 aa26.06■■□□□ 1.76
ATG4D-212ENST00000590096 NBPF9Q3BBW0 867 aa26.06■■□□□ 1.76
ATG4D-212ENST00000590096 SPTY2D1Q68D10 685 aaPredicted RBP26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms