RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 LRRC24Q50LG9 513 aa17.55■□□□□ 0.4
CCDC43-203ENST00000588210 SSH3Q8TE77 659 aa17.55■□□□□ 0.4
CCDC43-203ENST00000588210 TMX3Q96JJ7 454 aa17.55■□□□□ 0.4
CCDC43-203ENST00000588210 ZC3H12CQ9C0D7 883 aaKnown RBP17.55■□□□□ 0.4
CCDC43-203ENST00000588210 ZNF804BA4D1E1 1349 aa17.54■□□□□ 0.4
CCDC43-203ENST00000588210 TAF5LO75529 589 aa17.54■□□□□ 0.4
CCDC43-203ENST00000588210 CIAO1O76071 339 aa17.54■□□□□ 0.4
CCDC43-203ENST00000588210 ZSCAN23Q3MJ62 389 aa17.54■□□□□ 0.4
CCDC43-203ENST00000588210 NIM1KQ8IY84 436 aa17.54■□□□□ 0.4
CCDC43-203ENST00000588210 TIAM2Q8IVF5 1701 aa17.54■□□□□ 0.4
CCDC43-203ENST00000588210 FZD9O00144 591 aa17.53■□□□□ 0.4
CCDC43-203ENST00000588210 RIMBP2O15034 1052 aa17.53■□□□□ 0.4
CCDC43-203ENST00000588210 KCNJ4P48050 445 aa17.53■□□□□ 0.4
CCDC43-203ENST00000588210 CAVIN1Q6NZI2 390 aaKnown RBP17.53■□□□□ 0.4
CCDC43-203ENST00000588210 HELBQ8NG08 1087 aaPredicted RBP17.53■□□□□ 0.4
CCDC43-203ENST00000588210 MED23Q9ULK4 1368 aa17.53■□□□□ 0.4
CCDC43-203ENST00000588210 TRIM6-TRIM34B2RNG4 842 aa17.52■□□□□ 0.4
CCDC43-203ENST00000588210 RAB11FIP3O75154 756 aa17.52■□□□□ 0.4
CCDC43-203ENST00000588210 POLA2Q14181 598 aa17.52■□□□□ 0.4
CCDC43-203ENST00000588210 METTL24Q5JXM2 366 aa17.52■□□□□ 0.4
CCDC43-203ENST00000588210 INTS4Q96HW7 963 aaKnown RBP17.52■□□□□ 0.4
CCDC43-203ENST00000588210 SIL1Q9H173 461 aa17.52■□□□□ 0.4
CCDC43-203ENST00000588210 PALD1Q9ULE6 856 aa17.52■□□□□ 0.4
CCDC43-203ENST00000588210 PA2G4Q9UQ80 394 aaKnown RBP17.52■□□□□ 0.4
CCDC43-203ENST00000588210 IL15P40933 162 aaPredicted RBP17.52■□□□□ 0.39
CCDC43-203ENST00000588210 DPY19L2Q6NUT2 758 aa17.52■□□□□ 0.39
CCDC43-203ENST00000588210 ATG9AQ7Z3C6 839 aa17.52■□□□□ 0.39
CCDC43-203ENST00000588210 RILPL2Q969X0 211 aa17.52■□□□□ 0.39
CCDC43-203ENST00000588210 GPR101Q96P66 508 aaPredicted RBP17.52■□□□□ 0.39
CCDC43-203ENST00000588210 ANO2Q9NQ90 1003 aa17.52■□□□□ 0.39
CCDC43-203ENST00000588210 A0A1B0GUL6 1792 aa17.52■□□□□ 0.39
CCDC43-203ENST00000588210 COL4A5P29400 1685 aa17.52■□□□□ 0.39
CCDC43-203ENST00000588210 WTIPA6NIX2 430 aaPredicted RBP17.51■□□□□ 0.39
CCDC43-203ENST00000588210 PDE8BO95263 885 aa17.51■□□□□ 0.39
CCDC43-203ENST00000588210 GPT2Q8TD30 523 aa17.51■□□□□ 0.39
CCDC43-203ENST00000588210 ANP32BQ92688 251 aaKnown RBP17.51■□□□□ 0.39
CCDC43-203ENST00000588210 ZNRF3Q9ULT6 936 aa17.51■□□□□ 0.39
CCDC43-203ENST00000588210 PRPF40AO75400 957 aaKnown RBP17.51■□□□□ 0.39
CCDC43-203ENST00000588210 UBE4AQ14139 1066 aa17.51■□□□□ 0.39
CCDC43-203ENST00000588210 GLTPD2A6NH11 291 aa17.5■□□□□ 0.39
CCDC43-203ENST00000588210 BRD1O95696 1058 aa17.5■□□□□ 0.39
CCDC43-203ENST00000588210 EIF6P56537 245 aaKnown RBP17.5■□□□□ 0.39
CCDC43-203ENST00000588210 C15orf52Q6ZUT6 534 aaKnown RBP17.5■□□□□ 0.39
CCDC43-203ENST00000588210 VGLL2Q8N8G2 317 aa17.5■□□□□ 0.39
CCDC43-203ENST00000588210 G3V3G9 751 aa17.49■□□□□ 0.39
CCDC43-203ENST00000588210 NCLP19338 710 aaKnown RBP17.49■□□□□ 0.39
CCDC43-203ENST00000588210 DCAF8Q5TAQ9 597 aa17.49■□□□□ 0.39
CCDC43-203ENST00000588210 SNAP23O00161 211 aa17.49■□□□□ 0.39
CCDC43-203ENST00000588210 DBNDD1Q9H9R9 158 aa17.49■□□□□ 0.39
CCDC43-203ENST00000588210 CEP126Q9P2H0 1117 aa17.49■□□□□ 0.39
CCDC43-203ENST00000588210 G3BP1Q13283 466 aaKnown RBP eCLIP17.48■□□□□ 0.39
CCDC43-203ENST00000588210 DOK7Q18PE1 504 aa17.48■□□□□ 0.39
CCDC43-203ENST00000588210 IRS2Q9Y4H2 1338 aa17.48■□□□□ 0.39
CCDC43-203ENST00000588210 ECE2O60344 883 aa17.48■□□□□ 0.39
CCDC43-203ENST00000588210 MBD3O95983 291 aa17.48■□□□□ 0.39
CCDC43-203ENST00000588210 HSPA4P34932 840 aa17.48■□□□□ 0.39
CCDC43-203ENST00000588210 PUM3Q15397 648 aaKnown RBP17.48■□□□□ 0.39
CCDC43-203ENST00000588210 PODNQ7Z5L7 613 aa17.48■□□□□ 0.39
CCDC43-203ENST00000588210 TXNRD3Q86VQ6 643 aa17.48■□□□□ 0.39
CCDC43-203ENST00000588210 ZNF784Q8NCA9 323 aaPredicted RBP17.48■□□□□ 0.39
CCDC43-203ENST00000588210 COA1Q9GZY4 146 aa17.48■□□□□ 0.39
CCDC43-203ENST00000588210 IL1RAPL2Q9NP60 686 aa17.48■□□□□ 0.39
CCDC43-203ENST00000588210 ZNF541Q9H0D2 1346 aa17.47■□□□□ 0.39
CCDC43-203ENST00000588210 YDJCA8MPS7 323 aa17.47■□□□□ 0.39
CCDC43-203ENST00000588210 PI4K2BQ8TCG2 481 aa17.47■□□□□ 0.39
CCDC43-203ENST00000588210 RHPN1Q8TCX5 695 aa17.47■□□□□ 0.39
CCDC43-203ENST00000588210 NAP1L5Q96NT1 182 aaPredicted RBP17.47■□□□□ 0.39
CCDC43-203ENST00000588210 TCHHQ07283 1943 aa17.47■□□□□ 0.39
CCDC43-203ENST00000588210 SURF6O75683 361 aaKnown RBP17.46■□□□□ 0.39
CCDC43-203ENST00000588210 KLRK1P26718 216 aa17.46■□□□□ 0.39
CCDC43-203ENST00000588210 GPC2Q8N158 579 aa17.46■□□□□ 0.39
CCDC43-203ENST00000588210 KIF1BPQ96EK5 621 aa17.46■□□□□ 0.39
CCDC43-203ENST00000588210 RAD50Q92878 1312 aa17.46■□□□□ 0.39
CCDC43-203ENST00000588210 DDNO94850 711 aaPredicted RBP17.46■□□□□ 0.39
CCDC43-203ENST00000588210 FGFR2P21802 821 aa17.46■□□□□ 0.39
CCDC43-203ENST00000588210 CXCL9Q07325 125 aa17.46■□□□□ 0.39
CCDC43-203ENST00000588210 ZNF526Q8TF50 670 aaPredicted RBP17.46■□□□□ 0.39
CCDC43-203ENST00000588210 GPBP1L1Q9HC44 474 aaPredicted RBP17.46■□□□□ 0.39
CCDC43-203ENST00000588210 IFIT1P09914 478 aaKnown RBP17.45■□□□□ 0.38
CCDC43-203ENST00000588210 TNIP1Q15025 636 aa17.45■□□□□ 0.38
CCDC43-203ENST00000588210 CIAPIN1Q6FI81 312 aa17.45■□□□□ 0.38
CCDC43-203ENST00000588210 ZNF804AQ7Z570 1209 aa17.45■□□□□ 0.38
CCDC43-203ENST00000588210 LPIN2Q92539 896 aa17.45■□□□□ 0.38
CCDC43-203ENST00000588210 RBSNQ9H1K0 784 aa17.45■□□□□ 0.38
CCDC43-203ENST00000588210 IL25Q9H293 177 aa17.45■□□□□ 0.38
CCDC43-203ENST00000588210 RBM27Q9P2N5 1060 aaKnown RBP17.45■□□□□ 0.38
CCDC43-203ENST00000588210 HS1BP3Q53T59 392 aa17.44■□□□□ 0.38
CCDC43-203ENST00000588210 LRSAM1Q6UWE0 723 aa17.44■□□□□ 0.38
CCDC43-203ENST00000588210 ZSCAN30Q86W11 494 aa17.44■□□□□ 0.38
CCDC43-203ENST00000588210 TMEM63CQ9P1W3 806 aa17.44■□□□□ 0.38
CCDC43-203ENST00000588210 RAD17O75943 681 aa17.44■□□□□ 0.38
CCDC43-203ENST00000588210 SLC5A1P13866 664 aa17.44■□□□□ 0.38
CCDC43-203ENST00000588210 TFCP2Q12800 502 aa17.44■□□□□ 0.38
CCDC43-203ENST00000588210 OS9Q13438 667 aaPredicted RBP17.44■□□□□ 0.38
CCDC43-203ENST00000588210 HSP90AB4PQ58FF6 505 aa17.44■□□□□ 0.38
CCDC43-203ENST00000588210 PDLIM2Q96JY6 352 aa17.44■□□□□ 0.38
CCDC43-203ENST00000588210 CD209Q9NNX6 404 aa17.44■□□□□ 0.38
CCDC43-203ENST00000588210 AKAP2Q9Y2D5 859 aa17.44■□□□□ 0.38
CCDC43-203ENST00000588210 SGSM2O43147 1006 aa17.43■□□□□ 0.38
CCDC43-203ENST00000588210 SASH1O94885 1247 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms