RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 ATP2B4P23634 1241 aa13.02□□□□□ -0.33
SDF2-208ENST00000589788 PTGDRQ13258 359 aa13.02□□□□□ -0.33
SDF2-208ENST00000589788 MINPP1Q9UNW1 487 aa13.02□□□□□ -0.33
SDF2-208ENST00000589788 POTECB2RU33 542 aa13.01□□□□□ -0.33
SDF2-208ENST00000589788 LMOD1P29536 600 aaPredicted RBP13.01□□□□□ -0.33
SDF2-208ENST00000589788 HIC1Q14526 733 aa13.01□□□□□ -0.33
SDF2-208ENST00000589788 CCDC102AQ96A19 550 aa13.01□□□□□ -0.33
SDF2-208ENST00000589788 GPR101Q96P66 508 aaPredicted RBP13.01□□□□□ -0.33
SDF2-208ENST00000589788 ANKRD2Q9GZV1 360 aa13.01□□□□□ -0.33
SDF2-208ENST00000589788 USP44Q9H0E7 712 aa13.01□□□□□ -0.33
SDF2-208ENST00000589788 DBNDD1Q9H9R9 158 aa13.01□□□□□ -0.33
SDF2-208ENST00000589788 RAD17O75943 681 aa13□□□□□ -0.33
SDF2-208ENST00000589788 KCNJ4P48050 445 aa13□□□□□ -0.33
SDF2-208ENST00000589788 CXCL9Q07325 125 aa13□□□□□ -0.33
SDF2-208ENST00000589788 PDE4DQ08499 809 aa13□□□□□ -0.33
SDF2-208ENST00000589788 TNIP1Q15025 636 aa13□□□□□ -0.33
SDF2-208ENST00000589788 DOK7Q18PE1 504 aa13□□□□□ -0.33
SDF2-208ENST00000589788 CIAPIN1Q6FI81 312 aa13□□□□□ -0.33
SDF2-208ENST00000589788 SMC1BQ8NDV3 1235 aa13□□□□□ -0.33
SDF2-208ENST00000589788 BICC1Q9H694 974 aaKnown RBP13□□□□□ -0.33
SDF2-208ENST00000589788 CDHR5Q9HBB8 845 aa13□□□□□ -0.33
SDF2-208ENST00000589788 HACL1Q9UJ83 578 aa13□□□□□ -0.33
SDF2-208ENST00000589788 HDAC5Q9UQL6 1122 aa13□□□□□ -0.33
SDF2-208ENST00000589788 ECE2O60344 883 aa12.99□□□□□ -0.33
SDF2-208ENST00000589788 UBTFL1P0CB47 393 aaPredicted RBP12.99□□□□□ -0.33
SDF2-208ENST00000589788 FSTL1Q12841 308 aa12.99□□□□□ -0.33
SDF2-208ENST00000589788 ATF7IPQ6VMQ6 1270 aa12.99□□□□□ -0.33
SDF2-208ENST00000589788 LDHAL6AQ6ZMR3 332 aa12.99□□□□□ -0.33
SDF2-208ENST00000589788 KAZALD1Q96I82 304 aa12.99□□□□□ -0.33
SDF2-208ENST00000589788 TAF1DQ9H5J8 278 aaPredicted RBP12.99□□□□□ -0.33
SDF2-208ENST00000589788 CNNM1Q9NRU3 951 aa12.99□□□□□ -0.33
SDF2-208ENST00000589788 PCDHGA10Q9Y5H3 936 aa12.99□□□□□ -0.33
SDF2-208ENST00000589788 YDJCA8MPS7 323 aa12.98□□□□□ -0.33
SDF2-208ENST00000589788 TRIM27P14373 513 aa12.98□□□□□ -0.33
SDF2-208ENST00000589788 EPHX2P34913 555 aa12.98□□□□□ -0.33
SDF2-208ENST00000589788 CHRNDQ07001 517 aa12.98□□□□□ -0.33
SDF2-208ENST00000589788 RABL6Q3YEC7 729 aaPredicted RBP12.98□□□□□ -0.33
SDF2-208ENST00000589788 EAPPQ56P03 285 aaPredicted RBP12.98□□□□□ -0.33
SDF2-208ENST00000589788 ZKSCAN2Q63HK3 967 aa12.98□□□□□ -0.33
SDF2-208ENST00000589788 INTS3Q68E01 1043 aaKnown RBP12.98□□□□□ -0.33
SDF2-208ENST00000589788 CLUAP1Q96AJ1 413 aa12.98□□□□□ -0.33
SDF2-208ENST00000589788 ZNF594Q96JF6 807 aaPredicted RBP12.98□□□□□ -0.33
SDF2-208ENST00000589788 LEMD3Q9Y2U8 911 aa12.98□□□□□ -0.33
SDF2-208ENST00000589788 MED23Q9ULK4 1368 aa12.97□□□□□ -0.33
SDF2-208ENST00000589788 ZNF804BA4D1E1 1349 aa12.97□□□□□ -0.33
SDF2-208ENST00000589788 IRF6O14896 467 aa12.97□□□□□ -0.33
SDF2-208ENST00000589788 HOXB3P14651 431 aaPredicted RBP12.97□□□□□ -0.33
SDF2-208ENST00000589788 PNMA8AQ86V59 439 aaPredicted RBP12.97□□□□□ -0.33
SDF2-208ENST00000589788 ANKRD44Q8N8A2 993 aa12.97□□□□□ -0.33
SDF2-208ENST00000589788 KDM4CQ9H3R0 1056 aa12.97□□□□□ -0.33
SDF2-208ENST00000589788 WTIPA6NIX2 430 aaPredicted RBP12.96□□□□□ -0.33
SDF2-208ENST00000589788 PLIN1O60240 522 aa12.96□□□□□ -0.33
SDF2-208ENST00000589788 GNAI3P08754 354 aa12.96□□□□□ -0.33
SDF2-208ENST00000589788 HSPA6P17066 643 aa12.96□□□□□ -0.33
SDF2-208ENST00000589788 GMPSP49915 693 aaPredicted RBP12.96□□□□□ -0.33
SDF2-208ENST00000589788 SCNN1DP51172 638 aa12.96□□□□□ -0.33
SDF2-208ENST00000589788 FTSJ3Q8IY81 847 aaKnown RBP12.96□□□□□ -0.33
SDF2-208ENST00000589788 HELBQ8NG08 1087 aaPredicted RBP12.96□□□□□ -0.33
SDF2-208ENST00000589788 EPAS1Q99814 870 aa12.96□□□□□ -0.33
SDF2-208ENST00000589788 NPDC1Q9NQX5 325 aaPredicted RBP12.96□□□□□ -0.33
SDF2-208ENST00000589788 A0A1B0GUL6 1792 aa12.95□□□□□ -0.34
SDF2-208ENST00000589788 PSMD14O00487 310 aa12.95□□□□□ -0.34
SDF2-208ENST00000589788 TAF5LO75529 589 aa12.95□□□□□ -0.34
SDF2-208ENST00000589788 EPS15P42566 896 aa12.95□□□□□ -0.34
SDF2-208ENST00000589788 PODNQ7Z5L7 613 aa12.95□□□□□ -0.34
SDF2-208ENST00000589788 LDHDQ86WU2 507 aa12.95□□□□□ -0.34
SDF2-208ENST00000589788 MEIS3Q99687 375 aa12.95□□□□□ -0.34
SDF2-208ENST00000589788 GPRC5DQ9NZD1 345 aa12.95□□□□□ -0.34
SDF2-208ENST00000589788 TNNQ9UQP3 1299 aa12.95□□□□□ -0.34
SDF2-208ENST00000589788 PUS3Q9BZE2 481 aaKnown RBP12.94□□□□□ -0.34
SDF2-208ENST00000589788 COA1Q9GZY4 146 aa12.94□□□□□ -0.34
SDF2-208ENST00000589788 KCNQ5Q9NR82 932 aa12.94□□□□□ -0.34
SDF2-208ENST00000589788 LRRFIP2Q9Y608 721 aaKnown RBP12.94□□□□□ -0.34
SDF2-208ENST00000589788 SCN9AQ15858 1988 aa12.94□□□□□ -0.34
SDF2-208ENST00000589788 MROH5Q6ZUA9 1318 aa12.94□□□□□ -0.34
SDF2-208ENST00000589788 H7C1D1 291 aa12.93□□□□□ -0.34
SDF2-208ENST00000589788 RPS12P25398 132 aaKnown RBP12.93□□□□□ -0.34
SDF2-208ENST00000589788 AMHR2Q16671 573 aa12.93□□□□□ -0.34
SDF2-208ENST00000589788 USP50Q70EL3 339 aaPredicted RBP12.93□□□□□ -0.34
SDF2-208ENST00000589788 DZIP1LQ8IYY4 767 aaKnown RBP12.93□□□□□ -0.34
SDF2-208ENST00000589788 TMEM57Q8N5G2 664 aa12.93□□□□□ -0.34
SDF2-208ENST00000589788 ADARB2Q9NS39 739 aaKnown RBP12.93□□□□□ -0.34
SDF2-208ENST00000589788 CNOT7Q9UIV1 285 aaKnown RBP12.93□□□□□ -0.34
SDF2-208ENST00000589788 USP17L3A6NCW0 530 aa12.92□□□□□ -0.34
SDF2-208ENST00000589788 USP17L4A6NCW7 530 aa12.92□□□□□ -0.34
SDF2-208ENST00000589788 SNAP23O00161 211 aa12.92□□□□□ -0.34
SDF2-208ENST00000589788 VIL1P09327 827 aaKnown RBP12.92□□□□□ -0.34
SDF2-208ENST00000589788 KLRK1P26718 216 aa12.92□□□□□ -0.34
SDF2-208ENST00000589788 APLP1P51693 650 aa12.92□□□□□ -0.34
SDF2-208ENST00000589788 TSR1Q2NL82 804 aaKnown RBP12.92□□□□□ -0.34
SDF2-208ENST00000589788 METTL24Q5JXM2 366 aa12.92□□□□□ -0.34
SDF2-208ENST00000589788 USP17L1Q7RTZ2 530 aa12.92□□□□□ -0.34
SDF2-208ENST00000589788 TXNRD3Q86VQ6 643 aa12.92□□□□□ -0.34
SDF2-208ENST00000589788 SLAIN1Q8ND83 568 aa12.92□□□□□ -0.34
SDF2-208ENST00000589788 KLHDC4Q8TBB5 520 aa12.92□□□□□ -0.34
SDF2-208ENST00000589788 DPF2Q92785 391 aa12.92□□□□□ -0.34
SDF2-208ENST00000589788 FBXW7Q969H0 707 aa12.92□□□□□ -0.34
SDF2-208ENST00000589788 RIPOR2Q9Y4F9 1068 aa12.92□□□□□ -0.34
SDF2-208ENST00000589788 PSME4Q14997 1843 aa12.92□□□□□ -0.34
SDF2-208ENST00000589788 MAP3K7O43318 606 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms