RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 DCPSQ96C86 337 aaKnown RBP20.35■□□□□ 0.85
DNMT1-221ENST00000589538 EGFRP00533 1210 aa20.34■□□□□ 0.85
DNMT1-221ENST00000589538 POLA2Q14181 598 aa20.34■□□□□ 0.85
DNMT1-221ENST00000589538 TBC1D22AQ8WUA7 517 aa20.34■□□□□ 0.85
DNMT1-221ENST00000589538 MXD3Q9BW11 206 aa20.34■□□□□ 0.85
DNMT1-221ENST00000589538 TRPM7Q96QT4 1865 aa20.33■□□□□ 0.85
DNMT1-221ENST00000589538 TMEM88BA6NKF7 163 aa20.33■□□□□ 0.85
DNMT1-221ENST00000589538 KIAA0825Q8IV33 1275 aa20.33■□□□□ 0.85
DNMT1-221ENST00000589538 C1orf115Q9H7X2 142 aa20.33■□□□□ 0.85
DNMT1-221ENST00000589538 GNL3LQ9NVN8 582 aaKnown RBP20.33■□□□□ 0.85
DNMT1-221ENST00000589538 COG6Q9Y2V7 657 aa20.33■□□□□ 0.85
DNMT1-221ENST00000589538 BCAMP50895 628 aa20.32■□□□□ 0.84
DNMT1-221ENST00000589538 MFSD14BQ5SR56 506 aa20.32■□□□□ 0.84
DNMT1-221ENST00000589538 PITPNM2Q9BZ72 1349 aa20.31■□□□□ 0.84
DNMT1-221ENST00000589538 ARAP2Q8WZ64 1704 aa20.31■□□□□ 0.84
DNMT1-221ENST00000589538 SCARF1Q14162 830 aa20.31■□□□□ 0.84
DNMT1-221ENST00000589538 CERS5Q8N5B7 392 aa20.31■□□□□ 0.84
DNMT1-221ENST00000589538 MYH13Q9UKX3 1938 aa20.31■□□□□ 0.84
DNMT1-221ENST00000589538 ZBTB22O15209 634 aa20.3■□□□□ 0.84
DNMT1-221ENST00000589538 TFCP2Q12800 502 aa20.3■□□□□ 0.84
DNMT1-221ENST00000589538 CEP85Q6P2H3 762 aa20.3■□□□□ 0.84
DNMT1-221ENST00000589538 KRT26Q7Z3Y9 468 aa20.3■□□□□ 0.84
DNMT1-221ENST00000589538 SULF1Q8IWU6 871 aa20.3■□□□□ 0.84
DNMT1-221ENST00000589538 GLIS2Q9BZE0 524 aaPredicted RBP20.3■□□□□ 0.84
DNMT1-221ENST00000589538 ZBTB40Q9NUA8 1239 aa20.3■□□□□ 0.84
DNMT1-221ENST00000589538 GGA3Q9NZ52 723 aa20.3■□□□□ 0.84
DNMT1-221ENST00000589538 SEMA3EO15041 775 aa20.29■□□□□ 0.84
DNMT1-221ENST00000589538 CHAF1AQ13111 956 aaPredicted RBP20.29■□□□□ 0.84
DNMT1-221ENST00000589538 OS9Q13438 667 aaPredicted RBP20.29■□□□□ 0.84
DNMT1-221ENST00000589538 DLGAP5Q15398 846 aa20.29■□□□□ 0.84
DNMT1-221ENST00000589538 RPAP2Q8IXW5 612 aaPredicted RBP20.29■□□□□ 0.84
DNMT1-221ENST00000589538 DNAJC5GQ8N7S2 189 aa20.29■□□□□ 0.84
DNMT1-221ENST00000589538 MTMR14Q8NCE2 650 aa20.29■□□□□ 0.84
DNMT1-221ENST00000589538 NOP58Q9Y2X3 529 aaKnown RBP20.29■□□□□ 0.84
DNMT1-221ENST00000589538 SUGT1Q9Y2Z0 365 aa20.29■□□□□ 0.84
DNMT1-221ENST00000589538 POLR2AP24928 1970 aaKnown RBP20.28■□□□□ 0.84
DNMT1-221ENST00000589538 A0A1B0GUL7 405 aa20.28■□□□□ 0.84
DNMT1-221ENST00000589538 WNT10BO00744 389 aa20.28■□□□□ 0.84
DNMT1-221ENST00000589538 HMMRO75330 724 aa20.28■□□□□ 0.84
DNMT1-221ENST00000589538 SURF6O75683 361 aaKnown RBP20.28■□□□□ 0.84
DNMT1-221ENST00000589538 HTRA3P83110 453 aa20.28■□□□□ 0.84
DNMT1-221ENST00000589538 USP48Q86UV5 1035 aa20.28■□□□□ 0.84
DNMT1-221ENST00000589538 WDR66Q8TBY9 1149 aa20.28■□□□□ 0.84
DNMT1-221ENST00000589538 IQSEC3Q9UPP2 1182 aaPredicted RBP20.28■□□□□ 0.84
DNMT1-221ENST00000589538 JAG2Q9Y219 1238 aa20.28■□□□□ 0.84
DNMT1-221ENST00000589538 CEP350Q5VT06 3117 aa20.28■□□□□ 0.84
DNMT1-221ENST00000589538 TRAF5O00463 557 aa20.27■□□□□ 0.84
DNMT1-221ENST00000589538 MYO1BO43795 1136 aa20.27■□□□□ 0.84
DNMT1-221ENST00000589538 TIMM10P62072 90 aa20.27■□□□□ 0.84
DNMT1-221ENST00000589538 ANGEL2Q5VTE6 544 aaKnown RBP20.27■□□□□ 0.84
DNMT1-221ENST00000589538 KLRG1Q96E93 195 aa20.27■□□□□ 0.84
DNMT1-221ENST00000589538 GPR108Q9NPR9 543 aa20.27■□□□□ 0.84
DNMT1-221ENST00000589538 DENND2AQ9ULE3 1009 aa20.27■□□□□ 0.84
DNMT1-221ENST00000589538 MAST3O60307 1309 aa20.27■□□□□ 0.83
DNMT1-221ENST00000589538 F8W031 263 aaPredicted RBP20.26■□□□□ 0.83
DNMT1-221ENST00000589538 NBPF9Q3BBW0 867 aa20.26■□□□□ 0.83
DNMT1-221ENST00000589538 HSP90AB4PQ58FF6 505 aa20.26■□□□□ 0.83
DNMT1-221ENST00000589538 ERC1Q8IUD2 1116 aa20.26■□□□□ 0.83
DNMT1-221ENST00000589538 ZBED3Q96IU2 234 aaPredicted RBP20.26■□□□□ 0.83
DNMT1-221ENST00000589538 SERPINA10Q9UK55 444 aa20.26■□□□□ 0.83
DNMT1-221ENST00000589538 TTF2Q9UNY4 1162 aaKnown RBP20.26■□□□□ 0.83
DNMT1-221ENST00000589538 ECM29Q5VYK3 1845 aa20.25■□□□□ 0.83
DNMT1-221ENST00000589538 CELF2O95319 508 aaKnown RBP20.25■□□□□ 0.83
DNMT1-221ENST00000589538 HDLBPQ00341 1268 aaKnown RBP20.25■□□□□ 0.83
DNMT1-221ENST00000589538 CFAP100Q494V2 611 aa20.25■□□□□ 0.83
DNMT1-221ENST00000589538 GORABQ5T7V8 394 aa20.25■□□□□ 0.83
DNMT1-221ENST00000589538 C20orf194Q5TEA3 1177 aa20.25■□□□□ 0.83
DNMT1-221ENST00000589538 CCDC102BQ68D86 513 aa20.25■□□□□ 0.83
DNMT1-221ENST00000589538 APOBEC3FQ8IUX4 373 aaKnown RBP20.25■□□□□ 0.83
DNMT1-221ENST00000589538 XAGE2Q96GT9 111 aa20.25■□□□□ 0.83
DNMT1-221ENST00000589538 NEUROD6Q96NK8 337 aa20.25■□□□□ 0.83
DNMT1-221ENST00000589538 PDS5AQ29RF7 1337 aaKnown RBP20.25■□□□□ 0.83
DNMT1-221ENST00000589538 PHKA1P46020 1223 aa20.24■□□□□ 0.83
DNMT1-221ENST00000589538 CST9Q5W186 159 aa20.24■□□□□ 0.83
DNMT1-221ENST00000589538 ZGPATQ8N5A5 531 aaKnown RBP20.24■□□□□ 0.83
DNMT1-221ENST00000589538 MRIQ9BWK5 157 aa20.24■□□□□ 0.83
DNMT1-221ENST00000589538 ABT1Q9ULW3 272 aaKnown RBP20.24■□□□□ 0.83
DNMT1-221ENST00000589538 ASTN2O75129 1339 aaPredicted RBP20.24■□□□□ 0.83
DNMT1-221ENST00000589538 CNTNAP1P78357 1384 aa20.23■□□□□ 0.83
DNMT1-221ENST00000589538 SPDYE2BA6NHP3 402 aa20.23■□□□□ 0.83
DNMT1-221ENST00000589538 SPDYE6P0CI01 402 aa20.23■□□□□ 0.83
DNMT1-221ENST00000589538 ADORA1P30542 326 aa20.23■□□□□ 0.83
DNMT1-221ENST00000589538 RBM5P52756 815 aaKnown RBP eCLIP20.23■□□□□ 0.83
DNMT1-221ENST00000589538 RRP1P56182 461 aaKnown RBP20.23■□□□□ 0.83
DNMT1-221ENST00000589538 FMR1Q06787 632 aaKnown RBP eCLIP20.23■□□□□ 0.832e-7■■□□□ 13.5
DNMT1-221ENST00000589538 ZNF408Q9H9D4 720 aa20.23■□□□□ 0.83
DNMT1-221ENST00000589538 RASSF10A6NK89 507 aa20.22■□□□□ 0.83
DNMT1-221ENST00000589538 ADM5C9JUS6 153 aa20.22■□□□□ 0.83
DNMT1-221ENST00000589538 TEKT1Q969V4 418 aa20.22■□□□□ 0.83
DNMT1-221ENST00000589538 TLL2Q9Y6L7 1015 aa20.22■□□□□ 0.83
DNMT1-221ENST00000589538 SALL1Q9NSC2 1324 aa20.22■□□□□ 0.83
DNMT1-221ENST00000589538 UQCRFS1P1P0C7P4 283 aa20.21■□□□□ 0.83
DNMT1-221ENST00000589538 CRKP46108 304 aa20.21■□□□□ 0.83
DNMT1-221ENST00000589538 DEFB115Q30KQ5 88 aa20.21■□□□□ 0.83
DNMT1-221ENST00000589538 TNNI3KQ59H18 835 aa20.21■□□□□ 0.83
DNMT1-221ENST00000589538 HHIPL1Q96JK4 782 aa20.21■□□□□ 0.83
DNMT1-221ENST00000589538 FPGT-TNNI3KV9GXZ4 949 aa20.21■□□□□ 0.83
DNMT1-221ENST00000589538 COL1A1P02452 1464 aaPredicted RBP20.21■□□□□ 0.83
DNMT1-221ENST00000589538 C2orf69Q8N8R5 385 aa20.2■□□□□ 0.82
DNMT1-221ENST00000589538 JMYQ8N9B5 988 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms