RNA–Protein interactions for RNA: ENST00000588090.5

CIRBP-216, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-216ENST00000588090 CNOT7Q9UIV1 285 aaKnown RBP28.81■■■□□ 2.2
CIRBP-216ENST00000588090 IQSEC3Q9UPP2 1182 aaPredicted RBP28.81■■■□□ 2.2
CIRBP-216ENST00000588090 APBB1O00213 710 aa28.8■■■□□ 2.2
CIRBP-216ENST00000588090 SEMA3EO15041 775 aa28.8■■■□□ 2.2
CIRBP-216ENST00000588090 ZBTB22O15209 634 aa28.8■■■□□ 2.2
CIRBP-216ENST00000588090 EPS15P42566 896 aa28.8■■■□□ 2.2
CIRBP-216ENST00000588090 PHKA1P46020 1223 aa28.8■■■□□ 2.2
CIRBP-216ENST00000588090 PNMA8AQ86V59 439 aaPredicted RBP28.8■■■□□ 2.2
CIRBP-216ENST00000588090 MICALL2Q8IY33 904 aa28.8■■■□□ 2.2
CIRBP-216ENST00000588090 GMLQ99445 158 aa28.8■■■□□ 2.2
CIRBP-216ENST00000588090 H7C1D1 291 aa28.79■■■□□ 2.2
CIRBP-216ENST00000588090 CLASRPQ8N2M8 674 aaKnown RBP28.79■■■□□ 2.2
CIRBP-216ENST00000588090 ADARB2Q9NS39 739 aaKnown RBP28.79■■■□□ 2.2
CIRBP-216ENST00000588090 HDAC1Q13547 482 aaPredicted RBP28.78■■■□□ 2.2
CIRBP-216ENST00000588090 MMP14P50281 582 aa28.78■■■□□ 2.2
CIRBP-216ENST00000588090 TBC1D22AQ8WUA7 517 aa28.78■■■□□ 2.2
CIRBP-216ENST00000588090 EAF2Q96CJ1 260 aaPredicted RBP28.78■■■□□ 2.2
CIRBP-216ENST00000588090 MXD3Q9BW11 206 aa28.78■■■□□ 2.2
CIRBP-216ENST00000588090 LRRCC1Q9C099 1032 aa28.78■■■□□ 2.2
CIRBP-216ENST00000588090 IL1RAPL2Q9NP60 686 aa28.78■■■□□ 2.2
CIRBP-216ENST00000588090 JAG2Q9Y219 1238 aa28.78■■■□□ 2.2
CIRBP-216ENST00000588090 USP17L8P0C7I0 530 aa28.77■■■□□ 2.2
CIRBP-216ENST00000588090 CHAF1AQ13111 956 aaPredicted RBP28.77■■■□□ 2.2
CIRBP-216ENST00000588090 MFSD14BQ5SR56 506 aa28.77■■■□□ 2.2
CIRBP-216ENST00000588090 USP50Q70EL3 339 aaPredicted RBP28.77■■■□□ 2.2
CIRBP-216ENST00000588090 AACSQ86V21 672 aa28.77■■■□□ 2.2
CIRBP-216ENST00000588090 DBNDD2Q9BQY9 259 aa28.77■■■□□ 2.2
CIRBP-216ENST00000588090 DENND2AQ9ULE3 1009 aa28.77■■■□□ 2.2
CIRBP-216ENST00000588090 TOMM70O94826 608 aa28.76■■■□□ 2.19
CIRBP-216ENST00000588090 OGFOD1Q8N543 542 aa28.76■■■□□ 2.19
CIRBP-216ENST00000588090 ZNF280AP59817 542 aaPredicted RBP28.75■■■□□ 2.19
CIRBP-216ENST00000588090 CCDC158Q5M9N0 1113 aa28.75■■■□□ 2.19
CIRBP-216ENST00000588090 CERS5Q8N5B7 392 aa28.75■■■□□ 2.19
CIRBP-216ENST00000588090 DBNLQ9UJU6 430 aaKnown RBP28.75■■■□□ 2.19
CIRBP-216ENST00000588090 ADAMTSL1Q8N6G6 1762 aa28.75■■■□□ 2.19
CIRBP-216ENST00000588090 COL1A1P02452 1464 aaPredicted RBP28.74■■■□□ 2.19
CIRBP-216ENST00000588090 EAPPQ56P03 285 aaPredicted RBP28.74■■■□□ 2.19
CIRBP-216ENST00000588090 WDR66Q8TBY9 1149 aa28.74■■■□□ 2.19
CIRBP-216ENST00000588090 CCDC8Q9H0W5 538 aaPredicted RBP28.74■■■□□ 2.19
CIRBP-216ENST00000588090 HDAC9Q9UKV0 1011 aa28.74■■■□□ 2.19
CIRBP-216ENST00000588090 PDS5AQ29RF7 1337 aaKnown RBP28.74■■■□□ 2.19
CIRBP-216ENST00000588090 SHTN1A0MZ66 631 aa28.73■■■□□ 2.19
CIRBP-216ENST00000588090 UQCRFS1P1P0C7P4 283 aa28.73■■■□□ 2.19
CIRBP-216ENST00000588090 ARID4AP29374 1257 aaPredicted RBP28.73■■■□□ 2.19
CIRBP-216ENST00000588090 KIAA0825Q8IV33 1275 aa28.73■■■□□ 2.19
CIRBP-216ENST00000588090 RASGRF1Q13972 1273 aa28.72■■■□□ 2.19
CIRBP-216ENST00000588090 RBM46Q8TBY0 533 aaKnown RBP28.72■■■□□ 2.19
CIRBP-216ENST00000588090 RWDD1Q9H446 243 aaPredicted RBP28.72■■■□□ 2.19
CIRBP-216ENST00000588090 TLR7Q9NYK1 1049 aaKnown RBP28.72■■■□□ 2.19
CIRBP-216ENST00000588090 TTC39AQ5SRH9 613 aa28.72■■■□□ 2.19
CIRBP-216ENST00000588090 LDHDQ86WU2 507 aa28.72■■■□□ 2.19
CIRBP-216ENST00000588090 GCC1Q96CN9 775 aa28.72■■■□□ 2.19
CIRBP-216ENST00000588090 IFIT2P09913 472 aaKnown RBP28.71■■■□□ 2.19
CIRBP-216ENST00000588090 SAMD7Q7Z3H4 446 aa28.71■■■□□ 2.19
CIRBP-216ENST00000588090 ZNF512BQ96KM6 892 aaPredicted RBP28.71■■■□□ 2.19
CIRBP-216ENST00000588090 SUGT1Q9Y2Z0 365 aa28.71■■■□□ 2.19
CIRBP-216ENST00000588090 TRPM4Q8TD43 1214 aa28.7■■■□□ 2.18
CIRBP-216ENST00000588090 MYOZ2Q9NPC6 264 aa28.7■■■□□ 2.18
CIRBP-216ENST00000588090 SALL1Q9NSC2 1324 aa28.7■■■□□ 2.18
CIRBP-216ENST00000588090 KIF4BQ2VIQ3 1234 aa28.69■■■□□ 2.18
CIRBP-216ENST00000588090 TBC1D10BQ4KMP7 808 aaPredicted RBP28.69■■■□□ 2.18
CIRBP-216ENST00000588090 ZGPATQ8N5A5 531 aaKnown RBP28.69■■■□□ 2.18
CIRBP-216ENST00000588090 SMC1BQ8NDV3 1235 aa28.69■■■□□ 2.18
CIRBP-216ENST00000588090 AKAP11Q9UKA4 1901 aa28.69■■■□□ 2.18
CIRBP-216ENST00000588090 F8W031 263 aaPredicted RBP28.68■■■□□ 2.18
CIRBP-216ENST00000588090 POTEIP0CG38 1075 aa28.68■■■□□ 2.18
CIRBP-216ENST00000588090 POTEJP0CG39 1038 aa28.68■■■□□ 2.18
CIRBP-216ENST00000588090 SPATA5Q8NB90 893 aa28.68■■■□□ 2.18
CIRBP-216ENST00000588090 CLEC11AQ9Y240 323 aa28.68■■■□□ 2.18
CIRBP-216ENST00000588090 RBM26Q5T8P6 1007 aaKnown RBP28.67■■■□□ 2.18
CIRBP-216ENST00000588090 ZC3H15Q8WU90 426 aaKnown RBP28.67■■■□□ 2.18
CIRBP-216ENST00000588090 BCL11AQ9H165 835 aa28.67■■■□□ 2.18
CIRBP-216ENST00000588090 HMG20BQ9P0W2 317 aa28.67■■■□□ 2.18
CIRBP-216ENST00000588090 TTF2Q9UNY4 1162 aaKnown RBP28.67■■■□□ 2.18
CIRBP-216ENST00000588090 SMARCA5O60264 1052 aaPredicted RBP28.66■■■□□ 2.18
CIRBP-216ENST00000588090 MCAMP43121 646 aa28.66■■■□□ 2.18
CIRBP-216ENST00000588090 CHADLQ6NUI6 762 aa28.66■■■□□ 2.18
CIRBP-216ENST00000588090 MAST3O60307 1309 aa28.66■■■□□ 2.18
CIRBP-216ENST00000588090 EGFRP00533 1210 aa28.66■■■□□ 2.18
CIRBP-216ENST00000588090 HIRAP54198 1017 aaPredicted RBP28.66■■■□□ 2.18
CIRBP-216ENST00000588090 FSTL1Q12841 308 aa28.66■■■□□ 2.18
CIRBP-216ENST00000588090 ZBTB47Q9UFB7 747 aaPredicted RBP28.66■■■□□ 2.18
CIRBP-216ENST00000588090 SCARF1Q14162 830 aa28.64■■■□□ 2.17
CIRBP-216ENST00000588090 SERPINA10Q9UK55 444 aa28.64■■■□□ 2.17
CIRBP-216ENST00000588090 ECM29Q5VYK3 1845 aa28.63■■■□□ 2.17
CIRBP-216ENST00000588090 LDHBP07195 334 aaKnown RBP28.63■■■□□ 2.17
CIRBP-216ENST00000588090 PI16Q6UXB8 463 aa28.63■■■□□ 2.17
CIRBP-216ENST00000588090 SMC5Q8IY18 1101 aa28.63■■■□□ 2.17
CIRBP-216ENST00000588090 MTMR14Q8NCE2 650 aa28.63■■■□□ 2.17
CIRBP-216ENST00000588090 PGAP2Q9UHJ9 254 aa28.63■■■□□ 2.17
CIRBP-216ENST00000588090 IGHDP01880 384 aa28.62■■■□□ 2.17
CIRBP-216ENST00000588090 HDLBPQ00341 1268 aaKnown RBP28.62■■■□□ 2.17
CIRBP-216ENST00000588090 DLGAP5Q15398 846 aa28.62■■■□□ 2.17
CIRBP-216ENST00000588090 GRIK5Q16478 980 aa28.62■■■□□ 2.17
CIRBP-216ENST00000588090 SPTY2D1Q68D10 685 aaPredicted RBP28.62■■■□□ 2.17
CIRBP-216ENST00000588090 ABCF2Q9UG63 623 aa28.62■■■□□ 2.17
CIRBP-216ENST00000588090 NEFLP07196 543 aa28.61■■■□□ 2.17
CIRBP-216ENST00000588090 PRDX5P30044 214 aa28.61■■■□□ 2.17
CIRBP-216ENST00000588090 WNT10BO00744 389 aa28.6■■■□□ 2.17
CIRBP-216ENST00000588090 CFAP100Q494V2 611 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms