RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 NPHS2Q9NP85 383 aa7.91□□□□□ -1.14
SMAD4-203ENST00000585448 SOX13Q9UN79 622 aa7.91□□□□□ -1.14
SMAD4-203ENST00000585448 ACPPP15309 386 aa7.9□□□□□ -1.14
SMAD4-203ENST00000585448 CDK11BP21127 795 aaKnown RBP7.9□□□□□ -1.14
SMAD4-203ENST00000585448 CDC27P30260 824 aa7.9□□□□□ -1.14
SMAD4-203ENST00000585448 RAC1P63000 192 aa7.9□□□□□ -1.14
SMAD4-203ENST00000585448 PTPN12Q05209 780 aaKnown RBP7.9□□□□□ -1.14
SMAD4-203ENST00000585448 TRIM28Q13263 835 aaKnown RBP7.9□□□□□ -1.14
SMAD4-203ENST00000585448 ALG1LQ6GMV1 187 aa7.9□□□□□ -1.14
SMAD4-203ENST00000585448 NPAS4Q8IUM7 802 aa7.9□□□□□ -1.14
SMAD4-203ENST00000585448 BSNDQ8WZ55 320 aa7.9□□□□□ -1.14
SMAD4-203ENST00000585448 ANP32BQ92688 251 aaKnown RBP7.9□□□□□ -1.14
SMAD4-203ENST00000585448 TCF12Q99081 682 aa7.9□□□□□ -1.14
SMAD4-203ENST00000585448 CHMP4BQ9H444 224 aaKnown RBP7.9□□□□□ -1.14
SMAD4-203ENST00000585448 PPME1Q9Y570 386 aa7.9□□□□□ -1.14
SMAD4-203ENST00000585448 PNMA6FA0A0J9YX94 578 aa7.89□□□□□ -1.15
SMAD4-203ENST00000585448 ANKRD33BA6NCL7 494 aa7.89□□□□□ -1.15
SMAD4-203ENST00000585448 TRAPPC3LQ5T215 181 aa7.89□□□□□ -1.15
SMAD4-203ENST00000585448 L1TD1Q5T7N2 865 aaKnown RBP7.89□□□□□ -1.15
SMAD4-203ENST00000585448 UTP14CQ5TAP6 766 aaKnown RBP7.89□□□□□ -1.15
SMAD4-203ENST00000585448 GDF6Q6KF10 455 aaPredicted RBP7.89□□□□□ -1.15
SMAD4-203ENST00000585448 ADAMTSL4Q6UY14 1074 aa7.89□□□□□ -1.15
SMAD4-203ENST00000585448 FBXO11Q86XK2 927 aa7.89□□□□□ -1.15
SMAD4-203ENST00000585448 IL22RA1Q8N6P7 574 aa7.89□□□□□ -1.15
SMAD4-203ENST00000585448 LATS2Q9NRM7 1088 aa7.89□□□□□ -1.15
SMAD4-203ENST00000585448 TRAK1Q9UPV9 953 aa7.89□□□□□ -1.15
SMAD4-203ENST00000585448 TM4SF5O14894 197 aa7.88□□□□□ -1.15
SMAD4-203ENST00000585448 EIF4EBP3O60516 100 aaPredicted RBP7.88□□□□□ -1.15
SMAD4-203ENST00000585448 POLR3DP05423 398 aaPredicted RBP7.88□□□□□ -1.15
SMAD4-203ENST00000585448 P4HBP07237 508 aaKnown RBP7.88□□□□□ -1.15
SMAD4-203ENST00000585448 ITPKAP23677 461 aa7.88□□□□□ -1.15
SMAD4-203ENST00000585448 DMRTC2Q8IXT2 367 aaPredicted RBP7.88□□□□□ -1.15
SMAD4-203ENST00000585448 TMEM151AQ8N4L1 468 aa7.88□□□□□ -1.15
SMAD4-203ENST00000585448 FRMD6Q96NE9 622 aa7.88□□□□□ -1.15
SMAD4-203ENST00000585448 NACC1Q96RE7 527 aa7.88□□□□□ -1.15
SMAD4-203ENST00000585448 SRCIN1Q9C0H9 1055 aa7.88□□□□□ -1.15
SMAD4-203ENST00000585448 FAM177BA6PVY3 158 aa7.87□□□□□ -1.15
SMAD4-203ENST00000585448 H3BRJ5 948 aa7.87□□□□□ -1.15
SMAD4-203ENST00000585448 GIPC1O14908 333 aa7.87□□□□□ -1.15
SMAD4-203ENST00000585448 GDF11O95390 407 aa7.87□□□□□ -1.15
SMAD4-203ENST00000585448 RGS3P49796 1198 aa7.87□□□□□ -1.15
SMAD4-203ENST00000585448 ATP2B2Q01814 1243 aa7.87□□□□□ -1.15
SMAD4-203ENST00000585448 SETDB1Q15047 1291 aa7.87□□□□□ -1.15
SMAD4-203ENST00000585448 HHIPQ96QV1 700 aa7.87□□□□□ -1.15
SMAD4-203ENST00000585448 SOX17Q9H6I2 414 aaPredicted RBP7.87□□□□□ -1.15
SMAD4-203ENST00000585448 LIN7BQ9HAP6 207 aa7.87□□□□□ -1.15
SMAD4-203ENST00000585448 OSGEPQ9NPF4 335 aa7.87□□□□□ -1.15
SMAD4-203ENST00000585448 KRBA1A5PL33 1030 aa7.86□□□□□ -1.15
SMAD4-203ENST00000585448 DLL1O00548 723 aa7.86□□□□□ -1.15
SMAD4-203ENST00000585448 DEAF1O75398 565 aaPredicted RBP7.86□□□□□ -1.15
SMAD4-203ENST00000585448 EPHA1P21709 976 aa7.86□□□□□ -1.15
SMAD4-203ENST00000585448 MAPK8P45983 427 aa7.86□□□□□ -1.15
SMAD4-203ENST00000585448 CABP4P57796 275 aa7.86□□□□□ -1.15
SMAD4-203ENST00000585448 PIP4K2BP78356 416 aa7.86□□□□□ -1.15
SMAD4-203ENST00000585448 TMCO4Q5TGY1 634 aa7.86□□□□□ -1.15
SMAD4-203ENST00000585448 MTERF4Q7Z6M4 381 aaKnown RBP7.86□□□□□ -1.15
SMAD4-203ENST00000585448 KLHL23Q8NBE8 558 aa7.86□□□□□ -1.15
SMAD4-203ENST00000585448 GLIS3Q8NEA6 775 aa7.86□□□□□ -1.15
SMAD4-203ENST00000585448 LACRTQ9GZZ8 138 aa7.86□□□□□ -1.15
SMAD4-203ENST00000585448 NLRP2Q9NX02 1062 aa7.86□□□□□ -1.15
SMAD4-203ENST00000585448 A0A096LPE4 126 aa7.85□□□□□ -1.15
SMAD4-203ENST00000585448 A0A1W2PPZ6 126 aa7.85□□□□□ -1.15
SMAD4-203ENST00000585448 TRPA1O75762 1119 aa7.85□□□□□ -1.15
SMAD4-203ENST00000585448 XRCC5P13010 732 aaKnown RBP7.85□□□□□ -1.15
SMAD4-203ENST00000585448 TNNT2P45379 298 aaPredicted RBP7.85□□□□□ -1.15
SMAD4-203ENST00000585448 GRM2Q14416 872 aa7.85□□□□□ -1.15
SMAD4-203ENST00000585448 TAF3Q5VWG9 929 aa7.85□□□□□ -1.15
SMAD4-203ENST00000585448 FAM117BQ6P1L5 589 aa7.85□□□□□ -1.15
SMAD4-203ENST00000585448 IGF2-ASQ6U949 168 aa7.85□□□□□ -1.15
SMAD4-203ENST00000585448 VN1R5Q7Z5H4 357 aa7.85□□□□□ -1.15
SMAD4-203ENST00000585448 ANKRD24Q8TF21 1146 aa7.85□□□□□ -1.15
SMAD4-203ENST00000585448 FRAT1Q92837 279 aaPredicted RBP7.85□□□□□ -1.15
SMAD4-203ENST00000585448 LENG1Q96BZ8 264 aaPredicted RBP7.85□□□□□ -1.15
SMAD4-203ENST00000585448 EHD4Q9H223 541 aa7.85□□□□□ -1.15
SMAD4-203ENST00000585448 ZFYVE1Q9HBF4 777 aa7.85□□□□□ -1.15
SMAD4-203ENST00000585448 ABCB6Q9NP58 842 aa7.85□□□□□ -1.15
SMAD4-203ENST00000585448 PRPF40AO75400 957 aaKnown RBP7.84□□□□□ -1.15
SMAD4-203ENST00000585448 GRIA4P48058 902 aa7.84□□□□□ -1.15
SMAD4-203ENST00000585448 EAPPQ56P03 285 aaPredicted RBP7.84□□□□□ -1.15
SMAD4-203ENST00000585448 RPS26P11Q5JNZ5 115 aaPredicted RBP7.84□□□□□ -1.15
SMAD4-203ENST00000585448 FBXO33Q7Z6M2 555 aa7.84□□□□□ -1.15
SMAD4-203ENST00000585448 EPS8L3Q8TE67 593 aaKnown RBP7.84□□□□□ -1.15
SMAD4-203ENST00000585448 C9orf172C9J069 976 aa7.83□□□□□ -1.16
SMAD4-203ENST00000585448 FSCN2O14926 492 aa7.83□□□□□ -1.16
SMAD4-203ENST00000585448 LDHBP07195 334 aaKnown RBP7.83□□□□□ -1.16
SMAD4-203ENST00000585448 NRG1Q02297 640 aaPredicted RBP7.83□□□□□ -1.16
SMAD4-203ENST00000585448 CLEC4MQ9H2X3 399 aaPredicted RBP7.83□□□□□ -1.16
SMAD4-203ENST00000585448 RRAGDQ9NQL2 400 aaPredicted RBP7.83□□□□□ -1.16
SMAD4-203ENST00000585448 SH2B1Q9NRF2 756 aaPredicted RBP7.83□□□□□ -1.16
SMAD4-203ENST00000585448 TMEM238LA0A1B0GVL6 79 aa7.82□□□□□ -1.16
SMAD4-203ENST00000585448 GADD45BO75293 160 aaPredicted RBP7.82□□□□□ -1.16
SMAD4-203ENST00000585448 APBA3O96018 575 aa7.82□□□□□ -1.16
SMAD4-203ENST00000585448 ESRRAP11474 423 aaPredicted RBP7.82□□□□□ -1.16
SMAD4-203ENST00000585448 SELPP16109 830 aa7.82□□□□□ -1.16
SMAD4-203ENST00000585448 TERF1P54274 439 aa7.82□□□□□ -1.16
SMAD4-203ENST00000585448 PLA2G4EQ3MJ16 856 aa7.82□□□□□ -1.16
SMAD4-203ENST00000585448 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.82□□□□□ -1.16
SMAD4-203ENST00000585448 TMEM130Q8N3G9 435 aa7.82□□□□□ -1.16
SMAD4-203ENST00000585448 BCO2Q9BYV7 579 aa7.82□□□□□ -1.16
SMAD4-203ENST00000585448 ZNF576Q9H609 170 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms