RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 KCNQ5Q9NR82 932 aa17.07■□□□□ 0.32
PRKCSH-202ENST00000585540 MYH13Q9UKX3 1938 aa17.06■□□□□ 0.32
PRKCSH-202ENST00000585540 MAST3O60307 1309 aa17.06■□□□□ 0.32
PRKCSH-202ENST00000585540 PDS5AQ29RF7 1337 aaKnown RBP17.06■□□□□ 0.32
PRKCSH-202ENST00000585540 SNAP23O00161 211 aa17.06■□□□□ 0.32
PRKCSH-202ENST00000585540 FRAT2O75474 233 aaPredicted RBP17.06■□□□□ 0.32
PRKCSH-202ENST00000585540 GYG1P46976 350 aa17.06■□□□□ 0.32
PRKCSH-202ENST00000585540 FBXW7Q969H0 707 aa17.06■□□□□ 0.32
PRKCSH-202ENST00000585540 PASKQ96RG2 1323 aa17.05■□□□□ 0.32
PRKCSH-202ENST00000585540 IGSF3O75054 1194 aa17.05■□□□□ 0.32
PRKCSH-202ENST00000585540 OS9Q13438 667 aaPredicted RBP17.05■□□□□ 0.32
PRKCSH-202ENST00000585540 CNTROBQ8N137 903 aa17.05■□□□□ 0.32
PRKCSH-202ENST00000585540 MTMR14Q8NCE2 650 aa17.05■□□□□ 0.32
PRKCSH-202ENST00000585540 C1orf115Q9H7X2 142 aa17.05■□□□□ 0.32
PRKCSH-202ENST00000585540 MYOZ2Q9NPC6 264 aa17.05■□□□□ 0.32
PRKCSH-202ENST00000585540 A0A1B0GUL7 405 aa17.04■□□□□ 0.32
PRKCSH-202ENST00000585540 SURF6O75683 361 aaKnown RBP17.04■□□□□ 0.32
PRKCSH-202ENST00000585540 HDLBPQ00341 1268 aaKnown RBP17.04■□□□□ 0.32
PRKCSH-202ENST00000585540 CDC37L1Q7L3B6 337 aa17.04■□□□□ 0.32
PRKCSH-202ENST00000585540 ZGPATQ8N5A5 531 aaKnown RBP17.04■□□□□ 0.32
PRKCSH-202ENST00000585540 WDR66Q8TBY9 1149 aa17.04■□□□□ 0.32
PRKCSH-202ENST00000585540 TRPM4Q8TD43 1214 aa17.04■□□□□ 0.32
PRKCSH-202ENST00000585540 DENND2AQ9ULE3 1009 aa17.04■□□□□ 0.32
PRKCSH-202ENST00000585540 POTEIP0CG38 1075 aa17.03■□□□□ 0.32
PRKCSH-202ENST00000585540 POTEJP0CG39 1038 aa17.03■□□□□ 0.32
PRKCSH-202ENST00000585540 MFSD14BQ5SR56 506 aa17.03■□□□□ 0.32
PRKCSH-202ENST00000585540 COL1A1P02452 1464 aaPredicted RBP17.03■□□□□ 0.32
PRKCSH-202ENST00000585540 SALL1Q9NSC2 1324 aa17.02■□□□□ 0.32
PRKCSH-202ENST00000585540 ITGBL1O95965 494 aaPredicted RBP17.02■□□□□ 0.32
PRKCSH-202ENST00000585540 BCAMP50895 628 aa17.02■□□□□ 0.32
PRKCSH-202ENST00000585540 TFCP2Q12800 502 aa17.02■□□□□ 0.32
PRKCSH-202ENST00000585540 TBC1D10BQ4KMP7 808 aaPredicted RBP17.02■□□□□ 0.32
PRKCSH-202ENST00000585540 SAMD7Q7Z3H4 446 aa17.02■□□□□ 0.32
PRKCSH-202ENST00000585540 DCPSQ96C86 337 aaKnown RBP17.02■□□□□ 0.32
PRKCSH-202ENST00000585540 MRIQ9BWK5 157 aa17.02■□□□□ 0.32
PRKCSH-202ENST00000585540 CREBZFQ9NS37 354 aa17.02■□□□□ 0.32
PRKCSH-202ENST00000585540 SUPT16HQ9Y5B9 1047 aaKnown RBP17.02■□□□□ 0.32
PRKCSH-202ENST00000585540 TRPM7Q96QT4 1865 aa17.01■□□□□ 0.31
PRKCSH-202ENST00000585540 ECM29Q5VYK3 1845 aa17.01■□□□□ 0.31
PRKCSH-202ENST00000585540 MYO1BO43795 1136 aa17.01■□□□□ 0.31
PRKCSH-202ENST00000585540 RAB11FIP3O75154 756 aa17.01■□□□□ 0.31
PRKCSH-202ENST00000585540 UQCRFS1P1P0C7P4 283 aa17.01■□□□□ 0.31
PRKCSH-202ENST00000585540 HIRAP54198 1017 aaPredicted RBP17.01■□□□□ 0.31
PRKCSH-202ENST00000585540 KIAA0825Q8IV33 1275 aa17.01■□□□□ 0.31
PRKCSH-202ENST00000585540 SERPINA10Q9UK55 444 aa17.01■□□□□ 0.31
PRKCSH-202ENST00000585540 TNNI3KQ59H18 835 aa17■□□□□ 0.31
PRKCSH-202ENST00000585540 MAP1SQ66K74 1059 aaPredicted RBP17■□□□□ 0.31
PRKCSH-202ENST00000585540 CCDC102BQ68D86 513 aa17■□□□□ 0.31
PRKCSH-202ENST00000585540 APOBEC3FQ8IUX4 373 aaKnown RBP17■□□□□ 0.31
PRKCSH-202ENST00000585540 SULF1Q8IWU6 871 aa17■□□□□ 0.31
PRKCSH-202ENST00000585540 KIF1BPQ96EK5 621 aa17■□□□□ 0.31
PRKCSH-202ENST00000585540 XAGE2Q96GT9 111 aa17■□□□□ 0.31
PRKCSH-202ENST00000585540 FPGT-TNNI3KV9GXZ4 949 aa17■□□□□ 0.31
PRKCSH-202ENST00000585540 TMEM88BA6NKF7 163 aa16.99■□□□□ 0.31
PRKCSH-202ENST00000585540 DLGAP5Q15398 846 aa16.99■□□□□ 0.31
PRKCSH-202ENST00000585540 CCDC158Q5M9N0 1113 aa16.99■□□□□ 0.31
PRKCSH-202ENST00000585540 GORABQ5T7V8 394 aa16.99■□□□□ 0.31
PRKCSH-202ENST00000585540 CERS5Q8N5B7 392 aa16.99■□□□□ 0.31
PRKCSH-202ENST00000585540 ZBED3Q96IU2 234 aaPredicted RBP16.99■□□□□ 0.31
PRKCSH-202ENST00000585540 ZNF512BQ96KM6 892 aaPredicted RBP16.99■□□□□ 0.31
PRKCSH-202ENST00000585540 GGA3Q9NZ52 723 aa16.99■□□□□ 0.31
PRKCSH-202ENST00000585540 SHTN1A0MZ66 631 aa16.98■□□□□ 0.31
PRKCSH-202ENST00000585540 WNT10BO00744 389 aa16.98■□□□□ 0.31
PRKCSH-202ENST00000585540 ARID4AP29374 1257 aaPredicted RBP16.98■□□□□ 0.31
PRKCSH-202ENST00000585540 SCARF1Q14162 830 aa16.98■□□□□ 0.31
PRKCSH-202ENST00000585540 NEUROD6Q96NK8 337 aa16.98■□□□□ 0.31
PRKCSH-202ENST00000585540 CRBNQ96SW2 442 aa16.98■□□□□ 0.31
PRKCSH-202ENST00000585540 TTF2Q9UNY4 1162 aaKnown RBP16.98■□□□□ 0.31
PRKCSH-202ENST00000585540 PPP2R3BQ9Y5P8 575 aa16.98■□□□□ 0.31
PRKCSH-202ENST00000585540 PHKA1P46020 1223 aa16.97■□□□□ 0.31
PRKCSH-202ENST00000585540 TIMM10P62072 90 aa16.97■□□□□ 0.31
PRKCSH-202ENST00000585540 CHAF1AQ13111 956 aaPredicted RBP16.97■□□□□ 0.31
PRKCSH-202ENST00000585540 RBM26Q5T8P6 1007 aaKnown RBP16.97■□□□□ 0.31
PRKCSH-202ENST00000585540 SPTY2D1Q68D10 685 aaPredicted RBP16.97■□□□□ 0.31
PRKCSH-202ENST00000585540 KRT26Q7Z3Y9 468 aa16.97■□□□□ 0.31
PRKCSH-202ENST00000585540 SLF2Q8IX21 1173 aa16.97■□□□□ 0.31
PRKCSH-202ENST00000585540 MXD3Q9BW11 206 aa16.97■□□□□ 0.31
PRKCSH-202ENST00000585540 SPDYE2BA6NHP3 402 aa16.96■□□□□ 0.31
PRKCSH-202ENST00000585540 EGFRP00533 1210 aa16.96■□□□□ 0.31
PRKCSH-202ENST00000585540 SPDYE6P0CI01 402 aa16.96■□□□□ 0.31
PRKCSH-202ENST00000585540 TNFAIP1Q13829 316 aa16.96■□□□□ 0.31
PRKCSH-202ENST00000585540 CFAP100Q494V2 611 aa16.96■□□□□ 0.31
PRKCSH-202ENST00000585540 TMED8Q6PL24 325 aaPredicted RBP16.96■□□□□ 0.31
PRKCSH-202ENST00000585540 HHIPL2Q6UWX4 724 aa16.96■□□□□ 0.31
PRKCSH-202ENST00000585540 CLASRPQ8N2M8 674 aaKnown RBP16.96■□□□□ 0.31
PRKCSH-202ENST00000585540 TEKT1Q969V4 418 aa16.96■□□□□ 0.31
PRKCSH-202ENST00000585540 FKBP1BP68106 108 aa16.95■□□□□ 0.3
PRKCSH-202ENST00000585540 ANGEL2Q5VTE6 544 aaKnown RBP16.95■□□□□ 0.3
PRKCSH-202ENST00000585540 RHPN1Q8TCX5 695 aa16.95■□□□□ 0.3
PRKCSH-202ENST00000585540 HHIPL1Q96JK4 782 aa16.95■□□□□ 0.3
PRKCSH-202ENST00000585540 LDHBP07195 334 aaKnown RBP16.94■□□□□ 0.3
PRKCSH-202ENST00000585540 ADORA1P30542 326 aa16.94■□□□□ 0.3
PRKCSH-202ENST00000585540 CRKP46108 304 aa16.94■□□□□ 0.3
PRKCSH-202ENST00000585540 RASGRF1Q13972 1273 aa16.94■□□□□ 0.3
PRKCSH-202ENST00000585540 TTC39AQ5SRH9 613 aa16.94■□□□□ 0.3
PRKCSH-202ENST00000585540 SIRT2Q8IXJ6 389 aa16.94■□□□□ 0.3
PRKCSH-202ENST00000585540 GLIS2Q9BZE0 524 aaPredicted RBP16.94■□□□□ 0.3
PRKCSH-202ENST00000585540 IQSEC3Q9UPP2 1182 aaPredicted RBP16.94■□□□□ 0.3
PRKCSH-202ENST00000585540 EXOC6BQ9Y2D4 811 aa16.94■□□□□ 0.3
PRKCSH-202ENST00000585540 F8W031 263 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms