RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 TFCP2L1Q9NZI6 479 aa9.09□□□□□ -0.95
SMAD4-210ENST00000590061 RREB1Q92766 1687 aa9.08□□□□□ -0.96
SMAD4-210ENST00000590061 ANXA1P04083 346 aa9.08□□□□□ -0.96
SMAD4-210ENST00000590061 PCCAP05165 728 aaPredicted RBP9.08□□□□□ -0.96
SMAD4-210ENST00000590061 IRX6P78412 446 aaPredicted RBP9.08□□□□□ -0.96
SMAD4-210ENST00000590061 TPTE2Q6XPS3 522 aa9.08□□□□□ -0.96
SMAD4-210ENST00000590061 DEFB132Q7Z7B7 95 aa9.08□□□□□ -0.96
SMAD4-210ENST00000590061 ERC1Q8IUD2 1116 aa9.08□□□□□ -0.96
SMAD4-210ENST00000590061 ANKRD44Q8N8A2 993 aa9.08□□□□□ -0.96
SMAD4-210ENST00000590061 SLC16A10Q8TF71 515 aa9.08□□□□□ -0.96
SMAD4-210ENST00000590061 UTP14AQ9BVJ6 771 aaKnown RBP9.08□□□□□ -0.96
SMAD4-210ENST00000590061 TBC1D2Q9BYX2 928 aa9.08□□□□□ -0.96
SMAD4-210ENST00000590061 ZBTB3Q9H5J0 574 aa9.08□□□□□ -0.96
SMAD4-210ENST00000590061 N4BP2Q86UW6 1770 aaPredicted RBP9.08□□□□□ -0.96
SMAD4-210ENST00000590061 COL5A3P25940 1745 aaPredicted RBP9.08□□□□□ -0.96
SMAD4-210ENST00000590061 TJP1Q07157 1748 aa9.08□□□□□ -0.96
SMAD4-210ENST00000590061 H7C1W4 665 aa9.07□□□□□ -0.96
SMAD4-210ENST00000590061 RAB11FIP3O75154 756 aa9.07□□□□□ -0.96
SMAD4-210ENST00000590061 CAMTA2O94983 1202 aa9.07□□□□□ -0.96
SMAD4-210ENST00000590061 GTF2E1P29083 439 aaPredicted RBP9.07□□□□□ -0.96
SMAD4-210ENST00000590061 GJA5P36382 358 aa9.07□□□□□ -0.96
SMAD4-210ENST00000590061 ATP8B2P98198 1209 aa9.07□□□□□ -0.96
SMAD4-210ENST00000590061 TRIM32Q13049 653 aa9.07□□□□□ -0.96
SMAD4-210ENST00000590061 MTX1Q13505 466 aa9.07□□□□□ -0.96
SMAD4-210ENST00000590061 RSBN1LQ6PCB5 846 aaPredicted RBP9.07□□□□□ -0.96
SMAD4-210ENST00000590061 TTLL7Q6ZT98 887 aa9.07□□□□□ -0.96
SMAD4-210ENST00000590061 ZNF34Q8IZ26 560 aa9.07□□□□□ -0.96
SMAD4-210ENST00000590061 CAMKK2Q96RR4 588 aa9.07□□□□□ -0.96
SMAD4-210ENST00000590061 TBC1D2BQ9UPU7 963 aa9.07□□□□□ -0.96
SMAD4-210ENST00000590061 SH3TC1Q8TE82 1336 aa9.06□□□□□ -0.96
SMAD4-210ENST00000590061 CDHR2Q9BYE9 1310 aa9.06□□□□□ -0.96
SMAD4-210ENST00000590061 TAF1LQ8IZX4 1826 aa9.06□□□□□ -0.96
SMAD4-210ENST00000590061 NPHP1O15259 732 aa9.06□□□□□ -0.96
SMAD4-210ENST00000590061 IGKV5-2P06315 115 aa9.06□□□□□ -0.96
SMAD4-210ENST00000590061 PLA2G12BQ9BX93 195 aa9.06□□□□□ -0.96
SMAD4-210ENST00000590061 TRMT112Q9UI30 125 aaKnown RBP9.06□□□□□ -0.96
SMAD4-210ENST00000590061 NIP7Q9Y221 180 aaKnown RBP eCLIP9.06□□□□□ -0.96
SMAD4-210ENST00000590061 MYH14Q7Z406 1995 aaKnown RBP9.06□□□□□ -0.96
SMAD4-210ENST00000590061 USP42Q9H9J4 1324 aaKnown RBP9.05□□□□□ -0.96
SMAD4-210ENST00000590061 C4BP0C0L5 1744 aa9.05□□□□□ -0.96
SMAD4-210ENST00000590061 EP400Q96L91 3159 aa9.05□□□□□ -0.96
SMAD4-210ENST00000590061 CARMIL3Q8ND23 1372 aa9.05□□□□□ -0.96
SMAD4-210ENST00000590061 NLRP10Q86W26 655 aa9.05□□□□□ -0.96
SMAD4-210ENST00000590061 MEIS3Q99687 375 aa9.05□□□□□ -0.96
SMAD4-210ENST00000590061 LRRC4BQ9NT99 713 aa9.05□□□□□ -0.96
SMAD4-210ENST00000590061 TOR4AQ9NXH8 423 aa9.05□□□□□ -0.96
SMAD4-210ENST00000590061 ATP5J2-PTCD1G3V325 749 aa9.04□□□□□ -0.96
SMAD4-210ENST00000590061 SPTLC1O15269 473 aa9.04□□□□□ -0.96
SMAD4-210ENST00000590061 SRGAP3O43295 1099 aa9.04□□□□□ -0.96
SMAD4-210ENST00000590061 PDE8AO60658 829 aa9.04□□□□□ -0.96
SMAD4-210ENST00000590061 DGAT1O75907 488 aa9.04□□□□□ -0.96
SMAD4-210ENST00000590061 CD2BP2O95400 341 aaKnown RBP9.04□□□□□ -0.96
SMAD4-210ENST00000590061 ST5P78524 1137 aa9.04□□□□□ -0.96
SMAD4-210ENST00000590061 SLC15A2Q16348 729 aa9.04□□□□□ -0.96
SMAD4-210ENST00000590061 CCDC57Q2TAC2 916 aa9.04□□□□□ -0.96
SMAD4-210ENST00000590061 CWF19L2Q2TBE0 894 aaKnown RBP9.04□□□□□ -0.96
SMAD4-210ENST00000590061 CCDC152Q4G0S7 254 aa9.04□□□□□ -0.96
SMAD4-210ENST00000590061 CEP85Q6P2H3 762 aa9.04□□□□□ -0.96
SMAD4-210ENST00000590061 PTF1AQ7RTS3 328 aa9.04□□□□□ -0.96
SMAD4-210ENST00000590061 UBE3BQ7Z3V4 1068 aa9.04□□□□□ -0.96
SMAD4-210ENST00000590061 NBPF5PQ86XG9 351 aaPredicted RBP9.04□□□□□ -0.96
SMAD4-210ENST00000590061 SSH3Q8TE77 659 aa9.04□□□□□ -0.96
SMAD4-210ENST00000590061 DCTPP1Q9H773 170 aa9.04□□□□□ -0.96
SMAD4-210ENST00000590061 LRRFIP2Q9Y608 721 aaKnown RBP9.04□□□□□ -0.96
SMAD4-210ENST00000590061 ARFGEF2Q9Y6D5 1785 aa9.04□□□□□ -0.96
SMAD4-210ENST00000590061 NUP98P52948 1817 aa9.03□□□□□ -0.96
SMAD4-210ENST00000590061 C6orf229H3BNL8 230 aa9.03□□□□□ -0.96
SMAD4-210ENST00000590061 IRS4O14654 1257 aaPredicted RBP9.03□□□□□ -0.96
SMAD4-210ENST00000590061 NBPF7P0C2Y1 421 aaPredicted RBP9.03□□□□□ -0.96
SMAD4-210ENST00000590061 PIP4K2AP48426 406 aaPredicted RBP9.03□□□□□ -0.96
SMAD4-210ENST00000590061 FOXC1Q12948 553 aa9.03□□□□□ -0.96
SMAD4-210ENST00000590061 G3BP1Q13283 466 aaKnown RBP eCLIP9.03□□□□□ -0.96
SMAD4-210ENST00000590061 IFIT5Q13325 482 aaKnown RBP9.03□□□□□ -0.96
SMAD4-210ENST00000590061 DIXDC1Q155Q3 683 aa9.03□□□□□ -0.96
SMAD4-210ENST00000590061 RABL6Q3YEC7 729 aaPredicted RBP9.03□□□□□ -0.96
SMAD4-210ENST00000590061 TAF7LQ5H9L4 462 aa9.03□□□□□ -0.96
SMAD4-210ENST00000590061 SLC10A5Q5PT55 438 aa9.03□□□□□ -0.96
SMAD4-210ENST00000590061 USPL1Q5W0Q7 1092 aa9.03□□□□□ -0.96
SMAD4-210ENST00000590061 SMC5Q8IY18 1101 aa9.03□□□□□ -0.96
SMAD4-210ENST00000590061 NLRP3Q96P20 1036 aa9.03□□□□□ -0.96
SMAD4-210ENST00000590061 PCDHB15Q9Y5E8 787 aa9.03□□□□□ -0.96
SMAD4-210ENST00000590061 TNS1Q9HBL0 1735 aaKnown RBP9.02□□□□□ -0.96
SMAD4-210ENST00000590061 WNT7AO00755 349 aa9.02□□□□□ -0.97
SMAD4-210ENST00000590061 ZBTB24O43167 697 aaPredicted RBP9.02□□□□□ -0.97
SMAD4-210ENST00000590061 OS9Q13438 667 aaPredicted RBP9.02□□□□□ -0.97
SMAD4-210ENST00000590061 MTMR2Q13614 643 aa9.02□□□□□ -0.97
SMAD4-210ENST00000590061 HLFQ16534 295 aa9.02□□□□□ -0.97
SMAD4-210ENST00000590061 B4GALNT3Q6L9W6 998 aa9.02□□□□□ -0.97
SMAD4-210ENST00000590061 TMC4Q7Z404 712 aa9.02□□□□□ -0.97
SMAD4-210ENST00000590061 CNBD1Q8NA66 436 aa9.02□□□□□ -0.97
SMAD4-210ENST00000590061 KIF1BPQ96EK5 621 aa9.02□□□□□ -0.97
SMAD4-210ENST00000590061 GPATCH3Q96I76 525 aa9.02□□□□□ -0.97
SMAD4-210ENST00000590061 CDC5LQ99459 802 aaKnown RBP9.02□□□□□ -0.97
SMAD4-210ENST00000590061 TMX4Q9H1E5 349 aaPredicted RBP9.02□□□□□ -0.97
SMAD4-210ENST00000590061 NOP58Q9Y2X3 529 aaKnown RBP9.02□□□□□ -0.97
SMAD4-210ENST00000590061 PARP3Q9Y6F1 533 aa9.02□□□□□ -0.97
SMAD4-210ENST00000590061 NUP188Q5SRE5 1749 aa9.02□□□□□ -0.97
SMAD4-210ENST00000590061 ANKRD36CQ5JPF3 1778 aa9.01□□□□□ -0.97
SMAD4-210ENST00000590061 RTL9Q8NET4 1388 aa9.01□□□□□ -0.97
SMAD4-210ENST00000590061 AFDNP55196 1824 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms